Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p11500 Brassica napus
A08p25950 Brassica napus
A09p38100 Brassica napus
Aa31LG9G13430 Aethionema arabicum
Aa31sc146G70 Aethionema arabicum
Actinidia09611 Actinidia chinensis
Actinidia22133 Actinidia chinensis
Actinidia34010 Actinidia chinensis
Actinidia37736 Actinidia chinensis
Ah.02g128980 Amaranthus hybridus
Ah.03g135770 Amaranthus hybridus
AL1G41560 Arabidopsis lyrata
AL4G29170 Arabidopsis lyrata
Aqoxy3G01744 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3FT6ZD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.98E6B7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8XRWE Arachis hypogaea
AT1G28050 Arabidopsis thaliana
AT2G33500 Arabidopsis thaliana
ATR0582G038 Amborella trichopoda
ATR0582G183 Amborella trichopoda
Atru.chr11.2401 Acer truncatum
Atru.chr6.2629 Acer truncatum
AUR62005692 Chenopodium quinoa
AUR62028867 Chenopodium quinoa
AUR62037849 Chenopodium quinoa
AUR62041089 Chenopodium quinoa
BcaB03g13961 Brassica carinata
BcaC05g26620 Brassica carinata
BcaC05g26808 Brassica carinata
BcaC06g35327 Brassica carinata
BolC3t19718H Brassica oleracea
BolC5t31396H Brassica oleracea
BolC7t42240H Brassica oleracea
BraA07t28939Z Brassica rapa
BraA08t34546Z Brassica rapa
BraA09t39323Z Brassica rapa
C03p74700 Brassica napus
C05p26710 Brassica napus
C07p17350 Brassica napus
CAN.G16.9 Capsicum annuum
CANSAT35G1693 Cannabis sativa
CARHR027500 Cardamine hirsuta
CARHR127510 Cardamine hirsuta
Carub.0004s1513 Capsella rubella
Ca_08115_v3 Cicer arietinum L.
Cc11_g17460 Coffea canephora
CDE02G1405 Ceratophyllum demersum
CDE06G1024 Ceratophyllum demersum
CDE06G2447 Ceratophyllum demersum
Cfa009414 Carpinus fangiana
Ciclev10015595m.g Citrus clementina
Ciclev10033431m.g Citrus clementina
CiPaw.05G104100 Carya illinoinensis
CiPaw.06G107400 Carya illinoinensis
ClCG07G015280 Citrullus lanatus
COL.COLO4_13201 Corchorus olitorius
COL.COLO4_13331 Corchorus olitorius
Cpa.g.sc123.53 Carica papaya
CsaV3_4G002870 Cucumis sativus L.
CSS0007579 Camellia sinensis var. sinensis
DCAR_024639 Daucus carota
Dinv05268 Davidia involucrata
Dinv33297 Davidia involucrata
Duzib052G0302 Durio zibethinus
Duzib052G0627 Durio zibethinus
Duzib147G1385 Durio zibethinus
Duzib187G0624 Durio zibethinus
Duzib248G0015 Durio zibethinus
ECA233G2961 Erigeron canadensis
ECA246G3456 Erigeron canadensis
EL10Ac6g13377 Beta vulgaris
EL10Ac6g13579 Beta vulgaris
Eucgr.B03543 Eucalyptus grandis
Eucgr.H03381 Eucalyptus grandis
FAN07G0571 Fragaria x ananassa
FAN12G1976 Fragaria x ananassa
FAN17G0008 Fragaria x ananassa
FvH4_4g23090 Fragaria vesca
Glyma.16G050900 Glycine max
Glyma.19G099700 Glycine max
Gohir.A01G021400 Gossypium hirsutum
Gohir.A03G151100 Gossypium hirsutum
Gohir.A05G334900 Gossypium hirsutum
Gohir.D01G019800 Gossypium hirsutum
Gohir.D02G174100 Gossypium hirsutum
Gorai.002G022300 Gossypium raimondii
Gorai.005G195800 Gossypium raimondii
