Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28420 Brassica napus
A06p10740 Brassica napus
A09p29580 Brassica napus
Aa31LG9G14730 Aethionema arabicum
Actinidia10349 Actinidia chinensis
Actinidia29599 Actinidia chinensis
Actinidia33120 Actinidia chinensis
Actinidia33121 Actinidia chinensis
AL1G26650 Arabidopsis lyrata
AL6G41440 Arabidopsis lyrata
Aqoxy3G04171 Aquilegia oxysepala
Aqoxy5G03114 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K5H584 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NXYL2L Arachis hypogaea
AT1G14680 Arabidopsis thaliana
AT4G09060 Arabidopsis thaliana
ATR0618G286 Amborella trichopoda
Atru.chr13.1112 Acer truncatum
AUR62018979 Chenopodium quinoa
AUR62027820 Chenopodium quinoa
BcaB01g01380 Brassica carinata
BcaB01g02805 Brassica carinata
BcaB02g06537 Brassica carinata
BcaB02g06538 Brassica carinata
BcaB02g06539 Brassica carinata
BcaB02g06540 Brassica carinata
BcaC01g04732 Brassica carinata
BcaC04g20946 Brassica carinata
BcaC05g25387 Brassica carinata
BolC3t15746H Brassica oleracea
BolC9t56595H Brassica oleracea
BraA03t12047Z Brassica rapa
BraA06t24253Z Brassica rapa
BraA09t38526Z Brassica rapa
C03p34360 Brassica napus
C05p12640 Brassica napus
C09p37650 Brassica napus
CAN.G1173.6 Capsicum annuum
CANSAT25G0959 Cannabis sativa
CARHR015180 Cardamine hirsuta
CARHR260110 Cardamine hirsuta
Carub.0001s1444 Capsella rubella
Carub.0006s2764 Capsella rubella
Ca_16005_v3 Cicer arietinum L.
Ca_16033_v3 Cicer arietinum L.
Cc00_g22270 Coffea canephora
CDE02G0255 Ceratophyllum demersum
CDE05G1426 Ceratophyllum demersum
Cfa017898 Carpinus fangiana
Ciclev10001810m.g Citrus clementina
CiPaw.15G045200 Carya illinoinensis
CiPaw.16G032500 Carya illinoinensis
ClCG08G011330 Citrullus lanatus
ClCG11G014370 Citrullus lanatus
COL.COLO4_11998 Corchorus olitorius
Cpa.g.sc36.188 Carica papaya
Cpa.g.sc36.189 Carica papaya
CsaV3_2G029910 Cucumis sativus L.
CsaV3_3G047770 Cucumis sativus L.
CSS0001361 Camellia sinensis var. sinensis
CSS0014867 Camellia sinensis var. sinensis
CSS0029872 Camellia sinensis var. sinensis
DCAR_005285 Daucus carota
Dinv07080 Davidia involucrata
Duzib041G0396 Durio zibethinus
Duzib093G2197 Durio zibethinus
Duzib114G0708 Durio zibethinus
Duzib116G0740 Durio zibethinus
ECA246G0538 Erigeron canadensis
ECA246G1511 Erigeron canadensis
ECA247G2086 Erigeron canadensis
EL10Ac1g01138 Beta vulgaris
EL10Ac4g09478 Beta vulgaris
Eucgr.F00380 Eucalyptus grandis
FAN04G1986 Fragaria x ananassa
FAN13G1833 Fragaria x ananassa
FAN18G3842 Fragaria x ananassa
FvH4_5g36300 Fragaria vesca
Glyma.02G209600 Glycine max
Glyma.04G098500 Glycine max
Glyma.06G100100 Glycine max
Glyma.14G177700 Glycine max
Gohir.A05G223200 Gossypium hirsutum
Gohir.A06G032900 Gossypium hirsutum
Gohir.D05G225900 Gossypium hirsutum
Gohir.D06G033800 Gossypium hirsutum
Gorai.009G233400 Gossypium raimondii
Gorai.010G037300 Gossypium raimondii
GSVIVG01009092001 Vitis vinifera
HanXRQChr05g0163201 Helianthus annuus
HanXRQChr10g0278171 Helianthus annuus
HanXRQChr17g0556331 Helianthus annuus
Haze_18252 Corylus avellana
Haze_21792 Corylus avellana
