Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04120 Brassica napus
Aa31sc72G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_111.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.381 Anthoceros agrestis
Actinidia12002 Actinidia chinensis
Actinidia27978 Actinidia chinensis
Ah.03g146260 Amaranthus hybridus
Ah.09g232050 Amaranthus hybridus
AL7G16990 Arabidopsis lyrata
Aqoxy6G02799 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IMHW03 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q24X8K Arachis hypogaea
AT4G34280 Arabidopsis thaliana
Atru.chr3.214 Acer truncatum
Atru.chr3.215 Acer truncatum
Atru.chr3.226 Acer truncatum
Atru.chr5.2428 Acer truncatum
AUR62003959 Chenopodium quinoa
AUR62027366 Chenopodium quinoa
AUR62031283 Chenopodium quinoa
AUR62038271 Chenopodium quinoa
BcaC03g17819 Brassica carinata
BcaNung04160 Brassica carinata
BcaNung04991 Brassica carinata
BcaNung04992 Brassica carinata
BolC1t00435H Brassica oleracea
BolC2t11906H Brassica oleracea
BolC3t20255H Brassica oleracea
BolC9t55360H Brassica oleracea
BraA01t00401Z Brassica rapa
C01p04490 Brassica napus
C02p15790 Brassica napus
C02p58430 Brassica napus
C09p24450 Brassica napus
C09p44740 Brassica napus
C09p50480 Brassica napus
CAN.G1482.2 Capsicum annuum
CANSAT01G2799 Cannabis sativa
CARHR242490 Cardamine hirsuta
Carub.0007s0608 Capsella rubella
Ca_11052_v3 Cicer arietinum L.
Cc02_g19520 Coffea canephora
Cc07_g06660 Coffea canephora
Cfa004087 Carpinus fangiana
Cfa004615 Carpinus fangiana
Ciclev10024935m.g Citrus clementina
Ciclev10027851m.g Citrus clementina
CiPaw.01G008500 Carya illinoinensis
CiPaw.05G014100 Carya illinoinensis
COL.COLO4_11519 Corchorus olitorius
COL.COLO4_32560 Corchorus olitorius
Cpa.g.sc292.9 Carica papaya
Cpa.g.sc3364.1 Carica papaya
Cpa.g.sc6.61 Carica papaya
Cpa.g.sc6.62 Carica papaya
CSS0023905 Camellia sinensis var. sinensis
CSS0037584 Camellia sinensis var. sinensis
CSS0044154 Camellia sinensis var. sinensis
CSS0044953 Camellia sinensis var. sinensis
DCAR_001664 Daucus carota
DCAR_010841 Daucus carota
DCAR_017864 Daucus carota
Dinv15779 Davidia involucrata
Dinv30056 Davidia involucrata
Duzib132G1062 Durio zibethinus
Duzib147G0573 Durio zibethinus
ECA236G4994 Erigeron canadensis
ECA238G3157 Erigeron canadensis
EL10Ac6g15669 Beta vulgaris
Eucgr.G01293 Eucalyptus grandis
Eucgr.H02268 Eucalyptus grandis
FAN15G0682 Fragaria x ananassa
FAN19G0232 Fragaria x ananassa
FAN20G0240 Fragaria x ananassa
FAN24G1860 Fragaria x ananassa
FAN26G2049 Fragaria x ananassa
FAN27G2112 Fragaria x ananassa
FAN28G0575 Fragaria x ananassa
FvH4_1g17060 Fragaria vesca
FvH4_2g04670 Fragaria vesca
Glyma.10G259600 Glycine max
Glyma.20G131200 Glycine max
Gohir.A02G153700 Gossypium hirsutum
Gohir.A03G184800 Gossypium hirsutum
Gohir.D02G206300 Gossypium hirsutum
Gohir.D03G026700 Gossypium hirsutum
Gorai.003G028400 Gossypium raimondii
Gorai.005G233700 Gossypium raimondii
GSVIVG01000167001 Vitis vinifera
GSVIVG01037885001 Vitis vinifera
HanXRQChr04g0128551 Helianthus annuus
HanXRQChr14g0449611 Helianthus annuus
Haze_10212 Corylus avellana
