Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04970 Brassica napus
A08p17740 Brassica napus
A08p17750 Brassica napus
Aa31sc290G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis
Actinidia25690 Actinidia chinensis
Actinidia25691 Actinidia chinensis
Actinidia27552 Actinidia chinensis
Ah.11g044300 Amaranthus hybridus
AL7G18350 Arabidopsis lyrata
Aqoxy7G04082 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea
AT4G33210 Arabidopsis thaliana
ATR0598G202 Amborella trichopoda
Atru.chr7.1848 Acer truncatum
AUR62009080 Chenopodium quinoa
AUR62020586 Chenopodium quinoa
BcaB03g12811 Brassica carinata
BcaC01g01002 Brassica carinata
BcaC01g01003 Brassica carinata
BcaC09g52132 Brassica carinata
BcaNung02160 Brassica carinata
BolC1t00522H Brassica oleracea
BolC3t20973H Brassica oleracea
BolC3t20974H Brassica oleracea
BolC7t46400H Brassica oleracea
BraA01t00479Z Brassica rapa
BraA03t15228Z Brassica rapa
BraA08t33724Z Brassica rapa
BraA08t33725Z Brassica rapa
C01p05420 Brassica napus
C03p86790 Brassica napus
C03p86800 Brassica napus
CAN.G881.1 Capsicum annuum
CANSAT25G1471 Cannabis sativa
CARHR241240 Cardamine hirsuta
Carub.0007s0725 Capsella rubella
Ca_13110_v3 Cicer arietinum L.
CBR_g11995 Chara braunii
Cc08_g01160 Coffea canephora
Cc08_g01170 Coffea canephora
CDE07G1686 Ceratophyllum demersum
Ciclev10007327m.g Citrus clementina
CiPaw.15G091900 Carya illinoinensis
CiPaw.16G068500 Carya illinoinensis
ClCG05G015740 Citrullus lanatus
COL.COLO4_21138 Corchorus olitorius
Cpa.g.sc126.25 Carica papaya
Cpa.g.sc126.26 Carica papaya
Cre12.g525600 Chlamydomonas reinhardtii
CsaV3_4G036040 Cucumis sativus L.
CSS0013734 Camellia sinensis var. sinensis
CSS0048906 Camellia sinensis var. sinensis
DCAR_001223 Daucus carota
DCAR_004379 Daucus carota
Dinv02138 Davidia involucrata
Dinv41842 Davidia involucrata
Duzib168G1968 Durio zibethinus
Duzib187G0791 Durio zibethinus
ECA236G0039 Erigeron canadensis
EL10Ac2g03782 Beta vulgaris
Eucgr.C03158 Eucalyptus grandis
FAN20G0071 Fragaria x ananassa
FAN24G1820 Fragaria x ananassa
FAN27G2597 Fragaria x ananassa
FvH4_2g30970 Fragaria vesca
Glyma.04G055700 Glycine max
Glyma.06G055800 Glycine max
Glyma.14G098900 Glycine max
Glyma.17G225800 Glycine max
Gohir.A06G081600 Gossypium hirsutum
Gohir.A06G081780 Gossypium hirsutum
Gohir.A07G019700 Gossypium hirsutum
Gohir.D06G083100 Gossypium hirsutum
Gohir.D07G019500 Gossypium hirsutum
Gorai.001G020200 Gossypium raimondii
Gorai.010G096600 Gossypium raimondii
GSVIVG01035469001 Vitis vinifera
HanXRQChr03g0065591 Helianthus annuus
HanXRQChr05g0135941 Helianthus annuus
HanXRQChr09g0261801 Helianthus annuus
Haze_18293 Corylus avellana
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla
HPP92_006154 Vanilla planifolia
Hund19422 Selenicereus undatus
Lalb_Chr08g0244821 Lupinus albus
Lalb_Chr22g0356231 Lupinus albus
Lalb_Chr23g0267971 Lupinus albus