Hma1.2p1_0526F.1_g172800 Hydrangea macrophylla
Hma1.2p1_0526F.1_g172810 Hydrangea macrophylla
Hma1.2p1_1180F.1_g264680 Hydrangea macrophylla
Hma1.2p1_1568F.1_g291110 Hydrangea macrophylla
HPP92_025845 Vanilla planifolia
Hund16884 Selenicereus undatus
Hund26994 Selenicereus undatus
Lalb_Chr04g0253021 Lupinus albus
Lalb_Chr11g0065241 Lupinus albus
Lj1g0011682 Lotus japonicus
Lj4C96G4 Lonicera japonica
Lsat_1_v5_gn_1_3000 Lactuca sativa
Lsat_1_v5_gn_6_105560 Lactuca sativa
Manes.18G063100 Manihot esculenta
MBI03_g38469_MAGBIO Magnolia biondii
MBI03_g47917_MAGBIO Magnolia biondii
MBI06_g34539_MAGBIO Magnolia biondii
MBI06_g46882_MAGBIO Magnolia biondii
MBI06_g47948_MAGBIO Magnolia biondii
MBI07_g39811_MAGBIO Magnolia biondii
MBI07_g40370_MAGBIO Magnolia biondii
MBI12_g20562_MAGBIO Magnolia biondii
MD08G1189700 Malus domestica
MD08G1190000 Malus domestica
MD08G1190200 Malus domestica
MD15G1377500 Malus domestica
Medtr3g099600 Medicago truncatula
Medtr8g009760 Medicago truncatula
MELO3C003545.2 Cucumis melo
MELO3C030322.2 Cucumis melo
Migut.N02874 Erythranthe guttata
MSTRG.22171 Avicennia marina
MSTRG.24439 Avicennia marina
Nitab4.5_0003374g0030 Nicotiana tabacum
Nitab4.5_0009374g0030 Nicotiana tabacum
Nn4g24800 Nelumbo nucifera
Oeu024817.1 Olea europaea
Oeu029729.1 Olea europaea
Oeu029730.1 Olea europaea
Os02g0831400 Oryza sativa ssp. japonica
Peaxi162Scf00139g00014 Petunia axillaris
PGR031G0663 Punica granatum
PGR031G2053 Punica granatum
PGSC0003DMG400030841 Solanum tuberosum
Phvul.008G177200 Phaseolus vulgaris
Phvul.009G033700 Phaseolus vulgaris
Potri.002G101400 Populus trichocarpa
Prupe.1G524200 Prunus persica
Psat2g069400 Pisum sativum
Psat5g050280 Pisum sativum
PSO063G2842 Papaver somniferum
PSO782G1937 Papaver somniferum
QL02p002269 Quercus lobata
RcHm_v2.0_Chr3g0481851 Rosa chinensis
RcHm_v2.0_Chr3g0481861 Rosa chinensis
RcHm_v2.0_Chr5g0040961 Rosa chinensis
RcHm_v2.0_Chr5g0044491 Rosa chinensis
RcHm_v2.0_Chr5g0044811 Rosa chinensis
RcHm_v2.0_Chr5g0045611 Rosa chinensis
RcHm_v2.0_Chr5g0045621 Rosa chinensis
RcHm_v2.0_Chr5g0049341 Rosa chinensis
RcHm_v2.0_Chr5g0049351 Rosa chinensis
RcHm_v2.0_Chr7g0238301 Rosa chinensis
RcHm_v2.0_Chr7g0238321 Rosa chinensis
Rhsim06G0077200 Rhododendron simsii
Sabra02G0079500 Salix brachista
SalBow2G0015 Salvia bowleyana
SalBow2G2952 Salvia bowleyana
Sc23g0000420 Simmondsia chinensis
Sed0001081 Sechium edule
Sed0003858 Sechium edule
SGA_v2.0_scaffold4G02188 Striga asiatica
Solyc04g074760.3 Solanum lycopersicum
Sopen04g029730 Solanum pennellii
Sp1g13060 Schrenkiella parvula
Sp6g08460 Schrenkiella parvula
THA.LOC104816564 Tarenaya hassleriana
Thecc.08G101000 Theobroma cacao
Thhalv10008342m.g Eutrema salsugineum
Thhalv10028816m.g Eutrema salsugineum
TPR.G12497 Trifolium pratense
TPR.G6353 Trifolium pratense
TWI12G0071 Tripterygium wilfordii
TWI56G1284 Tripterygium wilfordii
unitig_578.g16186 Utricularia gibba
unitig_8.g4846 Utricularia gibba
vmacro11166 Vaccinium macrocarpon
VMungo0647G1227 Vigna mungo
VMungo1309G1468 Vigna mungo
Zm00001eb259540 Zea mays

User provided reference genes

Program Settings