Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia13348 Actinidia chinensis
Actinidia14250 Actinidia chinensis
Actinidia25864 Actinidia chinensis
Ah.06g185810 Amaranthus hybridus
Ah.07g201480 Amaranthus hybridus
Ah.11g049040 Amaranthus hybridus
Ah.13g071450 Amaranthus hybridus
Aqoxy2G02664 Aquilegia oxysepala
Aqoxy2G02667 Aquilegia oxysepala
Aqoxy5G02697 Aquilegia oxysepala
Aqoxy6G01340 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DQ3PTC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RVTS57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WF3AWK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea
ATR0693G086 Amborella trichopoda
Atru.chr2.269 Acer truncatum
Atru.chr4.3053 Acer truncatum
Atru.chr5.960 Acer truncatum
AUR62011764 Chenopodium quinoa
AUR62016237 Chenopodium quinoa
AUR62024610 Chenopodium quinoa
AUR62039253 Chenopodium quinoa
CANSAT78G1884 Cannabis sativa
Ca_00964_v3 Cicer arietinum L.
Ca_10269_v3 Cicer arietinum L.
Ca_21412_v3 Cicer arietinum L.
Cc03_g00620 Coffea canephora
CDE02G3511 Ceratophyllum demersum
CDE09G0065 Ceratophyllum demersum
Cfa015285 Carpinus fangiana
Ciclev10005745m.g Citrus clementina
Ciclev10021807m.g Citrus clementina
CiPaw.01G136100 Carya illinoinensis
CiPaw.02G072900 Carya illinoinensis
ClCG09G004940 Citrullus lanatus
ClCG10G011600 Citrullus lanatus
COL.COLO4_23198 Corchorus olitorius
COL.COLO4_34582 Corchorus olitorius
Cpa.g.sc18.87 Carica papaya
Cpa.g.sc9.28 Carica papaya
CsaV3_3G026560 Cucumis sativus L.
CsaV3_7G030120 Cucumis sativus L.
CSS0049163 Camellia sinensis var. sinensis
CSS0049682 Camellia sinensis var. sinensis
DCAR_002881 Daucus carota
DCAR_005743 Daucus carota
DCAR_026994 Daucus carota
DCAR_030455 Daucus carota
Dinv10123 Davidia involucrata
Dinv15141 Davidia involucrata
Dinv44263 Davidia involucrata
Duzib138G1730 Durio zibethinus
Duzib151G0484 Durio zibethinus
Duzib211G0633 Durio zibethinus
Duzib212G0210 Durio zibethinus
ECA233G3364 Erigeron canadensis
ECA236G0385 Erigeron canadensis
ECA246G0838 Erigeron canadensis
ECA247G1084 Erigeron canadensis
EL10Ac3g05537 Beta vulgaris
EL10As5g23572 Beta vulgaris
Eucgr.H04066 Eucalyptus grandis
Eucgr.K03556 Eucalyptus grandis
FAN07G0504 Fragaria x ananassa
FAN12G0129 Fragaria x ananassa
FvH4_4g20190 Fragaria vesca
Glyma.02G010700 Glycine max
Glyma.07G237600 Glycine max
Glyma.09G033800 Glycine max
Glyma.10G011100 Glycine max
Glyma.15G138500 Glycine max
Glyma.17G035900 Glycine max
Gohir.A01G035100 Gossypium hirsutum
Gohir.A08G120000 Gossypium hirsutum
Gohir.A09G241100 Gossypium hirsutum
Gohir.A10G174000 Gossypium hirsutum
Gohir.A11G108100 Gossypium hirsutum
Gohir.D01G023562 Gossypium hirsutum
Gohir.D08G141000 Gossypium hirsutum
Gohir.D09G241900 Gossypium hirsutum
Gorai.002G031000 Gossypium raimondii
Gorai.004G145000 Gossypium raimondii
Gorai.006G265400 Gossypium raimondii
Gorai.007G121100 Gossypium raimondii
GSVIVG01028151001 Vitis vinifera
GSVIVG01031256001 Vitis vinifera
GSVIVG01034962001 Vitis vinifera
