Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p25010 Brassica napus
A09p52490 Brassica napus
A09p60400 Brassica napus
Aa31LG10G14350 Aethionema arabicum
Actinidia12626 Actinidia chinensis
Ah.05g177660 Amaranthus hybridus
AL5G42430 Arabidopsis lyrata
Aqoxy3G02615 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FM8SRX Arachis hypogaea
AT3G60220 Arabidopsis thaliana
ATR0665G106 Amborella trichopoda
Atru.chr5.46 Acer truncatum
Atru.chr5.77 Acer truncatum
AUR62013786 Chenopodium quinoa
AUR62023370 Chenopodium quinoa
BcaB02g07427 Brassica carinata
BcaC07g40416 Brassica carinata
BcaC07g40515 Brassica carinata
BcaC07g40521 Brassica carinata
BcaC08g45028 Brassica carinata
BcaC08g45039 Brassica carinata
BolC6t37823H Brassica oleracea
BolC8t51118H Brassica oleracea
BraA07t30141Z Brassica rapa
BraA09t40679Z Brassica rapa
BraA09t41411Z Brassica rapa
C06p26580 Brassica napus
C08p35240 Brassica napus
C08p43880 Brassica napus
CANSAT25G2728 Cannabis sativa
CARHR170530 Cardamine hirsuta
Carub.0005s2696 Capsella rubella
Ca_02285_v3 Cicer arietinum L.
Ca_23140_v3 Cicer arietinum L.
Cc02_g25580 Coffea canephora
CDE11G0089 Ceratophyllum demersum
Cfa011026 Carpinus fangiana
Ciclev10020616m.g Citrus clementina
CiPaw.13G022200 Carya illinoinensis
CiPaw.14G017100 Carya illinoinensis
ClCG00G002490 Citrullus lanatus
COL.COLO4_12355 Corchorus olitorius
Cpa.g.sc52.73 Carica papaya
CsaV3_3G010450 Cucumis sativus L.
CSS0017499 Camellia sinensis var. sinensis
CSS0025082 Camellia sinensis var. sinensis
CSS0030592 Camellia sinensis var. sinensis
CSS0038088 Camellia sinensis var. sinensis
CSS0045295 Camellia sinensis var. sinensis
CSS0045401 Camellia sinensis var. sinensis
CSS0048631 Camellia sinensis var. sinensis
DCAR_025029 Daucus carota
DCAR_031018 Daucus carota
Dinv43591 Davidia involucrata
Dinv44025 Davidia involucrata
Duzib133G0943 Durio zibethinus
Duzib138G0523 Durio zibethinus
Duzib268G1824 Durio zibethinus
ECA234G2270 Erigeron canadensis
ECA248G1798 Erigeron canadensis
EL10Ac1g00717 Beta vulgaris
Eucgr.E01678 Eucalyptus grandis
Eucgr.E01704 Eucalyptus grandis
FAN01G0686 Fragaria x ananassa
FAN03G0924 Fragaria x ananassa
FAN04G1212 Fragaria x ananassa
FAN06G2163 Fragaria x ananassa
FAN10G0744 Fragaria x ananassa
FAN10G2821 Fragaria x ananassa
FAN18G0327 Fragaria x ananassa
FvH4_1g15850 Fragaria vesca
FvH4_5g10171 Fragaria vesca
FvH4_7g08860 Fragaria vesca
Glyma.03G103800 Glycine max
Glyma.07G120300 Glycine max
Glyma.15G183300 Glycine max
Gohir.A08G056200 Gossypium hirsutum
Gohir.A08G140601 Gossypium hirsutum
Gohir.A11G074150 Gossypium hirsutum
Gohir.A12G099100 Gossypium hirsutum
Gohir.D08G065600 Gossypium hirsutum
Gohir.D08G161600 Gossypium hirsutum
Gohir.D11G078850 Gossypium hirsutum
Gohir.D12G102100 Gossypium hirsutum
Gorai.004G067900 Gossypium raimondii
Gorai.004G168000 Gossypium raimondii
Gorai.007G084400 Gossypium raimondii
Gorai.008G111300 Gossypium raimondii
GSVIVG01018343001 Vitis vinifera
HanXRQChr01g0017541 Helianthus annuus
HanXRQChr12g0383291 Helianthus annuus
