Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17930 Brassica napus
A04p24580 Brassica napus
A04p24590 Brassica napus
Aa31LG5G5160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.388 Anthoceros agrestis
Actinidia08839 Actinidia chinensis
Actinidia36763 Actinidia chinensis
Ah.15g095490 Amaranthus hybridus
AL4G27170 Arabidopsis lyrata
Aqoxy5G03652 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CIB6XC Arachis hypogaea
AT2G31880 Arabidopsis thaliana
ATR0199G026 Amborella trichopoda
Atru.chr9.1809 Acer truncatum
AUR62001233 Chenopodium quinoa
BcaB01g04010 Brassica carinata
BcaB06g28572 Brassica carinata
BcaC01g05928 Brassica carinata
BcaC02g07960 Brassica carinata
BolC3t14480H Brassica oleracea
BolC4t27631H Brassica oleracea
BolC4t27632H Brassica oleracea
BraA03t11057Z Brassica rapa
BraA04t17978Z Brassica rapa
C03p21000 Brassica napus
C04p61460 Brassica napus
C04p61470 Brassica napus
CAN.G126.94 Capsicum annuum
CAN.G993.16 Capsicum annuum
CANSAT80G0665 Cannabis sativa
CARHR125570 Cardamine hirsuta
CARHR125590 Cardamine hirsuta
Carub.0004s1318 Capsella rubella
Ca_16112_v3 Cicer arietinum L.
Cc02_g32040 Coffea canephora
Cc04_g10890 Coffea canephora
CDE09G0024 Ceratophyllum demersum
CDE09G0100 Ceratophyllum demersum
Cfa009515 Carpinus fangiana
Cfa019285 Carpinus fangiana
Ciclev10019280m.g Citrus clementina
Ciclev10019677m.g Citrus clementina
Ciclev10019853m.g Citrus clementina
Ciclev10019897m.g Citrus clementina
Ciclev10020580m.g Citrus clementina
Ciclev10021254m.g Citrus clementina
Ciclev10021753m.g Citrus clementina
Ciclev10022278m.g Citrus clementina
Ciclev10023696m.g Citrus clementina
Ciclev10023722m.g Citrus clementina
Ciclev10023893m.g Citrus clementina
Ciclev10023971m.g Citrus clementina
CiPaw.11G014500 Carya illinoinensis
CiPaw.12G033500 Carya illinoinensis
ClCG06G017540 Citrullus lanatus
COL.COLO4_05418 Corchorus olitorius
COL.COLO4_19805 Corchorus olitorius
Cpa.g.sc4.22 Carica papaya
CsaV3_1G000910 Cucumis sativus L.
CSS0001876 Camellia sinensis var. sinensis
CSS0003888 Camellia sinensis var. sinensis
CSS0019012 Camellia sinensis var. sinensis
DCAR_007458 Daucus carota
Dinv11127 Davidia involucrata
Dinv38500 Davidia involucrata
Duzib068G0968 Durio zibethinus
Duzib205G0333 Durio zibethinus
ECA232G0521 Erigeron canadensis
ECA247G2690 Erigeron canadensis
ECA247G3208 Erigeron canadensis
EL10Ac7g18030 Beta vulgaris
Eucgr.B00174 Eucalyptus grandis
Eucgr.K02774 Eucalyptus grandis
Eucgr.K02775 Eucalyptus grandis
Eucgr.L02485 Eucalyptus grandis
FAN04G2376 Fragaria x ananassa
FAN08G3040 Fragaria x ananassa
FAN13G0854 Fragaria x ananassa
FAN18G0676 Fragaria x ananassa
FvH4_5g06700 Fragaria vesca
Glyma.04G190400 Glycine max
Glyma.06G175100 Glycine max
Gohir.A03G063800 Gossypium hirsutum
Gohir.A12G186500 Gossypium hirsutum
Gohir.D03G102500 Gossypium hirsutum
Gohir.D12G189500 Gossypium hirsutum
Gorai.003G108000 Gossypium raimondii
Gorai.008G203300 Gossypium raimondii
GSVIVG01007593001 Vitis vinifera
HanXRQChr02g0035371 Helianthus annuus
HanXRQChr04g0100951 Helianthus annuus
HanXRQChr05g0145501 Helianthus annuus
HanXRQChr09g0272651 Helianthus annuus
