Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31csc549G20 Aethionema arabicum
Ah.00g237920 Amaranthus hybridus
Ah.01g011790 Amaranthus hybridus
Ah.10g028070 Amaranthus hybridus
AL3G44470 Arabidopsis lyrata
AL3G44640 Arabidopsis lyrata
Aqoxy163s002 Aquilegia oxysepala
Aqoxy1G02245 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BUQ0M3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WX3135 Arachis hypogaea
AT2G07768 Arabidopsis thaliana
ATMG00830 Arabidopsis thaliana
ATR1173G002 Amborella trichopoda
ATR1173G003 Amborella trichopoda
AUR62033936 Chenopodium quinoa
AUR62042333 Chenopodium quinoa
BcaC09g49580 Brassica carinata
BcaC09g49589 Brassica carinata
BcaC09g49594 Brassica carinata
BNapus_Darmor_BZH_scaffold_234p00030 Brassica napus
BolC1t03443H Brassica oleracea
BolC1t03452H Brassica oleracea
BolC1t03458H Brassica oleracea
BolC5t30954H Brassica oleracea
BolSC28t60306H Brassica oleracea
BolSC28t60363H Brassica oleracea
BolSC28t60383H Brassica oleracea
BolSC28t60416H Brassica oleracea
BraSC177t45753Z Brassica rapa
BraSC177t45761Z Brassica rapa
BraSC224t45815Z Brassica rapa
BraSC48t46228Z Brassica rapa
BraSC48t46252Z Brassica rapa
BraSC48t46298Z Brassica rapa
BraSC48t46316Z Brassica rapa
BraSC48t46350Z Brassica rapa
BraSC48t46351Z Brassica rapa
BraSC54t46361Z Brassica rapa
BraSC77t46622Z Brassica rapa
C01p34760 Brassica napus
C01p34860 Brassica napus
C05p22550 Brassica napus
CAN.G1001.41 Capsicum annuum
CAN.G124.8 Capsicum annuum
CAN.G134.19 Capsicum annuum
CAN.G1439.6 Capsicum annuum
CAN.G1439.7 Capsicum annuum
CAN.G1439.8 Capsicum annuum
CAN.G1576.3 Capsicum annuum
CAN.G497.18 Capsicum annuum
CANSAT16G0001 Cannabis sativa
CARHR283110 Cardamine hirsuta
CARHR283230 Cardamine hirsuta
CARHR287240 Cardamine hirsuta
CDE02G1256 Ceratophyllum demersum
CDE02G3531 Ceratophyllum demersum
Ciclev10003580m.g Citrus clementina
ClCG09G015160 Citrullus lanatus
COL.COLO4_36795 Corchorus olitorius
CsaV3_UNG210090 Cucumis sativus L.
DCAR_004797 Daucus carota
DCAR_031805 Daucus carota
DCAR_032038 Daucus carota
DCAR_032429 Daucus carota
Dinv06713 Davidia involucrata
ECA039G0028 Erigeron canadensis
Eucgr.C03075 Eucalyptus grandis
Gorai.001G160200 Gossypium raimondii
Gorai.013G137500 Gossypium raimondii
GSVIVG01004964001 Vitis vinifera
GSVIVG01006218001 Vitis vinifera
HanXRQChr01g0003471 Helianthus annuus
HanXRQChr01g0013391 Helianthus annuus
HanXRQChr01g0029691 Helianthus annuus
HanXRQChr04g0109071 Helianthus annuus
HanXRQChr08g0236011 Helianthus annuus
HanXRQChr09g0246391 Helianthus annuus
HanXRQChr11g0334171 Helianthus annuus
HanXRQChr11g0334181 Helianthus annuus
HanXRQChr14g0434351 Helianthus annuus
HanXRQChr17g0544011 Helianthus annuus
HanXRQChr17g0544021 Helianthus annuus
HanXRQMTg0579571 Helianthus annuus
Lalb_Chr00c29g0408271 Lupinus albus
Lalb_Chr11g0068271 Lupinus albus
Lalb_Chr22g0357821 Lupinus albus
Lalb_Chr22g0357831 Lupinus albus
Lj2P1232T100 Lonicera japonica
LjContig00315g0021149 Lotus japonicus