Lj5g0007526 Lotus japonicus
Lj7A221G29 Lonicera japonica
Lsat_1_v5_gn_8_70661 Lactuca sativa
Manes.03G053433 Manihot esculenta
Manes.16G085600 Manihot esculenta
Mapoly0101s0054 Marchantia polymorpha
Mapoly0202s0013 Marchantia polymorpha
MBI13_g13882_MAGBIO Magnolia biondii
MBI13_g31962_MAGBIO Magnolia biondii
MBI19_g11832_MAGBIO Magnolia biondii
MD08G1071300 Malus domestica
MD15G1049900 Malus domestica
Medtr1g015450 Medicago truncatula
Medtr1g015480 Medicago truncatula
MELO3C016912.2 Cucumis melo
Migut.A00079 Erythranthe guttata
Migut.E01781 Erythranthe guttata
MSTRG.25985 Avicennia marina
Nitab4.5_0000446g0200 Nicotiana tabacum
Nitab4.5_0002831g0060 Nicotiana tabacum
Nn6g35614 Nelumbo nucifera
Nn8g38669 Nelumbo nucifera
Oeu022303.1 Olea europaea
Oeu028128.1 Olea europaea
Oeu036060.1 Olea europaea
Os10g0396400 Oryza sativa ssp. japonica
Os10g0396666 Oryza sativa ssp. japonica
Peaxi162Scf00486g01029 Petunia axillaris
PGR044G0665 Punica granatum
PGSC0003DMG400018806 Solanum tuberosum
Phvul.001G038700 Phaseolus vulgaris
Phvul.009G081900 Phaseolus vulgaris
Potri.006G220900 Populus trichocarpa
Potri.018G048700 Populus trichocarpa
Pp3c12_17410 Physcomitrium patens
Pp3c4_12360 Physcomitrium patens
Pp3c5_23900 Physcomitrium patens
Pp3c6_6070 Physcomitrium patens
Prupe.1G404200 Prunus persica
Psat3g079480 Pisum sativum
Psat5g114640 Pisum sativum
Psat5g213240 Pisum sativum
Psat6g022880 Pisum sativum
PSO135G0299 Papaver somniferum
PSO724G0454 Papaver somniferum
QL02p017002 Quercus lobata
RcHm_v2.0_Chr6g0311801 Rosa chinensis
Rhsim03G0063100 Rhododendron simsii
Sabra06G0170700 Salix brachista
Sabra18G0046400 Salix brachista
SalBow1G2799 Salvia bowleyana
SalBow4G2891 Salvia bowleyana
Sc09g0009810 Simmondsia chinensis
Sc09g0010110 Simmondsia chinensis
Sc23g0004200 Simmondsia chinensis
Sed0000287 Sechium edule
Sed0027838 Sechium edule
SEGI_01273 Sequoiadendron giganteum
SEGI_30451 Sequoiadendron giganteum
SGA_v2.0_scaffold163G37999 Striga asiatica
SGA_v2.0_scaffold169G38713 Striga asiatica
SGA_v2.0_scaffold64G21877 Striga asiatica
SMO238G0031 Selaginella moellendorffii
Solyc08g061820.3 Solanum lycopersicum
Sopen08g017250 Solanum pennellii
Sp7g30950 Schrenkiella parvula
TAR624G1180 Trochodendron aralioides
TAR626G0360 Trochodendron aralioides
TAR626G0824 Trochodendron aralioides
TAR636G3697 Trochodendron aralioides
THA.LOC104803705 Tarenaya hassleriana
Thecc.09G063300 Theobroma cacao
Thhalv10024312m.g Eutrema salsugineum
TPR.G38933 Trifolium pratense
TWI32G0253 Tripterygium wilfordii
TWI34G0168 Tripterygium wilfordii
TWI39G1239 Tripterygium wilfordii
unitig_4.g30332 Utricularia gibba
unitig_748.g8237 Utricularia gibba
vmacro07490 Vaccinium macrocarpon
VMungo0647G1341 Vigna mungo
VMungo0720G2633 Vigna mungo
VMungo1309G1038 Vigna mungo
Zm00001eb048660 Zea mays
Zm00001eb223490 Zea mays

User provided reference genes

Program Settings