Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10210 Brassica napus
A10p11770 Brassica napus
Aa31LG3G10490 Aethionema arabicum
Actinidia05162 Actinidia chinensis
Actinidia10692 Actinidia chinensis
Actinidia35303 Actinidia chinensis
Ah.04g165190 Amaranthus hybridus
Ah.06g183230 Amaranthus hybridus
AL8G29910 Arabidopsis lyrata
Aqoxy1G03844 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GYU1HX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SIF99T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SKE74K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SRRR95 Arachis hypogaea
AT5G54540 Arabidopsis thaliana
ATR0804G047 Amborella trichopoda
AUR62029272 Chenopodium quinoa
AUR62041149 Chenopodium quinoa
BcaB05g22143 Brassica carinata
BcaB08g35813 Brassica carinata
BcaC03g14305 Brassica carinata
BcaC04g20329 Brassica carinata
BolC2t07792H Brassica oleracea
BolC9t57359H Brassica oleracea
BraA02t06092Z Brassica rapa
BraA10t43276Z Brassica rapa
C02p16910 Brassica napus
C09p44880 Brassica napus
CAN.G1160.11 Capsicum annuum
CAN.G1207.10 Capsicum annuum
CAN.G183.13 Capsicum annuum
CAN.G362.43 Capsicum annuum
CAN.G64.40 Capsicum annuum
CAN.G777.9 Capsicum annuum
CAN.G935.4 Capsicum annuum
CAN.G952.3 Capsicum annuum
CANSAT11G1059 Cannabis sativa
CARHR267820 Cardamine hirsuta
Carub.0008s1482 Capsella rubella
Ca_18832_v3 Cicer arietinum L.
Ca_30091_v3 Cicer arietinum L.
Cc05_g12980 Coffea canephora
CDE05G3612 Ceratophyllum demersum
CDE05G3666 Ceratophyllum demersum
Cfa020471 Carpinus fangiana
Cfa021072 Carpinus fangiana
Ciclev10008955m.g Citrus clementina
CiPaw.12G124700 Carya illinoinensis
ClCG05G014990 Citrullus lanatus
ClCG10G006140 Citrullus lanatus
COL.COLO4_09535 Corchorus olitorius
Cpa.g.c47761 Carica papaya
Cpa.g.sc80.126 Carica papaya
CsaV3_3G005690 Cucumis sativus L.
CsaV3_3G022650 Cucumis sativus L.
CSS0046033 Camellia sinensis var. sinensis
CSS0048456 Camellia sinensis var. sinensis
DCAR_008683 Daucus carota
DCAR_010006 Daucus carota
DCAR_022502 Daucus carota
Dinv02831 Davidia involucrata
Dinv17347 Davidia involucrata
Dinv22328 Davidia involucrata
Duzib170G0031 Durio zibethinus
Duzib213G0276 Durio zibethinus
ECA236G3199 Erigeron canadensis
EL10Ac4g08014 Beta vulgaris
Eucgr.F03390 Eucalyptus grandis
FAN11G1553 Fragaria x ananassa
FAN16G3040 Fragaria x ananassa
FAN21G0547 Fragaria x ananassa
FAN25G3758 Fragaria x ananassa
FvH4_3g21510 Fragaria vesca
Glyma.06G262900 Glycine max
Glyma.12G139800 Glycine max
Glyma.12G216500 Glycine max
Glyma.13G284700 Glycine max
Gohir.A11G281600 Gossypium hirsutum
Gohir.A11G281650 Gossypium hirsutum
Gohir.A13G142900 Gossypium hirsutum
Gohir.D11G294200 Gossypium hirsutum
Gohir.D11G294233 Gossypium hirsutum
Gohir.D13G147500 Gossypium hirsutum
Gorai.007G317200 Gossypium raimondii
Gorai.007G317300 Gossypium raimondii
Gorai.013G165300 Gossypium raimondii
GSVIVG01014549001 Vitis vinifera
HanXRQChr11g0332121 Helianthus annuus
