Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p05490 Brassica napus
Aa31LG1G26960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1643 Anthoceros agrestis
Actinidia12272 Actinidia chinensis
Actinidia31422 Actinidia chinensis
Actinidia33460 Actinidia chinensis
Ah.16g103740 Amaranthus hybridus
AL4G44630 Arabidopsis lyrata
Aqoxy2G02051 Aquilegia oxysepala
Aqoxy7G00586 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Y1PWL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2UV9R4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2V3ERI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5M5P73 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.63QVJR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.73J9IG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7YWS89 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8SNI53 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8X1DD2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9J1L2I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CI1NNE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DK59KL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EYC1DY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FJEF2G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GD98VG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H5PXMS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JKPH3R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K6PBMX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LXQN6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P6DNGG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RB3Z54 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XCJ58K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y88425 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YQ72RL Arachis hypogaea
AT2G45460 Arabidopsis thaliana
ATR0757G024 Amborella trichopoda
ATR0757G164 Amborella trichopoda
Atru.chr5.325 Acer truncatum
AUR62004229 Chenopodium quinoa
AUR62013619 Chenopodium quinoa
BcaB02g08998 Brassica carinata
BcaC02g12205 Brassica carinata
BolC4t22266H Brassica oleracea
BraA05t19519Z Brassica rapa
C04p06430 Brassica napus
CAN.G170.4 Capsicum annuum
CANSAT56G0321 Cannabis sativa
CARHR140650 Cardamine hirsuta
Carub.0004s2807 Capsella rubella
Ca_07831_v3 Cicer arietinum L.
CBR_g40168 Chara braunii
Cc02_g36540 Coffea canephora
CDE04G0282 Ceratophyllum demersum
Cfa001702 Carpinus fangiana
Cfa022202 Carpinus fangiana
Ciclev10018784m.g Citrus clementina
CiPaw.01G260600 Carya illinoinensis
ClCG05G002120 Citrullus lanatus
COL.COLO4_12572 Corchorus olitorius
Cpa.g.sc18.133 Carica papaya
Cpa.g.sc18.136 Carica papaya
CsaV3_3G009550 Cucumis sativus L.
CSS0022656 Camellia sinensis var. sinensis
CSS0038978 Camellia sinensis var. sinensis
DCAR_006876 Daucus carota
DCAR_006877 Daucus carota
Dinv00151 Davidia involucrata
Dinv00152 Davidia involucrata
Dinv00153 Davidia involucrata
Dinv32391 Davidia involucrata
Duzib138G1007 Durio zibethinus
ECA240G2591 Erigeron canadensis
EL10Ac1g00911 Beta vulgaris
Eucgr.E01409 Eucalyptus grandis
FAN03G0266 Fragaria x ananassa
FAN06G2206 Fragaria x ananassa
FAN06G4715 Fragaria x ananassa
FAN10G1409 Fragaria x ananassa
FAN10G1690 Fragaria x ananassa
FvH4_7g12090 Fragaria vesca
Glyma.09G268000 Glycine max
