Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17890 Brassica napus
A04p24460 Brassica napus
A07p24850 Brassica napus
A09p52110 Brassica napus
Aa31LG1G19770 Aethionema arabicum
Aa31LG1G25550 Aethionema arabicum
Aa31LG5G5220 Aethionema arabicum
Actinidia18405 Actinidia chinensis
Ah.07g203070 Amaranthus hybridus
Ah.07g203080 Amaranthus hybridus
Ah.13g073270 Amaranthus hybridus
AL4G27060 Arabidopsis lyrata
AL4G42720 Arabidopsis lyrata
AL5G41930 Arabidopsis lyrata
Aqoxy2G04171 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F668M6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X978JA Arachis hypogaea
AT2G31800 Arabidopsis thaliana
AT2G43850 Arabidopsis thaliana
AT3G59830 Arabidopsis thaliana
ATR0743G099 Amborella trichopoda
Atru.chr3.1901 Acer truncatum
AUR62002446 Chenopodium quinoa
AUR62023743 Chenopodium quinoa
BcaB01g04021 Brassica carinata
BcaB01g04022 Brassica carinata
BcaB02g07442 Brassica carinata
BcaB06g28565 Brassica carinata
BcaB06g29346 Brassica carinata
BcaC01g05931 Brassica carinata
BcaC02g07969 Brassica carinata
BcaC08g45012 Brassica carinata
BcaNung04447 Brassica carinata
BolC3t14477H Brassica oleracea
BolC4t27618H Brassica oleracea
BolC6t37807H Brassica oleracea
BolC8t51081H Brassica oleracea
BraA03t11054Z Brassica rapa
BraA04t17963Z Brassica rapa
BraA07t30129Z Brassica rapa
BraA09t40643Z Brassica rapa
C03p20970 Brassica napus
C04p61300 Brassica napus
C06p26440 Brassica napus
C08p34790 Brassica napus
CAN.G176.4 Capsicum annuum
CANSAT56G2824 Cannabis sativa
CARHR125490 Cardamine hirsuta
CARHR139030 Cardamine hirsuta
CARHR170170 Cardamine hirsuta
Carub.0004s1310 Capsella rubella
Carub.0004s2639 Capsella rubella
Carub.0005s2655 Capsella rubella
Ca_17839_v3 Cicer arietinum L.
Cc03_g15220 Coffea canephora
CDE09G0310 Ceratophyllum demersum
Ciclev10019887m.g Citrus clementina
CiPaw.01G199700 Carya illinoinensis
CiPaw.02G123700 Carya illinoinensis
ClCG09G013700 Citrullus lanatus
COL.COLO4_37059 Corchorus olitorius
Cpa.g.sc250.15 Carica papaya
CsaV3_7G006000 Cucumis sativus L.
CSS0007304 Camellia sinensis var. sinensis
CSS0009822 Camellia sinensis var. sinensis
CSS0010123 Camellia sinensis var. sinensis
CSS0013661 Camellia sinensis var. sinensis
DCAR_023782 Daucus carota
Dinv24773 Davidia involucrata
Dinv33231 Davidia involucrata
Duzib151G0356 Durio zibethinus
Duzib212G0667 Durio zibethinus
ECA248G3926 Erigeron canadensis
EL10Ac3g06137 Beta vulgaris
Eucgr.H01867 Eucalyptus grandis
FAN23G2686 Fragaria x ananassa
FAN26G0435 Fragaria x ananassa
FAN28G2159 Fragaria x ananassa
FvH4_1g00360 Fragaria vesca
Glyma.05G167600 Glycine max
Glyma.08G126000 Glycine max
Gohir.A02G007000 Gossypium hirsutum
Gohir.A09G213624 Gossypium hirsutum
Gohir.A10G146900 Gossypium hirsutum
Gohir.D02G006600 Gossypium hirsutum
Gohir.D09G213000 Gossypium hirsutum
Gohir.D10G119200 Gossypium hirsutum
Gorai.005G007700 Gossypium raimondii
Gorai.006G233100 Gossypium raimondii
Gorai.011G131000 Gossypium raimondii
GSVIVG01038213001 Vitis vinifera
HanXRQChr01g0023341 Helianthus annuus
