Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09920 Brassica napus
A03p14290 Brassica napus
A10p12360 Brassica napus
Aa31LG3G10990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3056 Anthoceros agrestis
Actinidia05085 Actinidia chinensis
Actinidia08340 Actinidia chinensis
Actinidia08342 Actinidia chinensis
Actinidia32254 Actinidia chinensis
Actinidia32255 Actinidia chinensis
Ah.04g166010 Amaranthus hybridus
Ah.06g182830 Amaranthus hybridus
AL8G30560 Arabidopsis lyrata
AL989U10010 Arabidopsis lyrata
Aqoxy1G03123 Aquilegia oxysepala
Aqoxy435s001 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.09LR4A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0VB874 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MF778S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QFUU5V Arachis hypogaea
AT5G55060 Arabidopsis thaliana
ATR0794G053 Amborella trichopoda
Atru.chr2.3466 Acer truncatum
Atru.chr2.3467 Acer truncatum
Atru.chr2.3480 Acer truncatum
AUR62015810 Chenopodium quinoa
AUR62020408 Chenopodium quinoa
BcaB08g35869 Brassica carinata
BcaC01g06341 Brassica carinata
BcaC03g14270 Brassica carinata
BcaC04g20273 Brassica carinata
BolC2t07748H Brassica oleracea
BolC3t14087H Brassica oleracea
BolC9t57432H Brassica oleracea
BraA02t06056Z Brassica rapa
BraA03t10726Z Brassica rapa
BraA10t43329Z Brassica rapa
C02p16470 Brassica napus
C03p16670 Brassica napus
C09p45620 Brassica napus
CAN.G337.77 Capsicum annuum
CANSAT11G2014 Cannabis sativa
CANSAT11G2500 Cannabis sativa
CARHR268410 Cardamine hirsuta
Carub.0008s1533 Capsella rubella
Ca_06331_v3 Cicer arietinum L.
Ca_14751_v3 Cicer arietinum L.
Ca_30702_v3 Cicer arietinum L.
CBR_g52387 Chara braunii
Cc05_g13980 Coffea canephora
CDE05G0747 Ceratophyllum demersum
Cfa020319 Carpinus fangiana
Ciclev10007601m.g Citrus clementina
CiPaw.12G131400 Carya illinoinensis
ClCG10G004950 Citrullus lanatus
COL.COLO4_09683 Corchorus olitorius
Cpa.g.sc12.281 Carica papaya
CsaV3_3G004600 Cucumis sativus L.
CSS0024501 Camellia sinensis var. sinensis
DCAR_016715 Daucus carota
Dinv22250 Davidia involucrata
Dinv40771 Davidia involucrata
Duzib213G0248 Durio zibethinus
ECA236G1274 Erigeron canadensis
ECA246G3933 Erigeron canadensis
EL10Ac4g07774 Beta vulgaris
Eucgr.F00743 Eucalyptus grandis
Eucgr.I00588 Eucalyptus grandis
FAN11G3048 Fragaria x ananassa
FAN16G0031 Fragaria x ananassa
FAN21G1927 Fragaria x ananassa
FAN25G2752 Fragaria x ananassa
FAN25G2755 Fragaria x ananassa
FvH4_3g23020 Fragaria vesca
Glyma.02G292300 Glycine max
Glyma.08G319100 Glycine max
Glyma.14G022300 Glycine max
Glyma.15G187301 Glycine max
Glyma.18G094400 Glycine max
Gohir.A01G081200 Gossypium hirsutum
Gohir.A04G013800 Gossypium hirsutum
Gohir.D01G068300 Gossypium hirsutum
Gohir.D05G372500 Gossypium hirsutum
Gorai.002G090300 Gossypium raimondii
Gorai.009G440800 Gossypium raimondii
GSVIVG01037676001 Vitis vinifera
HanXRQChr05g0159431 Helianthus annuus
HanXRQChr11g0336391 Helianthus annuus
Haze_09703 Corylus avellana