Gorai.012G083100 Gossypium raimondii
GSVIVG01000951001 Vitis vinifera
GSVIVG01033017001 Vitis vinifera
HanXRQChr08g0210141 Helianthus annuus
HanXRQChr15g0475781 Helianthus annuus
HanXRQChr17g0551561 Helianthus annuus
Haze_12472 Corylus avellana
Hma1.2p1_0459F.1_g157250 Hydrangea macrophylla
Hma1.2p1_0672F.1_g201080 Hydrangea macrophylla
Hma1.2p1_1544F.1_g289890 Hydrangea macrophylla
HPP92_011757 Vanilla planifolia
HPP92_011760 Vanilla planifolia
Hund12862 Selenicereus undatus
Hund25494 Selenicereus undatus
Hund28219 Selenicereus undatus
Hund28224 Selenicereus undatus
Lj1g0021723 Lotus japonicus
Lsat_1_v5_gn_0_37380 Lactuca sativa
Lsat_1_v5_gn_8_146440 Lactuca sativa
Manes.08G103500 Manihot esculenta
Manes.09G185700 Manihot esculenta
Manes.11G079100 Manihot esculenta
MBI11_g14283_MAGBIO Magnolia biondii
MD13G1125800 Malus domestica
MD16G1126400 Malus domestica
Medtr7g083540 Medicago truncatula
MELO3C017755.2 Cucumis melo
Migut.K01031 Erythranthe guttata
MSTRG.8040 Avicennia marina
Nitab4.5_0000340g0050 Nicotiana tabacum
Nitab4.5_0008442g0020 Nicotiana tabacum
Nn3g16333 Nelumbo nucifera
Nn3g16334 Nelumbo nucifera
Nn3g17414 Nelumbo nucifera
Nn3g17415 Nelumbo nucifera
Nn4g22196 Nelumbo nucifera
Nn8g40451 Nelumbo nucifera
Oeu003282.2 Olea europaea
Os08g0536300 Oryza sativa ssp. japonica
Os09g0509700 Oryza sativa ssp. japonica
Peaxi162Scf00128g01749 Petunia axillaris
PGR057G0006 Punica granatum
PGR119G1468 Punica granatum
PGSC0003DMG400025414 Solanum tuberosum
Phvul.001G087300 Phaseolus vulgaris
Potri.001G061800 Populus trichocarpa
Potri.001G323500 Populus trichocarpa
Potri.003G166000 Populus trichocarpa
Prupe.1G219800 Prunus persica
Psat3g094880 Pisum sativum
PSO017G2657 Papaver somniferum
PSO478G2952 Papaver somniferum
QL02p070168 Quercus lobata
QL02p070172 Quercus lobata
QL03p050519 Quercus lobata
RcHm_v2.0_Chr4g0429371 Rosa chinensis
Rhsim08G0040300 Rhododendron simsii
Sabra03G0121400 Salix brachista
Sabra16G0206200 Salix brachista
SalBow2G0626 Salvia bowleyana
SalBow2G1823 Salvia bowleyana
Sc14g0009210 Simmondsia chinensis
Sed0005852 Sechium edule
Sed0007287 Sechium edule
SEGI_07482 Sequoiadendron giganteum
SEGI_07563 Sequoiadendron giganteum
SEGI_07789 Sequoiadendron giganteum
SGA_v2.0_scaffold9G04797 Striga asiatica
Solyc05g024010.3 Solanum lycopersicum
Sopen05g018710 Solanum pennellii
Sp1g24230 Schrenkiella parvula
TAR371G0423 Trochodendron aralioides
TAR629G2853 Trochodendron aralioides
THA.LOC104814201 Tarenaya hassleriana
Thecc.02G196800 Theobroma cacao
Thecc.04G043800 Theobroma cacao
Thhalv10007673m.g Eutrema salsugineum
TPR.G5748 Trifolium pratense
TWI36G1693 Tripterygium wilfordii
TWI75G0998 Tripterygium wilfordii
unitig_22.g6384 Utricularia gibba
unitig_8.g2898 Utricularia gibba
unitig_8.g3122 Utricularia gibba
vmacro16083 Vaccinium macrocarpon
vmacro18370 Vaccinium macrocarpon
VMungo1383G2810 Vigna mungo
Zm00001eb036970 Zea mays

User provided reference genes

Program Settings