Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p31160 Brassica napus
A09p68580 Brassica napus
A10p01380 Brassica napus
Aa31LG5G1840 Aethionema arabicum
Actinidia21012 Actinidia chinensis
Actinidia21418 Actinidia chinensis
Ah.11g049420 Amaranthus hybridus
AL1G12020 Arabidopsis lyrata
AL6G50980 Arabidopsis lyrata
Aqoxy2G02808 Aquilegia oxysepala
AT4G02170 Arabidopsis thaliana
AT5G38700 Arabidopsis thaliana
ATR0580G176 Amborella trichopoda
ATR0706G232 Amborella trichopoda
Atru.chr5.1052 Acer truncatum
AUR62011841 Chenopodium quinoa
AUR62024684 Chenopodium quinoa
BcaB01g02435 Brassica carinata
BcaB03g15798 Brassica carinata
BcaC01g06770 Brassica carinata
BcaC01g06771 Brassica carinata
BcaC07g42307 Brassica carinata
BcaC07g42401 Brassica carinata
BolC3t16086H Brassica oleracea
BolC5t28918H Brassica oleracea
BolC8t52834H Brassica oleracea
BraA03t12296Z Brassica rapa
BraA09t42201Z Brassica rapa
BraA10t42414Z Brassica rapa
C03p38000 Brassica napus
C05p01360 Brassica napus
C08p53190 Brassica napus
CAN.G69.5 Capsicum annuum
CAN.G69.6 Capsicum annuum
CANSAT25G2552 Cannabis sativa
CARHR001970 Cardamine hirsuta
CARHR250350 Cardamine hirsuta
Carub.0001s0174 Capsella rubella
Carub.0006s3500 Capsella rubella
Ca_10301_v3 Cicer arietinum L.
Cc08_g11830 Coffea canephora
Cfa005842 Carpinus fangiana
Ciclev10022416m.g Citrus clementina
CiPaw.07G114900 Carya illinoinensis
CiPaw.08G091700 Carya illinoinensis
ClCG09G005270 Citrullus lanatus
COL.COLO4_09960 Corchorus olitorius
COL.COLO4_23265 Corchorus olitorius
Cpa.g.sc18.4 Carica papaya
CsaV3_7G029800 Cucumis sativus L.
DCAR_018309 Daucus carota
Dinv10067 Davidia involucrata
Dinv33098 Davidia involucrata
Duzib133G0291 Durio zibethinus
Duzib138G1652 Durio zibethinus
Duzib147G1191 Durio zibethinus
Duzib264G0610 Durio zibethinus
ECA248G3170 Erigeron canadensis
EL10As5g23497 Beta vulgaris
Eucgr.A02768 Eucalyptus grandis
Eucgr.E02370 Eucalyptus grandis
Eucgr.E02488 Eucalyptus grandis
Eucgr.F04057 Eucalyptus grandis
Eucgr.F04083 Eucalyptus grandis
Eucgr.H01059 Eucalyptus grandis
Eucgr.H01062 Eucalyptus grandis
Eucgr.H01065 Eucalyptus grandis
Eucgr.H01068 Eucalyptus grandis
Eucgr.H01752 Eucalyptus grandis
Eucgr.K03524 Eucalyptus grandis
Eucgr.K03525 Eucalyptus grandis
Eucgr.L00541 Eucalyptus grandis
Eucgr.L01709 Eucalyptus grandis
Eucgr.L01710 Eucalyptus grandis
Eucgr.L01711 Eucalyptus grandis
Eucgr.L02503 Eucalyptus grandis
Eucgr.L02691 Eucalyptus grandis
FAN04G0217 Fragaria x ananassa
FAN08G1995 Fragaria x ananassa
FAN13G3073 Fragaria x ananassa
FAN18G0157 Fragaria x ananassa
FvH4_5g39610 Fragaria vesca
Glyma.02G014300 Glycine max
Glyma.10G015000 Glycine max
Gohir.A07G127400 Gossypium hirsutum
Gohir.A11G111300 Gossypium hirsutum
Gohir.A12G126700 Gossypium hirsutum
Gohir.D07G131700 Gossypium hirsutum
Gohir.D11G116500 Gossypium hirsutum
Gohir.D12G130100 Gossypium hirsutum
Gorai.001G143000 Gossypium raimondii
Gorai.007G124700 Gossypium raimondii
Gorai.008G141400 Gossypium raimondii
