Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28820 Brassica napus
Aa31LG9G11890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.826 Anthoceros agrestis
Actinidia03532 Actinidia chinensis
Actinidia29370 Actinidia chinensis
Ah.05g170410 Amaranthus hybridus
AL6G43920 Arabidopsis lyrata
Aqoxy5G01863 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6B58CR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DBA4ID Arachis hypogaea
AT4G10110 Arabidopsis thaliana
ATR1089G108 Amborella trichopoda
Atru.chr13.2533 Acer truncatum
AUR62013386 Chenopodium quinoa
AUR62038537 Chenopodium quinoa
BcaB01g01452 Brassica carinata
BcaC04g21018 Brassica carinata
BolC9t56494H Brassica oleracea
BraA09t38444Z Brassica rapa
C09p36620 Brassica napus
CANSAT01G1230 Cannabis sativa
CARHR261150 Cardamine hirsuta
Carub.0006s2868 Capsella rubella
Ca_10599_v3 Cicer arietinum L.
CBR_g955 Chara braunii
Cc10_g13970 Coffea canephora
Cc10_g16020 Coffea canephora
CDE02G3110 Ceratophyllum demersum
CDE04G3585 Ceratophyllum demersum
Cfa008054 Carpinus fangiana
Ciclev10022415m.g Citrus clementina
Ciclev10027481m.g Citrus clementina
CiPaw.03G013400 Carya illinoinensis
ClCG08G000830 Citrullus lanatus
ClCG08G001170 Citrullus lanatus
COL.COLO4_25136 Corchorus olitorius
Cpa.g.sc21.99 Carica papaya
CsaV3_5G039770 Cucumis sativus L.
CsaV3_5G039780 Cucumis sativus L.
CSS0035251 Camellia sinensis var. sinensis
DCAR_001170 Daucus carota
DCAR_010106 Daucus carota
DCAR_027538 Daucus carota
Dinv22125 Davidia involucrata
Duzib147G1304 Durio zibethinus
ECA246G4775 Erigeron canadensis
EL10Ac1g01277 Beta vulgaris
Eucgr.F02940 Eucalyptus grandis
FAN06G0896 Fragaria x ananassa
FAN11G1055 Fragaria x ananassa
FAN11G1445 Fragaria x ananassa
FAN20G1119 Fragaria x ananassa
FAN24G1959 Fragaria x ananassa
FAN27G2158 Fragaria x ananassa
FvH4_2g00580 Fragaria vesca
FvH4_3g25440 Fragaria vesca
Glyma.10G214800 Glycine max
Glyma.20G177100 Glycine max
Gohir.A05G374200 Gossypium hirsutum
Gohir.D04G041300 Gossypium hirsutum
Gorai.012G046700 Gossypium raimondii
GSVIVG01011528001 Vitis vinifera
GSVIVG01037209001 Vitis vinifera
HanXRQChr05g0150991 Helianthus annuus
HanXRQChr12g0369281 Helianthus annuus
Haze_13971 Corylus avellana
Hma1.2p1_1248F.1_g270250 Hydrangea macrophylla
HPP92_004500 Vanilla planifolia
Hund26941 Selenicereus undatus
Lalb_Chr02g0141881 Lupinus albus
Lj5g0005523 Lotus japonicus
Lj7P418T16 Lonicera japonica
Lsat_1_v5_gn_6_111041 Lactuca sativa
Lsat_1_v5_gn_7_27180 Lactuca sativa
Lsat_1_v5_gn_8_63781 Lactuca sativa
Manes.18G112700 Manihot esculenta
Mapoly0019s0080 Marchantia polymorpha
MBI03_g20879_MAGBIO Magnolia biondii
MBI10_g20271_MAGBIO Magnolia biondii
MBI17_g19026_MAGBIO Magnolia biondii
MBI18_g04721_MAGBIO Magnolia biondii
MD10G1003200 Malus domestica
Medtr1g096170 Medicago truncatula
MELO3C022158.2 Cucumis melo
MELO3C033524.2 Cucumis melo
