Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p25040 Brassica napus
A05p13290 Brassica napus
Aa31LG5G4740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis
Actinidia03601 Actinidia chinensis
Actinidia10811 Actinidia chinensis
Actinidia10812 Actinidia chinensis
Ah.06g182530 Amaranthus hybridus
AL4G27990 Arabidopsis lyrata
Aqoxy1G03453 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NU3MCC Arachis hypogaea
AT2G32590 Arabidopsis thaliana
ATR0317G123 Amborella trichopoda
ATR0772G025 Amborella trichopoda
Atru.chr2.3500 Acer truncatum
Atru.chr6.3228 Acer truncatum
AUR62015832 Chenopodium quinoa
AUR62015833 Chenopodium quinoa
AUR62020385 Chenopodium quinoa
AUR62020387 Chenopodium quinoa
BcaB02g10460 Brassica carinata
BcaB06g28605 Brassica carinata
BcaB06g28606 Brassica carinata
BcaC02g07908 Brassica carinata
BolC4t23260H Brassica oleracea
BolC4t27689H Brassica oleracea
BraA04t18015Z Brassica rapa
BraA05t20270Z Brassica rapa
C04p17080 Brassica napus
C04p62090 Brassica napus
C04p62100 Brassica napus
CAN.G290.10 Capsicum annuum
CAN.G574.39 Capsicum annuum
CAN.G574.40 Capsicum annuum
CANSAT64G0165 Cannabis sativa
CARHR126440 Cardamine hirsuta
Carub.0004s1392 Capsella rubella
Ca_01616_v3 Cicer arietinum L.
Ca_19493_v3 Cicer arietinum L.
CBR_g26183 Chara braunii
Cc05_g03670 Coffea canephora
CDE09G1127 Ceratophyllum demersum
Cfa020301 Carpinus fangiana
Cfa026695 Carpinus fangiana
Ciclev10007620m.g Citrus clementina
Ciclev10014542m.g Citrus clementina
CiPaw.03G157800 Carya illinoinensis
CiPaw.11G193000 Carya illinoinensis
ClCG02G009060 Citrullus lanatus
COL.COLO4_09704 Corchorus olitorius
Cpa.g.sc87.104 Carica papaya
Cre13.g589300 Chlamydomonas reinhardtii
CsaV3_2G034670 Cucumis sativus L.
CSS0013476 Camellia sinensis var. sinensis
DCAR_019753 Daucus carota
DCAR_021155 Daucus carota
Dinv01749 Davidia involucrata
Dinv08745 Davidia involucrata
Dinv17119 Davidia involucrata
Dinv18681 Davidia involucrata
Dinv22243 Davidia involucrata
Dinv39731 Davidia involucrata
Duzib138G0684 Durio zibethinus
Duzib211G0477 Durio zibethinus
ECA236G1051 Erigeron canadensis
ECA240G1119 Erigeron canadensis
EL10Ac4g07751 Beta vulgaris
Eucgr.A01107 Eucalyptus grandis
FAN02G0990 Fragaria x ananassa
FAN05G1959 Fragaria x ananassa
FAN09G0430 Fragaria x ananassa
FAN11G2344 Fragaria x ananassa
FAN14G5114 Fragaria x ananassa
FAN16G1928 Fragaria x ananassa
FAN21G2044 Fragaria x ananassa
FAN25G2100 Fragaria x ananassa
FAN25G2879 Fragaria x ananassa
FvH4_3g23280 Fragaria vesca
FvH4_6g42730 Fragaria vesca
Glyma.06G308100 Glycine max
Glyma.12G096700 Glycine max
Glyma.12G191300 Glycine max
Glyma.13G310451 Glycine max
Gohir.A07G081900 Gossypium hirsutum
Gohir.A07G186000 Gossypium hirsutum
Gohir.D07G088400 Gossypium hirsutum
Gorai.001G094600 Gossypium raimondii
GSVIVG01030475001 Vitis vinifera
GSVIVG01037701001 Vitis vinifera
HanXRQChr04g0126971 Helianthus annuus
Haze_09719 Corylus avellana
Haze_12800 Corylus avellana
