Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40930 Brassica napus
Aa31LG2G2050 Aethionema arabicum
Aa31LG5G14720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2298 Anthoceros agrestis
Actinidia20848 Actinidia chinensis
Actinidia35820 Actinidia chinensis
Ah.13g077780 Amaranthus hybridus
AL3G14190 Arabidopsis lyrata
Aqoxy2G03998 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3CZ4H2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.97NMUU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B933NQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KMGM6D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LG1RTX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XW6TTL Arachis hypogaea
AT3G04240 Arabidopsis thaliana
ATR0561G246 Amborella trichopoda
Atru.chr2.1140 Acer truncatum
AUR62006999 Chenopodium quinoa
AUR62018537 Chenopodium quinoa
AUR62020880 Chenopodium quinoa
BcaNung04816 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00780 Brassica napus
BolC1t05759H Brassica oleracea
BraA01t04529Z Brassica rapa
CAN.G1310.13 Capsicum annuum
CAN.G148.2 Capsicum annuum
CAN.G2073.2 Capsicum annuum
CAN.G2073.3 Capsicum annuum
CAN.G2073.4 Capsicum annuum
CAN.G624.10 Capsicum annuum
CAN.G624.11 Capsicum annuum
CANSAT54G1818 Cannabis sativa
CANSAT78G1699 Cannabis sativa
CARHR078390 Cardamine hirsuta
Carub.0003s0346 Capsella rubella
Ca_09980_v3 Cicer arietinum L.
CBR_g46307 Chara braunii
Cc03_g09530 Coffea canephora
CDE05G0087 Ceratophyllum demersum
CDE05G1163 Ceratophyllum demersum
Cfa008669 Carpinus fangiana
Cfa024743 Carpinus fangiana
Ciclev10018711m.g Citrus clementina
CiPaw.01G112500 Carya illinoinensis
ClCG03G011450 Citrullus lanatus
COL.COLO4_35966 Corchorus olitorius
COL.COLO4_38176 Corchorus olitorius
COL.COLO4_38177 Corchorus olitorius
Cpa.g.sc51.46 Carica papaya
CsaV3_1G045020 Cucumis sativus L.
CSS0034552 Camellia sinensis var. sinensis
CSS0050373 Camellia sinensis var. sinensis
DCAR_026670 Daucus carota
Dinv10856 Davidia involucrata
Dinv32173 Davidia involucrata
Duzib128G0757 Durio zibethinus
Duzib151G0791 Durio zibethinus
Duzib177G0921 Durio zibethinus
Duzib268G0561 Durio zibethinus
ECA238G2410 Erigeron canadensis
EL10Ac3g07439 Beta vulgaris
EL10Ac4g09791 Beta vulgaris
Eucgr.L00641 Eucalyptus grandis
FAN02G2773 Fragaria x ananassa
FAN05G1824 Fragaria x ananassa
FAN05G2056 Fragaria x ananassa
FAN09G2957 Fragaria x ananassa
FAN14G1983 Fragaria x ananassa
FvH4_6g01310 Fragaria vesca
Glyma.09G108700 Glycine max
Glyma.10G168700 Glycine max
Glyma.20G221000 Glycine max
Gohir.A10G130700 Gossypium hirsutum
Gohir.A11G243000 Gossypium hirsutum
Gohir.A13G162400 Gossypium hirsutum
Gohir.D05G303601 Gossypium hirsutum
Gohir.D10G135700 Gossypium hirsutum
Gohir.D11G252600 Gossypium hirsutum
Gohir.D13G171700 Gossypium hirsutum
Gorai.007G271100 Gossypium raimondii
Gorai.009G322900 Gossypium raimondii
Gorai.011G150500 Gossypium raimondii
Gorai.013G189100 Gossypium raimondii
GSVIVG01023480001 Vitis vinifera
GSVIVG01026359001 Vitis vinifera
HanXRQChr01g0021981 Helianthus annuus
HanXRQChr09g0260781 Helianthus annuus
HanXRQChr14g0436771 Helianthus annuus
Haze_11688 Corylus avellana
