Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p01000 Brassica napus
A07p12660 Brassica napus
A08p27040 Brassica napus
A09p39520 Brassica napus
Aa31LG7G8980 Aethionema arabicum
Actinidia04613 Actinidia chinensis
Actinidia04624 Actinidia chinensis
Actinidia13670 Actinidia chinensis
Actinidia14863 Actinidia chinensis
Actinidia15870 Actinidia chinensis
Actinidia16627 Actinidia chinensis
Actinidia38385 Actinidia chinensis
AL1G39780 Arabidopsis lyrata
AL2G27570 Arabidopsis lyrata
Aqoxy3G00348 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LE8ECZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UC30TE Arachis hypogaea
AT1G25520 Arabidopsis thaliana
AT1G68650 Arabidopsis thaliana
ATR0564G438 Amborella trichopoda
Atru.chr11.1332 Acer truncatum
AUR62002908 Chenopodium quinoa
AUR62035267 Chenopodium quinoa
BcaB03g12088 Brassica carinata
BcaB03g14050 Brassica carinata
BcaC01g01714 Brassica carinata
BcaC05g26445 Brassica carinata
BcaC06g35192 Brassica carinata
BolC3t19584H Brassica oleracea
BolC5t31223H Brassica oleracea
BolC7t42391H Brassica oleracea
BraA04t15817Z Brassica rapa
BraA07t29044Z Brassica rapa
BraA08t34649Z Brassica rapa
BraA09t39451Z Brassica rapa
C03p72860 Brassica napus
C05p24940 Brassica napus
CAN.G674.39 Capsicum annuum
CANSAT64G1498 Cannabis sativa
CARHR025940 Cardamine hirsuta
CARHR061460 Cardamine hirsuta
Carub.0001s2496 Capsella rubella
Carub.0002s1519 Capsella rubella
Ca_11192_v3 Cicer arietinum L.
CBR_g49428 Chara braunii
Cc07_g08950 Coffea canephora
Cc11_g10470 Coffea canephora
CDE05G3401 Ceratophyllum demersum
Ciclev10032658m.g Citrus clementina
CiPaw.15G004500 Carya illinoinensis
CiPaw.15G119900 Carya illinoinensis
CiPaw.16G004000 Carya illinoinensis
ClCG08G005110 Citrullus lanatus
COL.COLO4_07883 Corchorus olitorius
Cpa.g.sc1.207 Carica papaya
Cre17.g731300 Chlamydomonas reinhardtii
CsaV3_6G003330 Cucumis sativus L.
CSS0002959 Camellia sinensis var. sinensis
CSS0008712 Camellia sinensis var. sinensis
CSS0010006 Camellia sinensis var. sinensis
CSS0032911 Camellia sinensis var. sinensis
CSS0043394 Camellia sinensis var. sinensis
CSS0043709 Camellia sinensis var. sinensis
DCAR_030076 Daucus carota
Dinv04488 Davidia involucrata
Dinv21119 Davidia involucrata
Duzib248G0223 Durio zibethinus
Duzib251G0949 Durio zibethinus
ECA233G1121 Erigeron canadensis
ECA234G3415 Erigeron canadensis
EL10Ac6g14462 Beta vulgaris
Eucgr.B03039 Eucalyptus grandis
Eucgr.G02342 Eucalyptus grandis
Eucgr.J01473 Eucalyptus grandis
Eucgr.J01475 Eucalyptus grandis
FAN07G0105 Fragaria x ananassa
FAN12G0469 Fragaria x ananassa
FAN17G3041 Fragaria x ananassa
FAN22G0038 Fragaria x ananassa
FvH4_4g27780 Fragaria vesca
Glyma.10G276300 Glycine max
Glyma.20G113400 Glycine max
Gohir.A13G053498 Gossypium hirsutum
Gohir.A13G053512 Gossypium hirsutum
Gohir.D13G070500 Gossypium hirsutum
Gohir.D13G070600 Gossypium hirsutum
Gorai.013G080700 Gossypium raimondii
Gorai.013G080800 Gossypium raimondii
GSVIVG01011934001 Vitis vinifera
