Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p02830 Brassica napus
A05p02750 Brassica napus
A09p50780 Brassica napus
A10p29590 Brassica napus
Aa31LG10G12650 Aethionema arabicum
Aa31sc24G60 Aethionema arabicum
Actinidia22024 Actinidia chinensis
Actinidia38577 Actinidia chinensis
Actinidia40438 Actinidia chinensis
Ah.04g152400 Amaranthus hybridus
Ah.13g075990 Amaranthus hybridus
AL4G40540 Arabidopsis lyrata
AL5G39600 Arabidopsis lyrata
AL6G16900 Arabidopsis lyrata
Aqoxy2G00073 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6W7ZDH Arachis hypogaea
AT2G42180 Arabidopsis thaliana
AT3G57950 Arabidopsis thaliana
AT5G06790 Arabidopsis thaliana
ATR0605G366 Amborella trichopoda
Atru.chr8.1077 Acer truncatum
AUR62012046 Chenopodium quinoa
AUR62024314 Chenopodium quinoa
BcaB02g08285 Brassica carinata
BcaB02g08287 Brassica carinata
BcaC02g09973 Brassica carinata
BcaC02g09974 Brassica carinata
BcaC02g12466 Brassica carinata
BcaC06g32394 Brassica carinata
BcaC06g32542 Brassica carinata
BcaC07g40166 Brassica carinata
BcaNung04405 Brassica carinata
BolC4t21971H Brassica oleracea
BolC4t25006H Brassica oleracea
BolC8t50948H Brassica oleracea
BolC9t59739H Brassica oleracea
BraA04t16007Z Brassica rapa
BraA05t19267Z Brassica rapa
BraA09t40525Z Brassica rapa
BraA10t45001Z Brassica rapa
C04p03340 Brassica napus
C04p34420 Brassica napus
C04p34430 Brassica napus
C08p33500 Brassica napus
C09p69970 Brassica napus
CAN.G515.11 Capsicum annuum
CANSAT64G0621 Cannabis sativa
CARHR168260 Cardamine hirsuta
CARHR206390 Cardamine hirsuta
Carub.0004s2450 Capsella rubella
Carub.0004s2452 Capsella rubella
Carub.0005s2479 Capsella rubella
Carub.0006s0568 Capsella rubella
Ca_08513_v3 Cicer arietinum L.
Ca_25700_v3 Cicer arietinum L.
Cc06_g16110 Coffea canephora
CDE02G1004 Ceratophyllum demersum
CDE05G1581 Ceratophyllum demersum
Cfa020181 Carpinus fangiana
Ciclev10012846m.g Citrus clementina
CiPaw.09G031500 Carya illinoinensis
CiPaw.10G027200 Carya illinoinensis
ClCG09G019210 Citrullus lanatus
ClCG10G017430 Citrullus lanatus
COL.COLO4_36150 Corchorus olitorius
Cpa.g.c33371 Carica papaya
CsaV3_3G038930 Cucumis sativus L.
CsaV3_5G027200 Cucumis sativus L.
CSS0005195 Camellia sinensis var. sinensis
DCAR_013556 Daucus carota
DCAR_017016 Daucus carota
DCAR_017017 Daucus carota
DCAR_019841 Daucus carota
Duzib093G1286 Durio zibethinus
Duzib106G1084 Durio zibethinus
ECA236G4442 Erigeron canadensis
ECA247G0725 Erigeron canadensis
ECA248G0990 Erigeron canadensis
EL10Ac3g06932 Beta vulgaris
Eucgr.A02445 Eucalyptus grandis
Eucgr.K01832 Eucalyptus grandis
FAN02G0416 Fragaria x ananassa
FAN05G5107 Fragaria x ananassa
FAN09G0581 Fragaria x ananassa
FAN14G3432 Fragaria x ananassa
FAN14G3905 Fragaria x ananassa
FvH4_6g22530 Fragaria vesca
Glyma.02G178400 Glycine max
Glyma.03G143800 Glycine max
Glyma.09G112700 Glycine max
Glyma.19G146900 Glycine max
Gohir.A01G192300 Gossypium hirsutum
Gohir.A04G052101 Gossypium hirsutum
Gohir.A09G127300 Gossypium hirsutum
Gohir.D01G177600 Gossypium hirsutum