HanXRQChr16g0521031 Helianthus annuus
Haze_02899 Corylus avellana
Hma1.2p1_0173F.1_g076500 Hydrangea macrophylla
Hma1.2p1_1254F.1_g270570 Hydrangea macrophylla
HPP92_014650 Vanilla planifolia
HPP92_025661 Vanilla planifolia
Lalb_Chr13g0290821 Lupinus albus
Lj3g0001676 Lotus japonicus
Lj7A551T53 Lonicera japonica
Lj9A550G67 Lonicera japonica
Lsat_1_v5_gn_1_82780 Lactuca sativa
Lsat_1_v5_gn_4_38480 Lactuca sativa
Manes.05G058200 Manihot esculenta
MD02G1223200 Malus domestica
MD07G1091500 Malus domestica
Medtr2g044570 Medicago truncatula
Medtr7g052370 Medicago truncatula
Medtr7g052380 Medicago truncatula
Medtr7g445860 Medicago truncatula
Medtr7g445870 Medicago truncatula
Medtr8g009190 Medicago truncatula
Medtr8g027980 Medicago truncatula
MELO3C006269.2 Cucumis melo
Migut.B01490 Erythranthe guttata
Migut.N01717 Erythranthe guttata
MSTRG.17110 Avicennia marina
MSTRG.20664 Avicennia marina
Nitab4.5_0000204g0080 Nicotiana tabacum
Nitab4.5_0000735g0050 Nicotiana tabacum
Nitab4.5_0005064g0030 Nicotiana tabacum
Nitab4.5_0007434g0010 Nicotiana tabacum
Nn1g00681 Nelumbo nucifera
Nn6g33707 Nelumbo nucifera
Oeu004637.1 Olea europaea
Oeu018161.1 Olea europaea
Oeu037415.1 Olea europaea
Os04g0586700 Oryza sativa ssp. japonica
Peaxi162Scf00103g00144 Petunia axillaris
Peaxi162Scf01569g00002 Petunia axillaris
PGR042G1612 Punica granatum
PGSC0003DMG400001719 Solanum tuberosum
Phvul.009G223100 Phaseolus vulgaris
Phvul.010G041800 Phaseolus vulgaris
Potri.002G140600 Populus trichocarpa
Potri.014G053600 Populus trichocarpa
Prupe.2G116700 Prunus persica
Psat1g137960 Pisum sativum
Psat4g221720 Pisum sativum
Psat4g221760 Pisum sativum
PSO063G1334 Papaver somniferum
PSO063G5971 Papaver somniferum
PSO421G0309 Papaver somniferum
PSO782G0387 Papaver somniferum
QL02p075861 Quercus lobata
QL04p026273 Quercus lobata
RcHm_v2.0_Chr1g0344271 Rosa chinensis
RcHm_v2.0_Chr2g0168321 Rosa chinensis
RcHm_v2.0_Chr7g0197351 Rosa chinensis
Rhsim01G0143200 Rhododendron simsii
Rhsim07G0039200 Rhododendron simsii
Rhsim07G0039300 Rhododendron simsii
Sabra14G0040100 Salix brachista
Sc02g0003250 Simmondsia chinensis
Sed0000015 Sechium edule
Sed0027435 Sechium edule
SGA_v2.0_scaffold52G19265 Striga asiatica
SGA_v2.0_scaffold77G25256 Striga asiatica
SHI13653 Sapria himalayana
Solyc01g088630.3 Solanum lycopersicum
Sopen01g035480 Solanum pennellii
Sp5g03000 Schrenkiella parvula
TAR629G3030 Trochodendron aralioides
TAR636G2273 Trochodendron aralioides
THA.LOC104817178 Tarenaya hassleriana
Thecc.01G402200 Theobroma cacao
Thhalv10005706m.g Eutrema salsugineum
Thhalv10006088m.g Eutrema salsugineum
TPR.G26891 Trifolium pratense
TWI14G1355 Tripterygium wilfordii
TWI59G0209 Tripterygium wilfordii
unitig_0.g1333 Utricularia gibba
unitig_26.g8856 Utricularia gibba
unitig_750.g28407 Utricularia gibba
vmacro13531 Vaccinium macrocarpon
VMungo0331G0045 Vigna mungo
VMungo1309G1397 Vigna mungo
VMungo1309G1423 Vigna mungo
Zm00001eb072640 Zea mays
Zm00001eb251040 Zea mays
Zm00001eb428240 Zea mays

User provided reference genes

Program Settings