Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p31670 Brassica napus
A06p11120 Brassica napus
A08p31730 Brassica napus
A09p61560 Brassica napus
Aa31LG2G8780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2620 Anthoceros agrestis
Actinidia00232 Actinidia chinensis
Actinidia38960 Actinidia chinensis
AL1G27180 Arabidopsis lyrata
Aqoxy2G00844 Aquilegia oxysepala
Aqoxy5G02118 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D7TB4J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EN81KK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYBE61 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4HF2T Arachis hypogaea
AT1G15120 Arabidopsis thaliana
AT2G01090 Arabidopsis thaliana
ATR0772G203 Amborella trichopoda
Atru.chr13.2169 Acer truncatum
Atru.chr6.939 Acer truncatum
Atru.chr6.943 Acer truncatum
AUR62035137 Chenopodium quinoa
AUR62042907 Chenopodium quinoa
BcaB02g06577 Brassica carinata
BcaB03g13075 Brassica carinata
BcaB03g14560 Brassica carinata
BcaC05g25441 Brassica carinata
BcaC07g38769 Brassica carinata
BolC2t10995H Brassica oleracea
BolC5t30061H Brassica oleracea
BolC8t49327H Brassica oleracea
BolC8t52063H Brassica oleracea
BraA02t08170Z Brassica rapa
BraA06t24292Z Brassica rapa
BraA08t35095Z Brassica rapa
BraA09t41529Z Brassica rapa
C02p49010 Brassica napus
C02p49050 Brassica napus
C05p13240 Brassica napus
C08p17020 Brassica napus
C08p45150 Brassica napus
CAN.G339.37 Capsicum annuum
CANSAT11G1560 Cannabis sativa
CARHR015640 Cardamine hirsuta
CARHR143640 Cardamine hirsuta
Carub.0001s1488 Capsella rubella
CBR_g10999 Chara braunii
CDE04G0116 Ceratophyllum demersum
CDE04G2322 Ceratophyllum demersum
Cfa005572 Carpinus fangiana
Ciclev10002923m.g Citrus clementina
CiPaw.05G040300 Carya illinoinensis
CiPaw.06G150500 Carya illinoinensis
ClCG05G009840 Citrullus lanatus
COL.COLO4_17923 Corchorus olitorius
Cpa.g.sc2.46 Carica papaya
CsaV3_3G018780 Cucumis sativus L.
CSS0003096 Camellia sinensis var. sinensis
CSS0009103 Camellia sinensis var. sinensis
Dinv01060 Davidia involucrata
Dinv05188 Davidia involucrata
Dinv19332 Davidia involucrata
Dinv24242 Davidia involucrata
Duzib052G0314 Durio zibethinus
Duzib116G0919 Durio zibethinus
Duzib132G0061 Durio zibethinus
Duzib132G0328 Durio zibethinus
Duzib248G1617 Durio zibethinus
ECA236G2466 Erigeron canadensis
EL10Ac1g01528 Beta vulgaris
Eucgr.I02701 Eucalyptus grandis
FAN03G2302 Fragaria x ananassa
FAN04G1676 Fragaria x ananassa
FAN06G4594 Fragaria x ananassa
FAN07G2777 Fragaria x ananassa
FAN08G0225 Fragaria x ananassa
FAN12G2386 Fragaria x ananassa
FAN13G2961 Fragaria x ananassa
FAN17G0735 Fragaria x ananassa
FAN18G4256 Fragaria x ananassa
FAN22G1408 Fragaria x ananassa
FvH4_5g30500 Fragaria vesca
FvH4_7g02900 Fragaria vesca
Glyma.08G181800 Glycine max
Glyma.15G050500 Glycine max
Gohir.A01G001400 Gossypium hirsutum
Gohir.A02G111100 Gossypium hirsutum
Gohir.A12G033300 Gossypium hirsutum
Gohir.D01G001100 Gossypium hirsutum
Gohir.D03G062900 Gossypium hirsutum
Gohir.D12G039500 Gossypium hirsutum