HanXRQChr04g0108411 Helianthus annuus
HanXRQChr08g0232271 Helianthus annuus
HanXRQChr10g0310571 Helianthus annuus
HanXRQChr13g0395231 Helianthus annuus
Haze_01332 Corylus avellana
Haze_01337 Corylus avellana
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla
Hma1.2p1_3252F.1_g334510 Hydrangea macrophylla
Hund03138 Selenicereus undatus
Hund11988 Selenicereus undatus
Hund16457 Selenicereus undatus
Lalb_Chr02g0146911 Lupinus albus
Lalb_Chr06g0166981 Lupinus albus
Lalb_Chr07g0181961 Lupinus albus
Lalb_Chr13g0298591 Lupinus albus
Lalb_Chr15g0089131 Lupinus albus
Lalb_Chr18g0058621 Lupinus albus
Lalb_Chr20g0120751 Lupinus albus
Lj1C14T15 Lonicera japonica
Lj3A834G63 Lonicera japonica
Lj4g0016207 Lotus japonicus
Lj5g0021212 Lotus japonicus
Lj6A693T64 Lonicera japonica
Lj6g0019253 Lotus japonicus
Lju926C3T5 Lonicera japonica
Lsat_1_v5_gn_1_40861 Lactuca sativa
Lsat_1_v5_gn_6_116040 Lactuca sativa
Lsat_1_v5_gn_8_88920 Lactuca sativa
Manes.03G206900 Manihot esculenta
Manes.05G013000 Manihot esculenta
Manes.15G001900 Manihot esculenta
MBI18_g35543_MAGBIO Magnolia biondii
MD13G1149900 Malus domestica
MD16G1150300 Malus domestica
Medtr1g086670 Medicago truncatula
Medtr2g033650 Medicago truncatula
Medtr4g122710 Medicago truncatula
MELO3C012929.2 Cucumis melo
MELO3C015909.2 Cucumis melo
MSTRG.5144 Avicennia marina
Nn3g21763 Nelumbo nucifera
Nn4g25534 Nelumbo nucifera
Oeu038954.2 Olea europaea
PGR004G0186 Punica granatum
PGR044G0657 Punica granatum
Phvul.003G116800 Phaseolus vulgaris
Phvul.006G119700 Phaseolus vulgaris
Phvul.007G212700 Phaseolus vulgaris
Potri.002G192700 Populus trichocarpa
Potri.008G102700 Populus trichocarpa
Potri.010G148200 Populus trichocarpa
Potri.014G118000 Populus trichocarpa
Prupe.1G113900 Prunus persica
Psat1g162160 Pisum sativum
Psat4g021760 Pisum sativum
Psat6g160360 Pisum sativum
PSO210G0186 Papaver somniferum
PSO421G0073 Papaver somniferum
PSO724G1196 Papaver somniferum
PSO761G0298 Papaver somniferum
QL06p012814 Quercus lobata
QL12p018988 Quercus lobata
RcHm_v2.0_Chr4g0425851 Rosa chinensis
Rhsim02G0002500 Rhododendron simsii
Rhsim06G0057500 Rhododendron simsii
RhsimUnG0201500 Rhododendron simsii
Sabra02G0163200 Salix brachista
Sabra08G0077600 Salix brachista
Sabra10G0114400 Salix brachista
Sabra14G0087500 Salix brachista
Sc13g0007130 Simmondsia chinensis
Sc17g0000300 Simmondsia chinensis
Sed0003021 Sechium edule
Sed0013714 Sechium edule
Sed0019931 Sechium edule
Sed0022617 Sechium edule
TAR362G0031 Trochodendron aralioides
TAR365G0785 Trochodendron aralioides
TAR636G1196 Trochodendron aralioides
Thecc.01G317400 Theobroma cacao
Thecc.04G304600 Theobroma cacao
TPR.G25427 Trifolium pratense
TPR.G31752 Trifolium pratense
TPR.G33868 Trifolium pratense
TWI09G0962 Tripterygium wilfordii
TWI18G0583 Tripterygium wilfordii
TWI36G1520 Tripterygium wilfordii
TWI73G1001 Tripterygium wilfordii
VMungo0540G1967 Vigna mungo
VMungo0720G2010 Vigna mungo
VMungo1215G2062 Vigna mungo

User provided reference genes

Program Settings