HanXRQChr16g0497561 Helianthus annuus
Haze_07630 Corylus avellana
Hma1.2p1_2431F.1_g322035 Hydrangea macrophylla
HPP92_024526 Vanilla planifolia
Lalb_Chr08g0236871 Lupinus albus
Lalb_Chr23g0273431 Lupinus albus
Lj1g0006775 Lotus japonicus
Lj5A133G90 Lonicera japonica
Lj9P440T34 Lonicera japonica
Lsat_1_v5_gn_1_28600 Lactuca sativa
Lsat_1_v5_gn_4_78640 Lactuca sativa
Manes.06G112200 Manihot esculenta
Manes.14G057400 Manihot esculenta
Mapoly0115s0067 Marchantia polymorpha
MBI06_g04696_MAGBIO Magnolia biondii
MD14G1167300 Malus domestica
Medtr3g075440 Medicago truncatula
MELO3C026243.2 Cucumis melo
Migut.D02032 Erythranthe guttata
Migut.O00198 Erythranthe guttata
MSTRG.11513 Avicennia marina
MSTRG.9700 Avicennia marina
Nitab4.5_0000003g0890 Nicotiana tabacum
Nitab4.5_0000510g0090 Nicotiana tabacum
Nitab4.5_0000510g0100 Nicotiana tabacum
Nitab4.5_0000510g0110 Nicotiana tabacum
Nitab4.5_0003542g0020 Nicotiana tabacum
Nitab4.5_0004177g0010 Nicotiana tabacum
Nn1g05646 Nelumbo nucifera
Nn1g06355 Nelumbo nucifera
Nn3g16641 Nelumbo nucifera
Nn4g22532 Nelumbo nucifera
Nn5g27273 Nelumbo nucifera
Nn6g31998 Nelumbo nucifera
Nn6g35704 Nelumbo nucifera
Nn8g40248 Nelumbo nucifera
Oeu044818.1 Olea europaea
Oeu046501.1 Olea europaea
Oeu056956.1 Olea europaea
Oeu056958.1 Olea europaea
Oeu063273.1 Olea europaea
Os06g0288100 Oryza sativa ssp. japonica
Peaxi162Scf00089g00111 Petunia axillaris
Peaxi162Scf00763g00048 Petunia axillaris
PGR044G2134 Punica granatum
PGSC0003DMG400015157 Solanum tuberosum
PGSC0003DMG400027071 Solanum tuberosum
Phvul.009G171200 Phaseolus vulgaris
Potri.012G090500 Populus trichocarpa
Potri.015G086800 Populus trichocarpa
Pp3c10_16000 Physcomitrium patens
Pp3c14_17190 Physcomitrium patens
Prupe.5G161700 Prunus persica
Psat5g118160 Pisum sativum
PSO063G4241 Papaver somniferum
PSO067G0057 Papaver somniferum
QL10p005929 Quercus lobata
QL10p005937 Quercus lobata
RcHm_v2.0_Chr7g0191951 Rosa chinensis
RcHm_v2.0_Chr7g0191971 Rosa chinensis
Rhsim12G0170000 Rhododendron simsii
Rhsim12G0170100 Rhododendron simsii
Sabra12G0065300 Salix brachista
Sabra15G0109500 Salix brachista
SalBow5G1793 Salvia bowleyana
Sc22g0004230 Simmondsia chinensis
Sed0026149 Sechium edule
SEGI_05779 Sequoiadendron giganteum
SEGI_19915 Sequoiadendron giganteum
SGA_v2.0_scaffold7G04171 Striga asiatica
SGA_v2.0_scaffold90G27804 Striga asiatica
SMO134G0167 Selaginella moellendorffii
Solyc03g111800.2 Solanum lycopersicum
Solyc06g071810.1 Solanum lycopersicum
Sopen03g030900 Solanum pennellii
Sopen06g028100 Solanum pennellii
Sp4g14230 Schrenkiella parvula
TAR371G0353 Trochodendron aralioides
TAR374G0353 Trochodendron aralioides
TAR629G0904 Trochodendron aralioides
THA.LOC104801545 Tarenaya hassleriana
Thecc.03G118500 Theobroma cacao
Thhalv10016374m.g Eutrema salsugineum
TPR.G24763 Trifolium pratense
TPR.G35171 Trifolium pratense
TWI39G0879 Tripterygium wilfordii
unitig_62.g23228 Utricularia gibba
vmacro16687 Vaccinium macrocarpon
vmacro16688 Vaccinium macrocarpon
VMungo1309G0045 Vigna mungo
Zm00001eb380860 Zea mays

User provided reference genes

Program Settings