Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p42860 Brassica napus
Aa31LG4G7350 Aethionema arabicum
Actinidia03424 Actinidia chinensis
Actinidia29491 Actinidia chinensis
Ah.05g169150 Amaranthus hybridus
AL2G37520 Arabidopsis lyrata
Aqoxy6G00310 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.69Q1HU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TXAW3L Arachis hypogaea
AT1G77320 Arabidopsis thaliana
ATR0561G100 Amborella trichopoda
ATR0561G228 Amborella trichopoda
Atru.chr13.1560 Acer truncatum
AUR62007718 Chenopodium quinoa
AUR62013424 Chenopodium quinoa
BcaB04g19399 Brassica carinata
BcaC08g47618 Brassica carinata
BolC2t09478H Brassica oleracea
BolC6t40166H Brassica oleracea
BraA07t31807Z Brassica rapa
C02p34480 Brassica napus
C06p51480 Brassica napus
CAN.G410.39 Capsicum annuum
CAN.G410.40 Capsicum annuum
CANSAT25G1503 Cannabis sativa
CANSAT80G2764 Cannabis sativa
CARHR070810 Cardamine hirsuta
Carub.0002s2420 Capsella rubella
CBR_g335 Chara braunii
CBR_g37446 Chara braunii
Cc02_g29380 Coffea canephora
CDE02G2376 Ceratophyllum demersum
Cfa018127 Carpinus fangiana
Cfa023667 Carpinus fangiana
Ciclev10000159m.g Citrus clementina
Ciclev10003608m.g Citrus clementina
CiPaw.16G022900 Carya illinoinensis
ClCG11G015970 Citrullus lanatus
COL.COLO4_08845 Corchorus olitorius
Cpa.g.sc64.150 Carica papaya
Cre12.g515900 Chlamydomonas reinhardtii
CsaV3_1G017340 Cucumis sativus L.
CsaV3_2G000040 Cucumis sativus L.
CsaV3_2G000050 Cucumis sativus L.
CsaV3_3G026500 Cucumis sativus L.
CsaV3_3G026510 Cucumis sativus L.
CsaV3_4G028020 Cucumis sativus L.
CsaV3_4G028030 Cucumis sativus L.
CsaV3_4G038030 Cucumis sativus L.
CsaV3_5G018940 Cucumis sativus L.
CsaV3_5G018960 Cucumis sativus L.
CsaV3_5G018970 Cucumis sativus L.
CsaV3_5G019970 Cucumis sativus L.
CsaV3_UNG034160 Cucumis sativus L.
CsaV3_UNG040210 Cucumis sativus L.
CsaV3_UNG070580 Cucumis sativus L.
CsaV3_UNG082660 Cucumis sativus L.
CsaV3_UNG082670 Cucumis sativus L.
CsaV3_UNG098730 Cucumis sativus L.
CsaV3_UNG098740 Cucumis sativus L.
CsaV3_UNG111830 Cucumis sativus L.
CsaV3_UNG111840 Cucumis sativus L.
CsaV3_UNG111860 Cucumis sativus L.
CsaV3_UNG113870 Cucumis sativus L.
CsaV3_UNG113880 Cucumis sativus L.
CsaV3_UNG115900 Cucumis sativus L.
CsaV3_UNG123970 Cucumis sativus L.
CsaV3_UNG142080 Cucumis sativus L.
CsaV3_UNG169310 Cucumis sativus L.
CsaV3_UNG169320 Cucumis sativus L.
CsaV3_UNG178370 Cucumis sativus L.
CsaV3_UNG224630 Cucumis sativus L.
CsaV3_UNG224640 Cucumis sativus L.
CsaV3_UNG224660 Cucumis sativus L.
CsaV3_UNG224670 Cucumis sativus L.
CsaV3_UNG224680 Cucumis sativus L.