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla
HPP92_023149 Vanilla planifolia
Hund02022 Selenicereus undatus
Hund02023 Selenicereus undatus
Hund02025 Selenicereus undatus
Lalb_Chr03g0028581 Lupinus albus
Lalb_Chr19g0136061 Lupinus albus
Lalb_Chr19g0136071 Lupinus albus
Lj3g0007999 Lotus japonicus
Lj8A127T48 Lonicera japonica
Lj8A127T49 Lonicera japonica
Lj8A171G43 Lonicera japonica
Lj8A171G44 Lonicera japonica
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus
Lsat_1_v5_gn_7_93200 Lactuca sativa
Lsat_1_v5_gn_9_106740 Lactuca sativa
Manes.04G099700 Manihot esculenta
Mapoly0002s0133 Marchantia polymorpha
MBI07_g01730_MAGBIO Magnolia biondii
MCO04G245 Micromonas commoda
MD03G1195600 Malus domestica
MD03G1195700 Malus domestica
MD09G1071300 Malus domestica
MD11G1212100 Malus domestica
MD17G1101000 Malus domestica
MD17G1101200 Malus domestica
MD17G1101300 Malus domestica
Medtr2g087880 Medicago truncatula
Medtr4g050060 Medicago truncatula
MELO3C019300.2 Cucumis melo
Migut.M00432 Erythranthe guttata
MSTRG.14857 Avicennia marina
Nitab4.5_0000130g0240 Nicotiana tabacum
Nitab4.5_0015742g0010 Nicotiana tabacum
Nn1g03443 Nelumbo nucifera
Oeu027232.1 Olea europaea
Oeu036739.1 Olea europaea
Os01g0532800 Oryza sativa ssp. japonica
Peaxi162Scf00007g00129 Petunia axillaris
PGR042G1566 Punica granatum
PGSC0003DMG400001077 Solanum tuberosum
Phvul.005G116900 Phaseolus vulgaris
Phvul.011G101300 Phaseolus vulgaris
Potri.014G155900 Populus trichocarpa
Pp3c11_22430 Physcomitrium patens
Pp3c7_4280 Physcomitrium patens
PRCOL_00002032 Prasinoderma coloniale
Prupe.3G213700 Prunus persica
Prupe.4G220400 Prunus persica
Psat5g261240 Pisum sativum
Psat7g203760 Pisum sativum
PSO210G5093 Papaver somniferum
QL08p006881 Quercus lobata
QL08p031532 Quercus lobata
RcHm_v2.0_Chr2g0158621 Rosa chinensis
RcHm_v2.0_Chr5g0041001 Rosa chinensis
Rhsim04G0052200 Rhododendron simsii
Rhsim07G0255900 Rhododendron simsii
Sabra14G0117900 Salix brachista
SalBow7G1078 Salvia bowleyana
Sc12g0002210 Simmondsia chinensis
Sed0010458 Sechium edule
Sed0022442 Sechium edule
SEGI_15855 Sequoiadendron giganteum
SEGI_30766 Sequoiadendron giganteum
SEGI_37895 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23393 Striga asiatica
SHI10368 Sapria himalayana
SHI10371 Sapria himalayana
Solyc07g049680.4 Solanum lycopersicum
Sopen07g025100 Solanum pennellii
Sp4g14920 Schrenkiella parvula
TAR624G0007 Trochodendron aralioides
TAR626G1388 Trochodendron aralioides
THA.LOC104816038 Tarenaya hassleriana
THA.LOC104826143 Tarenaya hassleriana
Thecc.01G178100 Theobroma cacao
Thecc.07G031000 Theobroma cacao
Thhalv10016359m.g Eutrema salsugineum
TPR.G35222 Trifolium pratense
TPR.G4243 Trifolium pratense
TPR.G4630 Trifolium pratense
TWI36G1355 Tripterygium wilfordii
TWI75G0495 Tripterygium wilfordii
unitig_60.g25819 Utricularia gibba
vmacro09345 Vaccinium macrocarpon
VMungo1080G0849 Vigna mungo
VMungo1127G0496 Vigna mungo
Zm00001eb162990 Zea mays

User provided reference genes

Program Settings