HanXRQChr01g0000871 Helianthus annuus
HanXRQChr05g0137341 Helianthus annuus
HanXRQChr05g0137351 Helianthus annuus
Haze_05008 Corylus avellana
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla
HPP92_006897 Vanilla planifolia
HPP92_011875 Vanilla planifolia
HPP92_025188 Vanilla planifolia
HPP92_025189 Vanilla planifolia
Lalb_Chr02g0146651 Lupinus albus
Lalb_Chr06g0166611 Lupinus albus
Lj1C20T16 Lonicera japonica
Lj1C20T6 Lonicera japonica
Lj2P1202T13 Lonicera japonica
Lsat_1_v5_gn_9_541 Lactuca sativa
Manes.01G225600 Manihot esculenta
MD03G1297400 Malus domestica
MD11G1317200 Malus domestica
Medtr1g087710 Medicago truncatula
MELO3C015941.2 Cucumis melo
Migut.D00101 Erythranthe guttata
Nitab4.5_0000116g0070 Nicotiana tabacum
Nitab4.5_0000116g0080 Nicotiana tabacum
Nitab4.5_0010548g0010 Nicotiana tabacum
Nitab4.5_0017359g0010 Nicotiana tabacum
Nitab4.5_0025993g0010 Nicotiana tabacum
Nn2g11432 Nelumbo nucifera
Nn2g14986 Nelumbo nucifera
Nn3g21628 Nelumbo nucifera
Nn6g33912 Nelumbo nucifera
Oeu005872.1 Olea europaea
Oeu005873.1 Olea europaea
Oeu008329.1 Olea europaea
Oeu008453.1 Olea europaea
Os01g0861400 Oryza sativa ssp. japonica
Os03g0302800 Oryza sativa ssp. japonica
Peaxi162Scf00001g00254 Petunia axillaris
Peaxi162Scf00001g00262 Petunia axillaris
Peaxi162Scf00001g00263 Petunia axillaris
PGR119G1194 Punica granatum
PGR119G2399 Punica granatum
PGR119G2441 Punica granatum
PGSC0003DMG400009002 Solanum tuberosum
PGSC0003DMG400037362 Solanum tuberosum
Phvul.007G216200 Phaseolus vulgaris
Potri.002G198800 Populus trichocarpa
Potri.014G123400 Populus trichocarpa
Prupe.8G269600 Prunus persica
PSO210G7449 Papaver somniferum
PSO761G0583 Papaver somniferum
QL12p028945 Quercus lobata
RcHm_v2.0_Chr7g0241911 Rosa chinensis
Rhsim01G0289200 Rhododendron simsii
Rhsim13G0006400 Rhododendron simsii
Sabra02G0159000 Salix brachista
Sabra14G0091700 Salix brachista
SalBow2G3380 Salvia bowleyana
Sc17g0000570 Simmondsia chinensis
Sc17g0000580 Simmondsia chinensis
Sed0014571 Sechium edule
Sed0026960 Sechium edule
SGA_v2.0_scaffold198G41126 Striga asiatica
SGA_v2.0_scaffold334G49053 Striga asiatica
Solyc01g079660.2 Solanum lycopersicum
Solyc01g079670.2 Solanum lycopersicum
Sopen01g031440 Solanum pennellii
Sopen01g031450 Solanum pennellii
Sp1g01670 Schrenkiella parvula
Sp6g02070 Schrenkiella parvula
TAR362G0521 Trochodendron aralioides
TAR633G0094 Trochodendron aralioides
TAR633G1354 Trochodendron aralioides
THA.LOC104801296 Tarenaya hassleriana
Thecc.01G102100 Theobroma cacao
Thecc.01G310000 Theobroma cacao
Thhalv10009571m.g Eutrema salsugineum
Thhalv10029363m.g Eutrema salsugineum
Thhalv10029373m.g Eutrema salsugineum
TPR.G7317 Trifolium pratense
TWI36G1341 Tripterygium wilfordii
TWI75G0985 Tripterygium wilfordii
vmacro02415 Vaccinium macrocarpon
VMungo0720G2360 Vigna mungo
Zm00001eb014210 Zea mays
Zm00001eb303020 Zea mays
Zm00001eb396420 Zea mays

User provided reference genes

Program Settings