Haze_26630 Corylus avellana
Hma1.2p1_0089F.1_g045360 Hydrangea macrophylla
Hma1.2p1_0984F.1_g244260 Hydrangea macrophylla
HPP92_000441 Vanilla planifolia
HPP92_006960 Vanilla planifolia
Hund07163 Selenicereus undatus
Hund19026 Selenicereus undatus
Lalb_Chr21g0311321 Lupinus albus
Lj5g0011380 Lotus japonicus
Lj6A347G37 Lonicera japonica
Lj6A347T40 Lonicera japonica
Lsat_1_v5_gn_2_49120 Lactuca sativa
Lsat_1_v5_gn_4_119940 Lactuca sativa
Manes.08G142800 Manihot esculenta
Manes.08G146600 Manihot esculenta
Manes.09G145400 Manihot esculenta
Manes.15G180448 Manihot esculenta
Mapoly0034s0037 Marchantia polymorpha
MBI07_g12178_MAGBIO Magnolia biondii
MD04G1235300 Malus domestica
MD12G1253100 Malus domestica
Medtr1g079510 Medicago truncatula
MELO3C005185.2 Cucumis melo
MELO3C010102.2 Cucumis melo
Migut.G00821 Erythranthe guttata
Migut.G01152 Erythranthe guttata
MSTRG.4272 Avicennia marina
MSTRG.9774 Avicennia marina
Nitab4.5_0000309g0320 Nicotiana tabacum
Nitab4.5_0002260g0250 Nicotiana tabacum
Nitab4.5_0003358g0040 Nicotiana tabacum
Nn1g08118 Nelumbo nucifera
Nn8g41257 Nelumbo nucifera
Oeu002933.1 Olea europaea
Oeu022675.1 Olea europaea
Oeu043377.1 Olea europaea
Os01g0915400 Oryza sativa ssp. japonica
Os02g0489550 Oryza sativa ssp. japonica
Peaxi162Scf00286g00829 Petunia axillaris
Peaxi162Scf00423g00724 Petunia axillaris
PGSC0003DMG400015752 Solanum tuberosum
Phvul.L002532 Phaseolus vulgaris
Potri.013G051400 Populus trichocarpa
Potri.019G025600 Populus trichocarpa
Pp3c5_10370 Physcomitrium patens
Pp3c6_13940 Physcomitrium patens
PRCOL_00000371 Prasinoderma coloniale
Prupe.6G355200 Prunus persica
Psat6g140680 Pisum sativum
PSO017G5742 Papaver somniferum
PSO675G4779 Papaver somniferum
QL03p033428 Quercus lobata
QL06p027597 Quercus lobata
QL06p027608 Quercus lobata
RcHm_v2.0_Chr3g0448861 Rosa chinensis
Rhsim04G0132100 Rhododendron simsii
Sabra13G0046700 Salix brachista
Sabra19G0035000 Salix brachista
Sabra19G0038000 Salix brachista
Sabra19G0038200 Salix brachista
SalBow2G2507 Salvia bowleyana
Sc13g0000520 Simmondsia chinensis
Sc13g0000570 Simmondsia chinensis
Sc16g0010040 Simmondsia chinensis
Sed0012930 Sechium edule
SEGI_12158 Sequoiadendron giganteum
SEGI_29220 Sequoiadendron giganteum
SEGI_32932 Sequoiadendron giganteum
SGA_v2.0_scaffold102G29911 Striga asiatica
SMO347G0623 Selaginella moellendorffii
Solyc05g053835.2 Solanum lycopersicum
Solyc09g097830.4 Solanum lycopersicum
Sopen05g032310 Solanum pennellii
Sopen09g035770 Solanum pennellii
Sp3g03150 Schrenkiella parvula
TAR362G0319 Trochodendron aralioides
TAR633G0333 Trochodendron aralioides
THA.LOC104820750 Tarenaya hassleriana
THA.LOC104821603 Tarenaya hassleriana
Thecc.04G190700 Theobroma cacao
Thecc.05G264600 Theobroma cacao
Thhalv10019996m.g Eutrema salsugineum
TPR.G31601 Trifolium pratense
TWI34G1660 Tripterygium wilfordii
TWI34G1961 Tripterygium wilfordii
TWI60G1592 Tripterygium wilfordii
unitig_37.g12000 Utricularia gibba
unitig_92.g28225 Utricularia gibba
vmacro00425 Vaccinium macrocarpon
VMungo0720G0796 Vigna mungo
Zm00001eb083020 Zea mays
Zm00001eb179230 Zea mays
Zm00001eb241190 Zea mays

User provided reference genes

Program Settings