Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p18730 Brassica napus
A08p01870 Brassica napus
Aa31LG10G2090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis
Actinidia01882 Actinidia chinensis
Actinidia05634 Actinidia chinensis
Actinidia09679 Actinidia chinensis
Actinidia12813 Actinidia chinensis
Actinidia24031 Actinidia chinensis
Ah.06g184010 Amaranthus hybridus
AL1G61340 Arabidopsis lyrata
Aqoxy1G02432 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea
AT1G53000 Arabidopsis thaliana
ATR0605G309 Amborella trichopoda
ATR0730G188 Amborella trichopoda
ATR0730G237 Amborella trichopoda
Atru.chr2.2652 Acer truncatum
AUR62029379 Chenopodium quinoa
AUR62034260 Chenopodium quinoa
BcaB02g10966 Brassica carinata
BcaB04g17128 Brassica carinata
BcaB07g33367 Brassica carinata
BcaC01g01350 Brassica carinata
BcaC06g36757 Brassica carinata
BcaC08g43686 Brassica carinata
BcaC08g44025 Brassica carinata
BolC3t21419H Brassica oleracea
BolC6t36186H Brassica oleracea
BolC6t36614H Brassica oleracea
BolC7t40476H Brassica oleracea
BolC9t59438H Brassica oleracea
BraA05t20769Z Brassica rapa
BraA08t32239Z Brassica rapa
C03p90950 Brassica napus
C06p14350 Brassica napus
C07p00250 Brassica napus
C09p66180 Brassica napus
CAN.G1110.56 Capsicum annuum
CAN.G162.63 Capsicum annuum
CARHR043220 Cardamine hirsuta
Carub.0001s4215 Capsella rubella
Ca_12190_v3 Cicer arietinum L.
Ca_12192_v3 Cicer arietinum L.
Ca_30578_v3 Cicer arietinum L.
Ca_30580_v3 Cicer arietinum L.
CBR_g29613 Chara braunii
CBR_g31446 Chara braunii
Cc05_g12120 Coffea canephora
CDE10G1101 Ceratophyllum demersum
Cfa000456 Carpinus fangiana
Cfa020596 Carpinus fangiana
Ciclev10009061m.g Citrus clementina
CiPaw.09G059900 Carya illinoinensis
CiPaw.11G168500 Carya illinoinensis
ClCG10G006920 Citrullus lanatus
COL.COLO4_09397 Corchorus olitorius
Cpa.g.sc80.53 Carica papaya
CsaV3_3G006290 Cucumis sativus L.
CSS0007181 Camellia sinensis var. sinensis
CSS0031480 Camellia sinensis var. sinensis
DCAR_014380 Daucus carota
Dinv04311 Davidia involucrata
Dinv40557 Davidia involucrata
Duzib064G0003 Durio zibethinus
Duzib064G0004 Durio zibethinus
Duzib170G0119 Durio zibethinus
Duzib213G0989 Durio zibethinus
ECA238G0528 Erigeron canadensis
EL10Ac4g08152 Beta vulgaris
Eucgr.F01114 Eucalyptus grandis
Eucgr.F01118 Eucalyptus grandis
FAN11G0414 Fragaria x ananassa
FAN16G0735 Fragaria x ananassa
FAN21G2274 Fragaria x ananassa
FAN25G2093 Fragaria x ananassa
FvH4_3g20180 Fragaria vesca
Glyma.06G245100 Glycine max
Glyma.12G151500 Glycine max
Gohir.A04G029700 Gossypium hirsutum
Gohir.D05G357300 Gossypium hirsutum
Gorai.009G389800 Gossypium raimondii
GSVIVG01005203001 Vitis vinifera
GSVIVG01014351001 Vitis vinifera
HanXRQChr11g0328431 Helianthus annuus
Haze_06417 Corylus avellana
Haze_06421 Corylus avellana
Haze_06461 Corylus avellana
Haze_09417 Corylus avellana