LjContig00439g0010231 Lotus japonicus
Lsat_1_v5_gn_4_139080 Lactuca sativa
Lsat_1_v5_gn_5_16100 Lactuca sativa
Lsat_1_v5_gn_5_16140 Lactuca sativa
Lsat_1_v5_gn_7_67781 Lactuca sativa
Lsat_1_v5_gn_7_99780 Lactuca sativa
Lsat_1_v5_gn_8_111800 Lactuca sativa
MBI05_g05347_MAGBIO Magnolia biondii
MBI19_g47479_MAGBIO Magnolia biondii
MD14G1092300 Malus domestica
Medtr0212s0020 Medicago truncatula
MSTRG.27795 Avicennia marina
Nitab4.5_0000128g0160 Nicotiana tabacum
Nitab4.5_0000172g1260 Nicotiana tabacum
Nitab4.5_0000172g1380 Nicotiana tabacum
Nitab4.5_0000592g0140 Nicotiana tabacum
Nitab4.5_0002589g0080 Nicotiana tabacum
Nitab4.5_0002888g0030 Nicotiana tabacum
Nitab4.5_0004300g0270 Nicotiana tabacum
Nitab4.5_0008535g0060 Nicotiana tabacum
Nitab4.5_0010936g0010 Nicotiana tabacum
Nitab4.5_0011099g0010 Nicotiana tabacum
Nitab4.5_0011099g0020 Nicotiana tabacum
Nn1g09973 Nelumbo nucifera
Nn1g10045 Nelumbo nucifera
Nn1g10116 Nelumbo nucifera
Nn3g20873 Nelumbo nucifera
Oeu008586.1 Olea europaea
Peaxi162Scf00707g00004 Petunia axillaris
Peaxi162Scf00720g00065 Petunia axillaris
Peaxi162Scf02040g00001 Petunia axillaris
PGR028G0013 Punica granatum
PGSC0003DMG400016897 Solanum tuberosum
PGSC0003DMG400047287 Solanum tuberosum
Psat4g179160 Pisum sativum
Psat6g195120 Pisum sativum
Psat7g150720 Pisum sativum
PSO135G0232 Papaver somniferum
PSO675G6716 Papaver somniferum
PSO782G0649 Papaver somniferum
QL02p008127 Quercus lobata
RcHm_v2.0_Chr6g0258021 Rosa chinensis
RcHm_v2.0_MTg0498851 Rosa chinensis
RhsimMtG0005400 Rhododendron simsii
SabraMtG0000900 Salix brachista
SalBow1G3009 Salvia bowleyana
Sc11g0004390 Simmondsia chinensis
Sc22g0004100 Simmondsia chinensis
SEGI_06792 Sequoiadendron giganteum
SEGI_30299 Sequoiadendron giganteum
SGA_v2.0_scaffold245G44749 Striga asiatica
SHI11506 Sapria himalayana
SHI26670 Sapria himalayana
SHI26671 Sapria himalayana
SHI26672 Sapria himalayana
SHI28703 Sapria himalayana
SHI28704 Sapria himalayana
SHI32491 Sapria himalayana
SHI36895 Sapria himalayana
SHI54253 Sapria himalayana
SHI54470 Sapria himalayana
SHI54813 Sapria himalayana
Solyc00g049210.1 Solanum lycopersicum
Solyc00g500249.1 Solanum lycopersicum
Solyc00g500348.1 Solanum lycopersicum
Solyc02g050290.1 Solanum lycopersicum
Solyc03g013380.1 Solanum lycopersicum
Solyc04g049870.1 Solanum lycopersicum
Solyc06g065880.1 Solanum lycopersicum
Solyc08g029270.2 Solanum lycopersicum
Solyc10g048130.3 Solanum lycopersicum
Solyc11g063620.2 Solanum lycopersicum
Solyc11g063630.1 Solanum lycopersicum
Solyc12g035895.1 Solanum lycopersicum
Solyc12g035910.1 Solanum lycopersicum
Sopen05g012690 Solanum pennellii
Sp3g25620 Schrenkiella parvula
Sp3g25860 Schrenkiella parvula
Thhalv10029166m.g Eutrema salsugineum
TPR.G13188 Trifolium pratense
TPR.G22134 Trifolium pratense
TPR.G885 Trifolium pratense
Zm00001eb434740 Zea mays
Zm00001eb436360 Zea mays
Zm00001eb437010 Zea mays
Zm00001eb438050 Zea mays
Zm00001eb438170 Zea mays
Zm00001eb438820 Zea mays

User provided reference genes

Program Settings