Haze_09572 Corylus avellana
HPP92_004148 Vanilla planifolia
HPP92_005894 Vanilla planifolia
Hund02157 Selenicereus undatus
Hund10467 Selenicereus undatus
Hund11508 Selenicereus undatus
Hund23360 Selenicereus undatus
Lalb_Chr01g0006261 Lupinus albus
Lalb_Chr22g0357311 Lupinus albus
Lj1A861T58 Lonicera japonica
Lj3g0010292 Lotus japonicus
Lj3g0010893 Lotus japonicus
Lj8A163G39 Lonicera japonica
Lsat_1_v5_gn_2_59361 Lactuca sativa
Lsat_1_v5_gn_7_107821 Lactuca sativa
Manes.15G079400 Manihot esculenta
MBI18_g38396_MAGBIO Magnolia biondii
MD03G1215500 Malus domestica
MD11G1230100 Malus domestica
Medtr4g081550 Medicago truncatula
MELO3C016604.2 Cucumis melo
MELO3C018156.2 Cucumis melo
Migut.H01878 Erythranthe guttata
Migut.M01831 Erythranthe guttata
MSTRG.14400 Avicennia marina
MSTRG.6876 Avicennia marina
Nitab4.5_0000552g0100 Nicotiana tabacum
Nitab4.5_0003052g0050 Nicotiana tabacum
Nn1g06911 Nelumbo nucifera
Oeu005438.1 Olea europaea
Oeu052334.1 Olea europaea
Oeu052335.1 Olea europaea
Oeu052338.1 Olea europaea
Oeu052339.1 Olea europaea
Os08g0179900 Oryza sativa ssp. japonica
Peaxi162Scf01365g00027 Petunia axillaris
PGR031G0981 Punica granatum
Phvul.005G089400 Phaseolus vulgaris
Phvul.011G146700 Phaseolus vulgaris
Potri.001G410100 Populus trichocarpa
Potri.011G130000 Populus trichocarpa
Prupe.4G197300 Prunus persica
Prupe.5G070000 Prunus persica
Psat7g160280 Pisum sativum
PSO339G6399 Papaver somniferum
PSO384G0968 Papaver somniferum
PSO541G4862 Papaver somniferum
PSO541G5517 Papaver somniferum
PSO675G0068 Papaver somniferum
PSO675G5063 Papaver somniferum
QL08p014515 Quercus lobata
RcHm_v2.0_Chr5g0036951 Rosa chinensis
Rhsim06G0189000 Rhododendron simsii
Rhsim06G0190700 Rhododendron simsii
RhsimUnG0254800 Rhododendron simsii
Sabra11G0117400 Salix brachista
Sabra16G0281100 Salix brachista
SalBow7G4379 Salvia bowleyana
Sc03g0009430 Simmondsia chinensis
Sed0013156 Sechium edule
Sed0013484 Sechium edule
Sed0016497 Sechium edule
SGA_v2.0_scaffold70G23570 Striga asiatica
SGA_v2.0_scaffold70G23571 Striga asiatica
SGA_v2.0_scaffold9G05000 Striga asiatica
Solyc07g063870.3 Solanum lycopersicum
Sopen07g032000 Solanum pennellii
Sp6g16510 Schrenkiella parvula
TAR271G0005 Trochodendron aralioides
TAR271G0006 Trochodendron aralioides
TAR623G1765 Trochodendron aralioides
TAR627G0073 Trochodendron aralioides
THA.LOC104799894 Tarenaya hassleriana
Thecc.07G059100 Theobroma cacao
Thhalv10014255m.g Eutrema salsugineum
TPR.G34029 Trifolium pratense
TWI38G0390 Tripterygium wilfordii
TWI39G0875 Tripterygium wilfordii
unitig_746.g26819 Utricularia gibba
unitig_899.g15555 Utricularia gibba
vmacro09595 Vaccinium macrocarpon
vmacro11787 Vaccinium macrocarpon
VMungo0720G3086 Vigna mungo
VMungo1027G0001 Vigna mungo
VMungo1080G1564 Vigna mungo
VMungo1127G0850 Vigna mungo
Zm00001eb171810 Zea mays
Zm00001eb413050 Zea mays

User provided reference genes

Program Settings