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla
HPP92_021319 Vanilla planifolia
Hund02213 Selenicereus undatus
Lalb_Chr01g0006511 Lupinus albus
Lalb_Chr03g0030621 Lupinus albus
Lj1A1206T62 Lonicera japonica
Lj2g0024488 Lotus japonicus
Lj3g0002488 Lotus japonicus
Lj3g0013472 Lotus japonicus
Lj3g0015923 Lotus japonicus
Lj3g0026961 Lotus japonicus
Lj8A156T78 Lonicera japonica
Lj8A54T73 Lonicera japonica
Lj8C156T6 Lonicera japonica
Lsat_1_v5_gn_7_105160 Lactuca sativa
Lsat_1_v5_gn_7_21261 Lactuca sativa
Manes.03G110800 Manihot esculenta
Mapoly0026s0027 Marchantia polymorpha
MBI07_g32649_MAGBIO Magnolia biondii
MCO07G610 Micromonas commoda
MD03G1226400 Malus domestica
MD11G1244700 Malus domestica
Medtr1g057850 Medicago truncatula
MELO3C016515.2 Cucumis melo
Migut.M00813 Erythranthe guttata
MSTRG.15225 Avicennia marina
Nitab4.5_0000207g0160 Nicotiana tabacum
Nitab4.5_0001551g0080 Nicotiana tabacum
Nitab4.5_0002383g0120 Nicotiana tabacum
Nitab4.5_0003688g0100 Nicotiana tabacum
Nn1g04083 Nelumbo nucifera
Nn1g06558 Nelumbo nucifera
Oeu005415.1 Olea europaea
Oeu044430.1 Olea europaea
Oeu060549.1 Olea europaea
Os05g0561500 Oryza sativa ssp. japonica
Peaxi162Scf00027g02616 Petunia axillaris
Peaxi162Scf00069g01341 Petunia axillaris
PGR004G1265 Punica granatum
PGR083G0800 Punica granatum
PGSC0003DMG400025035 Solanum tuberosum
PGSC0003DMG402012419 Solanum tuberosum
Phvul.011G157900 Phaseolus vulgaris
Potri.001G400900 Populus trichocarpa
Potri.011G120100 Populus trichocarpa
Pp3c11_23350 Physcomitrium patens
Pp3c7_2170 Physcomitrium patens
Prupe.4G047000 Prunus persica
Prupe.4G183000 Prunus persica
Psat5g229040 Pisum sativum
PSO017G1411 Papaver somniferum
PSO017G7235 Papaver somniferum
PSO541G6182 Papaver somniferum
PSO675G7971 Papaver somniferum
QL05p040244 Quercus lobata
QL05p086088 Quercus lobata
QL08p021520 Quercus lobata
RcHm_v2.0_Chr5g0008351 Rosa chinensis
RcHm_v2.0_Chr5g0033991 Rosa chinensis
Rhsim06G0197600 Rhododendron simsii
Sabra11G0104500 Salix brachista
Sabra16G0263000 Salix brachista
SalBow8G0761 Salvia bowleyana
Sc07g0002580 Simmondsia chinensis
Sed0012787 Sechium edule
SEGI_36185 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13823 Striga asiatica
SGA_v2.0_scaffold73G24269 Striga asiatica
SMO196G0043 Selaginella moellendorffii
Solyc04g079010.1 Solanum lycopersicum
Solyc04g079020.4 Solanum lycopersicum
Solyc10g006980.3 Solanum lycopersicum
Sopen05g017440 Solanum pennellii
Sopen10g002890 Solanum pennellii
Sp1g39560 Schrenkiella parvula
TAR629G1246 Trochodendron aralioides
THA.LOC104818073 Tarenaya hassleriana
Thecc.07G083700 Theobroma cacao
Thhalv10011698m.g Eutrema salsugineum
TPR.G454 Trifolium pratense
TWI38G0676 Tripterygium wilfordii
TWI38G0767 Tripterygium wilfordii
unitig_899.g15563 Utricularia gibba
vmacro11847 Vaccinium macrocarpon
Zm00001eb343610 Zea mays

User provided reference genes

Program Settings