Glyma.18G221900 Glycine max
Gohir.A11G081700 Gossypium hirsutum
Gohir.A12G102200 Gossypium hirsutum
Gohir.D11G086300 Gossypium hirsutum
Gohir.D12G105400 Gossypium hirsutum
Gorai.007G092200 Gossypium raimondii
Gorai.008G114700 Gossypium raimondii
GSVIVG01027630001 Vitis vinifera
HanXRQChr03g0093811 Helianthus annuus
Haze_16831 Corylus avellana
Hma1.2p1_1793F.1_g302630 Hydrangea macrophylla
Hma1.2p1_1793F.1_g302640 Hydrangea macrophylla
Hma1.2p1_3528F.1_g336625 Hydrangea macrophylla
Hma1.2p1_3528F.1_g336630 Hydrangea macrophylla
HPP92_018393 Vanilla planifolia
HPP92_018394 Vanilla planifolia
Hund17008 Selenicereus undatus
Lalb_Chr07g0189651 Lupinus albus
Lalb_Chr12g0208391 Lupinus albus
Lalb_Chr12g0208441 Lupinus albus
Lj1g0027935 Lotus japonicus
Lj7C526G13 Lonicera japonica
Lj9C572T3 Lonicera japonica
Lsat_1_v5_gn_3_133301 Lactuca sativa
Manes.05G044000 Manihot esculenta
Mapoly0005s0201 Marchantia polymorpha
Mapoly0048s0074 Marchantia polymorpha
MBI11_g23939_MAGBIO Magnolia biondii
MD02G1201400 Malus domestica
Medtr7g075140 Medicago truncatula
MELO3C006177.2 Cucumis melo
Migut.B01647 Erythranthe guttata
MSTRG.20759 Avicennia marina
Nitab4.5_0004320g0020 Nicotiana tabacum
Nitab4.5_0010473g0020 Nicotiana tabacum
Nn4g26437 Nelumbo nucifera
Oeu005773.1 Olea europaea
Oeu005774.1 Olea europaea
Oeu037907.1 Olea europaea
Os03g0127600 Oryza sativa ssp. japonica
Peaxi162Scf00021g01316 Petunia axillaris
PGR042G2753 Punica granatum
PGSC0003DMG400012752 Solanum tuberosum
Phvul.008G075200 Phaseolus vulgaris
Potri.014G071400 Populus trichocarpa
Pp3c5_28010 Physcomitrium patens
Prupe.2G147400 Prunus persica
Psat3g115320 Pisum sativum
Psat6g122920 Pisum sativum
PSO478G3708 Papaver somniferum
PSO782G3046 Papaver somniferum
QL08p051978 Quercus lobata
RcHm_v2.0_Chr1g0350831 Rosa chinensis
Rhsim07G0025900 Rhododendron simsii
Rhsim07G0026000 Rhododendron simsii
Rhsim07G0026800 Rhododendron simsii
Sabra14G0050700 Salix brachista
SalBow3G1117 Salvia bowleyana
SalBow5G4135 Salvia bowleyana
Sc26g0001190 Simmondsia chinensis
Sed0014964 Sechium edule
SEGI_05063 Sequoiadendron giganteum
SEGI_21780 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28893 Striga asiatica
SHI13515 Sapria himalayana
SMO147G0240 Selaginella moellendorffii
Solyc01g091500.3 Solanum lycopersicum
Sopen01g037250 Solanum pennellii
Sp4g27490 Schrenkiella parvula
TAR629G2254 Trochodendron aralioides
TAR636G3381 Trochodendron aralioides
Thecc.01G374400 Theobroma cacao
Thhalv10001303m.g Eutrema salsugineum
TPR.G26922 Trifolium pratense
TWI14G1161 Tripterygium wilfordii
TWI56G0254 Tripterygium wilfordii
TWI56G0444 Tripterygium wilfordii
TWI56G0921 Tripterygium wilfordii
TWI56G1146 Tripterygium wilfordii
TWI56G1263 Tripterygium wilfordii
TWI56G1317 Tripterygium wilfordii
unitig_11.g32402 Utricularia gibba
unitig_31.g34036 Utricularia gibba
unitig_31.g34037 Utricularia gibba
unitig_31.g34038 Utricularia gibba
unitig_31.g34039 Utricularia gibba
unitig_8.g3816 Utricularia gibba
unitig_8.g3817 Utricularia gibba
unitig_8.g3821 Utricularia gibba
vmacro13387 Vaccinium macrocarpon
vmacro13388 Vaccinium macrocarpon
vmacro22718 Vaccinium macrocarpon
VMungo1383G1498 Vigna mungo
VMungo1383G3044 Vigna mungo
Zm00001eb002020 Zea mays
Zm00001eb403560 Zea mays

User provided reference genes

Program Settings