Hma1.2p1_0235F.1_g098670 Hydrangea macrophylla
Hma1.2p1_0473F.1_g160045 Hydrangea macrophylla
Hma1.2p1_1567F.1_g291085 Hydrangea macrophylla
Hma1.2p1_2633F.1_g325795 Hydrangea macrophylla
HPP92_012415 Vanilla planifolia
Hund01974 Selenicereus undatus
Hund01976 Selenicereus undatus
Hund23230 Selenicereus undatus
Lalb_Chr04g0248331 Lupinus albus
Lalb_Chr15g0081441 Lupinus albus
Lalb_Chr17g0348531 Lupinus albus
Lj1A875G28 Lonicera japonica
Lj6g0020939 Lotus japonicus
LjContig00272g0017225 Lotus japonicus
Lsat_1_v5_gn_5_2920 Lactuca sativa
Lsat_1_v5_gn_5_2940 Lactuca sativa
Lsat_1_v5_gn_7_110060 Lactuca sativa
Manes.03G131600 Manihot esculenta
Manes.15G070100 Manihot esculenta
Mapoly0021s0054 Marchantia polymorpha
MBI02_g25402_MAGBIO Magnolia biondii
MD03G1198400 Malus domestica
MD11G1214500 Malus domestica
Medtr3g039910 Medicago truncatula
Medtr3g052790 Medicago truncatula
Medtr5g093230 Medicago truncatula
Medtr5g093270 Medicago truncatula
MELO3C014157.2 Cucumis melo
Migut.H01814 Erythranthe guttata
MSTRG.12984 Avicennia marina
Nitab4.5_0000328g0030 Nicotiana tabacum
Nitab4.5_0002287g0060 Nicotiana tabacum
Nn1g03482 Nelumbo nucifera
Nn1g07173 Nelumbo nucifera
Oeu034037.1 Olea europaea
Os07g0511000 Oryza sativa ssp. japonica
Peaxi162Scf00235g00421 Petunia axillaris
PGR031G3770 Punica granatum
PGSC0003DMG400022311 Solanum tuberosum
Phvul.006G046200 Phaseolus vulgaris
Phvul.008G269100 Phaseolus vulgaris
Potri.011G089300 Populus trichocarpa
Pp3c20_12230 Physcomitrium patens
Pp3c23_10600 Physcomitrium patens
Pp3c24_7080 Physcomitrium patens
PRCOL_00007277 Prasinoderma coloniale
Prupe.4G216600 Prunus persica
Psat0s3384g0040 Pisum sativum
Psat5g174680 Pisum sativum
PSO541G5896 Papaver somniferum
PSO675G6219 Papaver somniferum
QL08p009391 Quercus lobata
QL08p009425 Quercus lobata
RcHm_v2.0_Chr5g0040501 Rosa chinensis
Rhsim06G0219000 Rhododendron simsii
Sabra11G0093800 Salix brachista
Sc03g0008500 Simmondsia chinensis
Sc16g0005900 Simmondsia chinensis
Sed0001205 Sechium edule
Sed0002781 Sechium edule
SEGI_06285 Sequoiadendron giganteum
SEGI_27580 Sequoiadendron giganteum
SEGI_32065 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04338 Striga asiatica
SMO358G0516 Selaginella moellendorffii
Solyc07g064740.3 Solanum lycopersicum
Sopen07g032940 Solanum pennellii
Sp6g17000 Schrenkiella parvula
TAR624G0691 Trochodendron aralioides
THA.LOC104811616 Tarenaya hassleriana
THA.LOC104817673 Tarenaya hassleriana
Thecc.07G033300 Theobroma cacao
Thhalv10012904m.g Eutrema salsugineum
TPR.G1225 Trifolium pratense
TPR.G27744 Trifolium pratense
TPR.G29716 Trifolium pratense
TPR.G33786 Trifolium pratense
TPR.G36270 Trifolium pratense
TPR.G39743 Trifolium pratense
TWI38G0863 Tripterygium wilfordii
TWI39G0476 Tripterygium wilfordii
vmacro02222 Vaccinium macrocarpon
vmacro19326 Vaccinium macrocarpon
VMungo0540G0244 Vigna mungo
VMungo0647G2168 Vigna mungo
Zm00001eb062650 Zea mays
Zm00001eb322480 Zea mays

User provided reference genes

Program Settings