Gorai.002G001600 Gossypium raimondii
Gorai.008G041200 Gossypium raimondii
Gorai.013G108600 Gossypium raimondii
GSVIVG01034509001 Vitis vinifera
HanXRQChr11g0337581 Helianthus annuus
HanXRQChr11g0337591 Helianthus annuus
Haze_10788 Corylus avellana
Hma1.2p1_1800F.1_g302950 Hydrangea macrophylla
Lj6g0000311 Lotus japonicus
Lsat_1_v5_gn_7_79760 Lactuca sativa
Lsat_1_v5_gn_9_116680 Lactuca sativa
Manes.02G178600 Manihot esculenta
Manes.18G073709 Manihot esculenta
Manes.18G090900 Manihot esculenta
Manes.18G091100 Manihot esculenta
Mapoly0020s0072 Marchantia polymorpha
MBI13_g20498_MAGBIO Magnolia biondii
MBI13_g29655_MAGBIO Magnolia biondii
MCO16G078 Micromonas commoda
MD05G1023300 Malus domestica
MD08G1223400 Malus domestica
Medtr2g008070 Medicago truncatula
MELO3C019495.2 Cucumis melo
Migut.B00649 Erythranthe guttata
Migut.N01017 Erythranthe guttata
Nitab4.5_0000078g0350 Nicotiana tabacum
Nitab4.5_0004027g0040 Nicotiana tabacum
Nitab4.5_0005474g0030 Nicotiana tabacum
Nitab4.5_0013344g0010 Nicotiana tabacum
Nn1g06112 Nelumbo nucifera
Nn5g28709 Nelumbo nucifera
Oeu012724.1 Olea europaea
Os02g0541700 Oryza sativa ssp. japonica
Os11g0162200 Oryza sativa ssp. japonica
Peaxi162Scf00067g02527 Petunia axillaris
Peaxi162Scf00152g01234 Petunia axillaris
PGR142G1796 Punica granatum
PGSC0003DMG400011391 Solanum tuberosum
PGSC0003DMG400011392 Solanum tuberosum
Phvul.006G209400 Phaseolus vulgaris
Potri.002G069200 Populus trichocarpa
Potri.002G069301 Populus trichocarpa
Potri.005G190901 Populus trichocarpa
Pp3c19_20470 Physcomitrium patens
Pp3c26_10210 Physcomitrium patens
Pp3c26_10390 Physcomitrium patens
PRCOL_00005271 Prasinoderma coloniale
Prupe.1G560700 Prunus persica
Prupe.8G028000 Prunus persica
Psat1g218920 Pisum sativum
PSO210G7830 Papaver somniferum
PSO238G0030 Papaver somniferum
QL11p018723 Quercus lobata
RcHm_v2.0_Chr7g0225181 Rosa chinensis
Sabra05G0145900 Salix brachista
SalBow6G5306 Salvia bowleyana
Sc02g0004100 Simmondsia chinensis
Sc26g0002640 Simmondsia chinensis
Sed0011383 Sechium edule
Sed0019459 Sechium edule
SMO117G0126 Selaginella moellendorffii
Solyc09g074870.4 Solanum lycopersicum
Solyc09g150155.1 Solanum lycopersicum
Sopen09g029690 Solanum pennellii
Sp1g13460 Schrenkiella parvula
TAR381G0439 Trochodendron aralioides
TAR625G1245 Trochodendron aralioides
TAR628G1659 Trochodendron aralioides
THA.LOC109116537 Tarenaya hassleriana
THA.LOC109117087 Tarenaya hassleriana
Thecc.02G044000 Theobroma cacao
Thecc.08G150500 Theobroma cacao
Thhalv10001040m.g Eutrema salsugineum
Thhalv10009667m.g Eutrema salsugineum
Thhalv10028069m.g Eutrema salsugineum
Thhalv10029056m.g Eutrema salsugineum
TPR.G19749 Trifolium pratense
TWI14G0008 Tripterygium wilfordii
TWI23G0468 Tripterygium wilfordii
TWI34G0745 Tripterygium wilfordii
unitig_578.g15948 Utricularia gibba
unitig_8.g2965 Utricularia gibba
vmacro22914 Vaccinium macrocarpon
Zm00001eb139450 Zea mays
Zm00001eb181710 Zea mays
Zm00001eb202390 Zea mays
Zm00001eb243140 Zea mays

User provided reference genes

Program Settings