HanXRQChr11g0342961 Helianthus annuus
Haze_11159 Corylus avellana
HPP92_007030 Vanilla planifolia
HPP92_007031 Vanilla planifolia
HPP92_007070 Vanilla planifolia
HPP92_007071 Vanilla planifolia
HPP92_024392 Vanilla planifolia
Hund12352 Selenicereus undatus
Lalb_Chr07g0185881 Lupinus albus
Lalb_Chr12g0204541 Lupinus albus
Lj4g0014945 Lotus japonicus
Lj6C271T5 Lonicera japonica
Lju470C12G3 Lonicera japonica
Lsat_1_v5_gn_1_76480 Lactuca sativa
Manes.01G018400 Manihot esculenta
Manes.05G121300 Manihot esculenta
MBI07_g36529_MAGBIO Magnolia biondii
MBI10_g32339_MAGBIO Magnolia biondii
MBI10_g32340_MAGBIO Magnolia biondii
MD02G1002900 Malus domestica
MD05G1054200 Malus domestica
MD05G1054300 Malus domestica
MD15G1146100 Malus domestica
Medtr8g088590 Medicago truncatula
MELO3C004973.2 Cucumis melo
MELO3C018698.2 Cucumis melo
MELO3C024654.2 Cucumis melo
MELO3C032982.2 Cucumis melo
Migut.N03048 Erythranthe guttata
MSTRG.24559 Avicennia marina
Nitab4.5_0000013g0280 Nicotiana tabacum
Nitab4.5_0000218g0010 Nicotiana tabacum
Nitab4.5_0000218g0050 Nicotiana tabacum
Nitab4.5_0001487g0030 Nicotiana tabacum
Nitab4.5_0001621g0040 Nicotiana tabacum
Nn1g09506 Nelumbo nucifera
Nn7g37480 Nelumbo nucifera
Oeu022457.1 Olea europaea
Oeu022459.1 Olea europaea
Oeu050309.1 Olea europaea
Os01g0892800 Oryza sativa ssp. japonica
Os02g0608500 Oryza sativa ssp. japonica
Peaxi162Scf00075g01239 Petunia axillaris
Peaxi162Scf00883g00812 Petunia axillaris
PGR042G2827 Punica granatum
PGR142G0521 Punica granatum
PGSC0003DMG400020370 Solanum tuberosum
PGSC0003DMG400025222 Solanum tuberosum
Phvul.002G247900 Phaseolus vulgaris
Potri.007G142100 Populus trichocarpa
Potri.017G007800 Populus trichocarpa
Prupe.7G268300 Prunus persica
Psat7g063280 Pisum sativum
PSO675G1292 Papaver somniferum
PSO732G0109 Papaver somniferum
QL10p059602 Quercus lobata
RcHm_v2.0_Chr2g0084791 Rosa chinensis
Rhsim09G0005200 Rhododendron simsii
Sabra07G0113900 Salix brachista
Sabra07G0117000 Salix brachista
Sabra17G0008700 Salix brachista
Sabra17G0009000 Salix brachista
SalBow6G3924 Salvia bowleyana
Sc19g0002320 Simmondsia chinensis
Sed0004538 Sechium edule
Sed0008199 Sechium edule
SEGI_25353 Sequoiadendron giganteum
SEGI_34247 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11010 Striga asiatica
Solyc08g014450.4 Solanum lycopersicum
Solyc12g019410.3 Solanum lycopersicum
Sopen08g005440 Solanum pennellii
Sopen12g009680 Solanum pennellii
Sp4g14140 Schrenkiella parvula
Sp4g25920 Schrenkiella parvula
Sp5g03310 Schrenkiella parvula
TAR362G1120 Trochodendron aralioides
THA.LOC104800928 Tarenaya hassleriana
THA.LOC104826182 Tarenaya hassleriana
Thecc.04G159100 Theobroma cacao
Thhalv10001418m.g Eutrema salsugineum
Thhalv10005933m.g Eutrema salsugineum
Thhalv10016596m.g Eutrema salsugineum
TPR.G6744 Trifolium pratense
TWI63G0664 Tripterygium wilfordii
unitig_8.g3618 Utricularia gibba
vmacro00713 Vaccinium macrocarpon
Zm00001eb145050 Zea mays
Zm00001eb246710 Zea mays

User provided reference genes

Program Settings