Migut.C01393 Erythranthe guttata
MSTRG.1604 Avicennia marina
MSTRG.25500 Avicennia marina
Nitab4.5_0000009g0400 Nicotiana tabacum
Nitab4.5_0001202g0010 Nicotiana tabacum
Nitab4.5_0005094g0010 Nicotiana tabacum
Nn5g27336 Nelumbo nucifera
Oeu028627.2 Olea europaea
Os05g0427300 Oryza sativa ssp. japonica
Peaxi162Scf00078g00928 Petunia axillaris
PGR042G1493 Punica granatum
PGSC0003DMG400026862 Solanum tuberosum
Phvul.007G091200 Phaseolus vulgaris
Potri.019G069000 Populus trichocarpa
Prupe.8G005800 Prunus persica
Psat6g186320 Pisum sativum
PSO210G0567 Papaver somniferum
PSO761G0643 Papaver somniferum
QL09p001675 Quercus lobata
RcHm_v2.0_Chr6g0251031 Rosa chinensis
RcHm_v2.0_Chr6g0280021 Rosa chinensis
Rhsim02G0081700 Rhododendron simsii
Sabra19G0082500 Salix brachista
SalBow7G2433 Salvia bowleyana
Sc10g0006520 Simmondsia chinensis
Sed0003271 Sechium edule
Sed0024898 Sechium edule
SEGI_10411 Sequoiadendron giganteum
SEGI_14755 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32634 Striga asiatica
SHI01632 Sapria himalayana
SHI03434 Sapria himalayana
SHI09697 Sapria himalayana
SHI12193 Sapria himalayana
SHI13269 Sapria himalayana
SHI15221 Sapria himalayana
SHI15762 Sapria himalayana
SHI15886 Sapria himalayana
SHI16150 Sapria himalayana
SHI16558 Sapria himalayana
SHI16809 Sapria himalayana
SHI17604 Sapria himalayana
SHI19852 Sapria himalayana
SHI20166 Sapria himalayana
SHI20281 Sapria himalayana
SHI22499 Sapria himalayana
SHI22734 Sapria himalayana
SHI24738 Sapria himalayana
SHI25304 Sapria himalayana
SHI27587 Sapria himalayana
SHI29471 Sapria himalayana
SHI31989 Sapria himalayana
SHI34947 Sapria himalayana
SHI36014 Sapria himalayana
SHI37949 Sapria himalayana
SHI40358 Sapria himalayana
SHI45198 Sapria himalayana
SHI45438 Sapria himalayana
SHI47005 Sapria himalayana
SHI47009 Sapria himalayana
SHI47059 Sapria himalayana
SHI48034 Sapria himalayana
SHI49925 Sapria himalayana
SHI50134 Sapria himalayana
SHI51464 Sapria himalayana
SHI52029 Sapria himalayana
SHI53439 Sapria himalayana
SHI53632 Sapria himalayana
SHI53701 Sapria himalayana
SHI54185 Sapria himalayana
SMO239G0046 Selaginella moellendorffii
SMO307G0014 Selaginella moellendorffii
SMO307G0019 Selaginella moellendorffii
Solyc10g081990.1 Solanum lycopersicum
Solyc11g039950.3 Solanum lycopersicum
Sopen11g016790 Solanum pennellii
Sp6g07310 Schrenkiella parvula
TAR200G0001 Trochodendron aralioides
TAR633G0350 Trochodendron aralioides
TAR633G2018 Trochodendron aralioides
THA.LOC104815789 Tarenaya hassleriana
Thecc.04G023200 Theobroma cacao
Thecc.08G180600 Theobroma cacao
Thhalv10029015m.g Eutrema salsugineum
TPR.G1761 Trifolium pratense
TWI12G1089 Tripterygium wilfordii
TWI75G0838 Tripterygium wilfordii
unitig_749.g13869 Utricularia gibba
VMungo0720G2352 Vigna mungo
Zm00001eb145960 Zea mays

User provided reference genes

Program Settings