CSS0013013 Camellia sinensis var. sinensis
CSS0038833 Camellia sinensis var. sinensis
Dinv04787 Davidia involucrata
Dinv14683 Davidia involucrata
Dinv14684 Davidia involucrata
Dinv14685 Davidia involucrata
Duzib093G0162 Durio zibethinus
Duzib116G0160 Durio zibethinus
ECA233G0473 Erigeron canadensis
EL10Ac1g01344 Beta vulgaris
Eucgr.B02057 Eucalyptus grandis
Eucgr.B02095 Eucalyptus grandis
Eucgr.F03841 Eucalyptus grandis
Eucgr.F03843 Eucalyptus grandis
FAN20G0097 Fragaria x ananassa
FvH4_2g27821 Fragaria vesca
Glyma.16G005600 Glycine max
Gohir.A02G110400 Gossypium hirsutum
Gohir.D03G069003 Gossypium hirsutum
Gorai.013G107700 Gossypium raimondii
GSVIVG01008809001 Vitis vinifera
HanXRQChr02g0040561 Helianthus annuus
Hma1.2p1_0014F.1_g010190 Hydrangea macrophylla
Hma1.2p1_0014F.1_g010210 Hydrangea macrophylla
Hma1.2p1_1887F.1_g306530 Hydrangea macrophylla
HPP92_002159 Vanilla planifolia
HPP92_002227 Vanilla planifolia
HPP92_027721 Vanilla planifolia
Hund26774 Selenicereus undatus
Lalb_Chr17g0343591 Lupinus albus
Lj1g0014366 Lotus japonicus
Lj4C682G10 Lonicera japonica
Lsat_1_v5_gn_1_6740 Lactuca sativa
Lsat_1_v5_gn_1_9620 Lactuca sativa
Manes.02G168200 Manihot esculenta
Mapoly0158s0032 Marchantia polymorpha
MBI06_g35213_MAGBIO Magnolia biondii
MCO14G357 Micromonas commoda
MD08G1159000 Malus domestica
MD08G1159100 Malus domestica
Medtr1g029630 Medicago truncatula
Medtr7g090980 Medicago truncatula
Medtr7g091010 Medicago truncatula
MELO3C010511.2 Cucumis melo
Migut.N01819 Erythranthe guttata
Nitab4.5_0000316g0190 Nicotiana tabacum
Nitab4.5_0001543g0060 Nicotiana tabacum
Nn1g08963 Nelumbo nucifera
Oeu009633.1 Olea europaea
Os11g0191300 Oryza sativa ssp. japonica
Peaxi162Scf00087g00021 Petunia axillaris
PGR042G0290 Punica granatum
Phvul.001G070600 Phaseolus vulgaris
Phvul.002G078200 Phaseolus vulgaris
Potri.005G182500 Populus trichocarpa
Pp3c19_810 Physcomitrium patens
Pp3c3_700 Physcomitrium patens
PRCOL_00000968 Prasinoderma coloniale
Prupe.1G489800 Prunus persica
Psat0s9845g0040 Pisum sativum
Psat3g039720 Pisum sativum
Psat6g040520 Pisum sativum
PSO170G6194 Papaver somniferum
PSO528G0248 Papaver somniferum
QL02p080926 Quercus lobata
QL05p047797 Quercus lobata
QL05p086782 Quercus lobata
QL09p032547 Quercus lobata
QL10p017539 Quercus lobata
QL10p027719 Quercus lobata
QL93p0100_0532 Quercus lobata
RcHm_v2.0_Chr6g0296681 Rosa chinensis
RcHm_v2.0_Chr6g0296691 Rosa chinensis
RcHm_v2.0_Chr7g0211681 Rosa chinensis
Rhsim08G0204800 Rhododendron simsii
Rhsim11G0071500 Rhododendron simsii
Sabra05G0138300 Salix brachista
SalBow6G4599 Salvia bowleyana
Sc26g0002950 Simmondsia chinensis
Sc26g0002960 Simmondsia chinensis
Sed0010713 Sechium edule
SEGI_12378 Sequoiadendron giganteum
SEGI_34477 Sequoiadendron giganteum
SEGI_38871 Sequoiadendron giganteum
SGA_v2.0_scaffold354G49742 Striga asiatica
SHI09206 Sapria himalayana
SHI09213 Sapria himalayana
SMO269G0035 Selaginella moellendorffii
Solyc01g068260.4 Solanum lycopersicum
Sopen01g030190 Solanum pennellii
Sopen01g030200 Solanum pennellii
Sp5g32500 Schrenkiella parvula
TAR229G0002 Trochodendron aralioides
THA.LOC104800232 Tarenaya hassleriana
THA.LOC104810225 Tarenaya hassleriana
Thecc.08G132800 Theobroma cacao
Thhalv10018076m.g Eutrema salsugineum
TPR.G30550 Trifolium pratense
TWI34G1866 Tripterygium wilfordii
unitig_21.g20280 Utricularia gibba
vmacro10605 Vaccinium macrocarpon
VMungo0647G1057 Vigna mungo
Zm00001eb091010 Zea mays

User provided reference genes

Program Settings