HanXRQChr08g0214301 Helianthus annuus
HanXRQChr16g0529591 Helianthus annuus
Haze_17451 Corylus avellana
Hma1.2p1_0030F.1_g018340 Hydrangea macrophylla
Hund25091 Selenicereus undatus
Lalb_Chr02g0146111 Lupinus albus
Lalb_Chr06g0166181 Lupinus albus
Lj3A1018T63 Lonicera japonica
Lj5g0018528 Lotus japonicus
Lj6C762T7 Lonicera japonica
Lj6C764T4 Lonicera japonica
Lsat_1_v5_gn_4_18960 Lactuca sativa
Lsat_1_v5_gn_8_38801 Lactuca sativa
Manes.01G108600 Manihot esculenta
Manes.14G098900 Manihot esculenta
Mapoly0093s0014 Marchantia polymorpha
MBI12_g36306_MAGBIO Magnolia biondii
MCO05G681 Micromonas commoda
MD13G1045000 Malus domestica
MD16G1046300 Malus domestica
Medtr1g111390 Medicago truncatula
MELO3C011548.2 Cucumis melo
Migut.E00316 Erythranthe guttata
Migut.L01090 Erythranthe guttata
Migut.L01391 Erythranthe guttata
MSTRG.13509 Avicennia marina
MSTRG.2253 Avicennia marina
Nitab4.5_0000672g0130 Nicotiana tabacum
Nitab4.5_0006883g0020 Nicotiana tabacum
Nn4g23760 Nelumbo nucifera
Oeu010775.1 Olea europaea
Oeu041891.1 Olea europaea
Os08g0433100 Oryza sativa ssp. japonica
Peaxi162Scf00380g00710 Petunia axillaris
PGR102G1529 Punica granatum
PGSC0003DMG400000829 Solanum tuberosum
Phvul.007G025300 Phaseolus vulgaris
Potri.008G117900 Populus trichocarpa
Potri.010G128400 Populus trichocarpa
Potri.019G116100 Populus trichocarpa
Pp3c7_800 Physcomitrium patens
PRCOL_00003173 Prasinoderma coloniale
Prupe.1G306900 Prunus persica
Psat6g229680 Pisum sativum
PSO017G7358 Papaver somniferum
PSO478G3555 Papaver somniferum
QL01p044656 Quercus lobata
QL01p044663 Quercus lobata
RcHm_v2.0_Chr4g0435641 Rosa chinensis
Rhsim09G0111000 Rhododendron simsii
Rhsim09G0111100 Rhododendron simsii
Sabra08G0089400 Salix brachista
Sabra10G0097600 Salix brachista
SalBow8G1991 Salvia bowleyana
SalBow8G2013 Salvia bowleyana
SalBow8G2850 Salvia bowleyana
SalBow8G2938 Salvia bowleyana
Sc11g0003180 Simmondsia chinensis
Sed0015668 Sechium edule
Sed0017076 Sechium edule
SEGI_01168 Sequoiadendron giganteum
SEGI_20026 Sequoiadendron giganteum
SEGI_35455 Sequoiadendron giganteum
SGA_v2.0_scaffold124G33582 Striga asiatica
SGA_v2.0_scaffold170G38747 Striga asiatica
SMO119G0381 Selaginella moellendorffii
Solyc05g009690.3 Solanum lycopersicum
Sopen05g005510 Solanum pennellii
Sp1g22690 Schrenkiella parvula
Sp5g23750 Schrenkiella parvula
TAR371G0277 Trochodendron aralioides
TAR371G0896 Trochodendron aralioides
TAR622G0461 Trochodendron aralioides
THA.LOC104804869 Tarenaya hassleriana
THA.LOC104821955 Tarenaya hassleriana
Thecc.02G359300 Theobroma cacao
Thhalv10008674m.g Eutrema salsugineum
Thhalv10019088m.g Eutrema salsugineum
TPR.G26291 Trifolium pratense
TWI31G0096 Tripterygium wilfordii
TWI75G0072 Tripterygium wilfordii
TWI79G1043 Tripterygium wilfordii
unitig_62.g23718 Utricularia gibba
vmacro10539 Vaccinium macrocarpon
vmacro10540 Vaccinium macrocarpon
VMungo0720G2569 Vigna mungo
Zm00001eb041600 Zea mays
Zm00001eb179600 Zea mays

User provided reference genes

Program Settings