Gohir.D04G098100 Gossypium hirsutum
Gohir.D09G123500 Gossypium hirsutum
Gorai.002G225600 Gossypium raimondii
Gorai.006G067100 Gossypium raimondii
Gorai.006G142100 Gossypium raimondii
HanXRQChr10g0300741 Helianthus annuus
HanXRQChr13g0389341 Helianthus annuus
Haze_19973 Corylus avellana
Hma1.2p1_0183F.1_g080800 Hydrangea macrophylla
Lalb_Chr07g0188981 Lupinus albus
Lalb_Chr15g0078951 Lupinus albus
Lalb_Chr18g0047801 Lupinus albus
Lj1g0027593 Lotus japonicus
Lj2P370T14 Lonicera japonica
Lj5g0003065 Lotus japonicus
Lju124C28G5 Lonicera japonica
Lsat_1_v5_gn_8_74300 Lactuca sativa
Lsat_1_v5_gn_9_26721 Lactuca sativa
Manes.08G045500 Manihot esculenta
Manes.09G033600 Manihot esculenta
MBI01_g36100_MAGBIO Magnolia biondii
MD12G1058500 Malus domestica
MD14G1059200 Malus domestica
Medtr1g053900 Medicago truncatula
Medtr7g093040 Medicago truncatula
MELO3C009637.2 Cucumis melo
MELO3C021570.2 Cucumis melo
Migut.J01826 Erythranthe guttata
Migut.K00046 Erythranthe guttata
MSTRG.10837 Avicennia marina
MSTRG.19899 Avicennia marina
MSTRG.6472 Avicennia marina
Nitab4.5_0000016g0390 Nicotiana tabacum
Nitab4.5_0002035g0010 Nicotiana tabacum
Oeu007772.1 Olea europaea
Oeu035192.1 Olea europaea
Os04g0665666 Oryza sativa ssp. japonica
Os09g0279200 Oryza sativa ssp. japonica
Peaxi162Scf00258g00023 Petunia axillaris
PGR004G2865 Punica granatum
PGR142G3046 Punica granatum
PGSC0003DMG400009700 Solanum tuberosum
Phvul.001G141500 Phaseolus vulgaris
Phvul.007G258900 Phaseolus vulgaris
Potri.006G191100 Populus trichocarpa
Potri.016G047800 Populus trichocarpa
Prupe.7G075500 Prunus persica
Psat3g069120 Pisum sativum
Psat6g128520 Pisum sativum
PSO017G5564 Papaver somniferum
PSO063G6729 Papaver somniferum
PSO339G4803 Papaver somniferum
PSO675G1999 Papaver somniferum
QL07p023397 Quercus lobata
RcHm_v2.0_Chr3g0479981 Rosa chinensis
Rhsim03G0008400 Rhododendron simsii
Sabra06G0146400 Salix brachista
Sabra16G0051300 Salix brachista
SalBow1G5050 Salvia bowleyana
SalBow1G5631 Salvia bowleyana
SalBow6G1024 Salvia bowleyana
SalBow6G3273 Salvia bowleyana
Sc13g0002220 Simmondsia chinensis
Sc19g0006980 Simmondsia chinensis
Sc25g0005120 Simmondsia chinensis
Sed0013585 Sechium edule
Sed0017921 Sechium edule
SEGI_01918 Sequoiadendron giganteum
SGA_v2.0_scaffold4546G54500 Striga asiatica
SGA_v2.0_scaffold94G28431 Striga asiatica
SHI16104 Sapria himalayana
Solyc03g063550.1 Solanum lycopersicum
Sopen03g016210 Solanum pennellii
Sp4g24360 Schrenkiella parvula
Sp5g04770 Schrenkiella parvula
Sp6g36065 Schrenkiella parvula
TAR369G1018 Trochodendron aralioides
THA.LOC104802486 Tarenaya hassleriana
THA.LOC104824607 Tarenaya hassleriana
THA.LOC104826767 Tarenaya hassleriana
Thecc.05G169900 Theobroma cacao
Thhalv10006259m.g Eutrema salsugineum
Thhalv10014619m.g Eutrema salsugineum
TPR.G18214 Trifolium pratense
TPR.G27747 Trifolium pratense
TWI53G0257 Tripterygium wilfordii
TWI74G0378 Tripterygium wilfordii
VMungo0720G2172 Vigna mungo
VMungo1383G3663 Vigna mungo
Zm00001eb067170 Zea mays

User provided reference genes

Program Settings