Haze_15327 Corylus avellana
Hma1.2p1_0239F.1_g099850 Hydrangea macrophylla
Hund06710 Selenicereus undatus
Hund13924 Selenicereus undatus
Hund29372 Selenicereus undatus
Hund29375 Selenicereus undatus
Lalb_Chr02g0145171 Lupinus albus
Lj5A216G104 Lonicera japonica
Lj5g0023418 Lotus japonicus
Lj7C86G5 Lonicera japonica
Lj9C43T3 Lonicera japonica
Lj9C47T4 Lonicera japonica
Lsat_1_v5_gn_2_83541 Lactuca sativa
Lsat_1_v5_gn_7_85901 Lactuca sativa
Manes.10G073266 Manihot esculenta
Manes.13G115200 Manihot esculenta
MD02G1180800 Malus domestica
MD05G1093800 Malus domestica
Medtr1g106905 Medicago truncatula
Migut.B00411 Erythranthe guttata
Migut.H00379 Erythranthe guttata
MSTRG.16699 Avicennia marina
Nitab4.5_0000284g0010 Nicotiana tabacum
Nitab4.5_0000604g0020 Nicotiana tabacum
Nitab4.5_0001480g0050 Nicotiana tabacum
Nitab4.5_0010275g0030 Nicotiana tabacum
Nn5g30480 Nelumbo nucifera
Oeu003572.1 Olea europaea
Oeu011151.1 Olea europaea
Oeu027122.1 Olea europaea
Peaxi162Scf00016g02531 Petunia axillaris
Peaxi162Scf00449g00016 Petunia axillaris
PGR042G0884 Punica granatum
PGR102G2010 Punica granatum
PGSC0003DMG400013016 Solanum tuberosum
PGSC0003DMG400025758 Solanum tuberosum
PGSC0003DMG400026677 Solanum tuberosum
Phvul.007G042500 Phaseolus vulgaris
Potri.001G297600 Populus trichocarpa
Potri.007G051500 Populus trichocarpa
Potri.009G092500 Populus trichocarpa
Pp3c18_4410 Physcomitrium patens
Pp3c22_17660 Physcomitrium patens
PRCOL_00006635 Prasinoderma coloniale
Prupe.6G225400 Prunus persica
Prupe.8G138700 Prunus persica
Psat6g216560 Pisum sativum
PSO541G3211 Papaver somniferum
PSO675G3219 Papaver somniferum
QL11p032306 Quercus lobata
QL11p032339 Quercus lobata
RcHm_v2.0_Chr2g0107231 Rosa chinensis
RcHm_v2.0_Chr6g0254281 Rosa chinensis
RcHm_v2.0_Chr6g0254291 Rosa chinensis
RcHm_v2.0_Chr6g0254331 Rosa chinensis
RcHm_v2.0_Chr6g0254361 Rosa chinensis
RcHm_v2.0_Chr6g0254371 Rosa chinensis
Rhsim05G0089400 Rhododendron simsii
Rhsim10G0104800 Rhododendron simsii
Rhsim10G0161500 Rhododendron simsii
Rhsim10G0161700 Rhododendron simsii
Rhsim10G0162500 Rhododendron simsii
Sabra07G0045400 Salix brachista
Sabra09G0071200 Salix brachista
SalBow1G5992 Salvia bowleyana
SalBow6G0742 Salvia bowleyana
SalBow6G5634 Salvia bowleyana
Sc07g0000620 Simmondsia chinensis
Sc07g0000630 Simmondsia chinensis
SEGI_28319 Sequoiadendron giganteum
SEGI_36307 Sequoiadendron giganteum
SGA_v2.0_scaffold143G35782 Striga asiatica
SGA_v2.0_scaffold225G43001 Striga asiatica
SMO145G0124 Selaginella moellendorffii
Solyc01g067990.1 Solanum lycopersicum
Solyc01g107360.4 Solanum lycopersicum
Solyc02g064800.3 Solanum lycopersicum
Sopen01g049600 Solanum pennellii
Sopen02g014910 Solanum pennellii
Sp7g32080 Schrenkiella parvula
TAR381G0090 Trochodendron aralioides
THA.LOC104819541 Tarenaya hassleriana
Thecc.01G067200 Theobroma cacao
Thecc.02G112400 Theobroma cacao
Thhalv10024491m.g Eutrema salsugineum
TPR.G27110 Trifolium pratense
TWI75G1561 Tripterygium wilfordii
vmacro05379 Vaccinium macrocarpon
vmacro19460 Vaccinium macrocarpon
VMungo0720G2973 Vigna mungo

User provided reference genes

Program Settings