Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p20870 Brassica napus
Aa31LG4G15550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1234 Anthoceros agrestis
Actinidia08683 Actinidia chinensis
Actinidia23942 Actinidia chinensis
Actinidia37205 Actinidia chinensis
Ah.08g219490 Amaranthus hybridus
Ah.15g097240 Amaranthus hybridus
AL5G25410 Arabidopsis lyrata
Aqoxy4G02917 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.42PK2U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.60SBBK Arachis hypogaea
AT3G46550 Arabidopsis thaliana
ATR0559G275 Amborella trichopoda
ATR0665G173 Amborella trichopoda
Atru.chr3.3897 Acer truncatum
AUR62001791 Chenopodium quinoa
AUR62009579 Chenopodium quinoa
BcaB01g01009 Brassica carinata
BcaC01g01907 Brassica carinata
BolC3t19345H Brassica oleracea
BraA06t25168Z Brassica rapa
C03p70730 Brassica napus
CAN.G1305.32 Capsicum annuum
CAN.G394.55 Capsicum annuum
CAN.G93.8 Capsicum annuum
CANSAT21G2213 Cannabis sativa
CARHR155250 Cardamine hirsuta
Carub.0005s1282 Capsella rubella
Ca_02403_v3 Cicer arietinum L.
Cc01_g12820 Coffea canephora
CDE04G3587 Ceratophyllum demersum
CDE07G0122 Ceratophyllum demersum
Cfa011497 Carpinus fangiana
Ciclev10028444m.g Citrus clementina
CiPaw.13G094900 Carya illinoinensis
CiPaw.14G068600 Carya illinoinensis
ClCG03G001570 Citrullus lanatus
COL.COLO4_18502 Corchorus olitorius
Cpa.g.sc1351.1 Carica papaya
CsaV3_1G034110 Cucumis sativus L.
CSS0007929 Camellia sinensis var. sinensis
CSS0046782 Camellia sinensis var. sinensis
DCAR_005327 Daucus carota
DCAR_015624 Daucus carota
Dinv12419 Davidia involucrata
Dinv16996 Davidia involucrata
Dinv42945 Davidia involucrata
Dinv43155 Davidia involucrata
Duzib168G2354 Durio zibethinus
Duzib170G0065 Durio zibethinus
ECA236G3501 Erigeron canadensis
EL10Ac7g16014 Beta vulgaris
Eucgr.B02370 Eucalyptus grandis
FAN11G0300 Fragaria x ananassa
FAN16G3196 Fragaria x ananassa
FAN21G1353 Fragaria x ananassa
FAN25G0853 Fragaria x ananassa
FvH4_3g36000 Fragaria vesca
Glyma.03G129200 Glycine max
Glyma.09G048100 Glycine max
Glyma.15G155400 Glycine max
Gohir.A07G098300 Gossypium hirsutum
Gohir.D03G125900 Gossypium hirsutum
Gohir.D07G102600 Gossypium hirsutum
Gorai.001G110500 Gossypium raimondii
Gorai.003G132100 Gossypium raimondii
GSVIVG01024973001 Vitis vinifera
HanXRQChr05g0134901 Helianthus annuus
HanXRQChr11g0350861 Helianthus annuus
Haze_24091 Corylus avellana
Hma1.2p1_0418F.1_g149060 Hydrangea macrophylla
Lalb_Chr15g0083661 Lupinus albus
Lalb_Chr18g0051921 Lupinus albus
Lalb_Chr18g0051931 Lupinus albus
Lalb_Chr20g0114361 Lupinus albus
Lj1P154T18 Lonicera japonica
Lj2A1062T47 Lonicera japonica
Lj6g0012231 Lotus japonicus
Lsat_1_v5_gn_8_73140 Lactuca sativa
Lsat_1_v5_gn_9_23341 Lactuca sativa
Manes.04G034700 Manihot esculenta
Manes.11G130800 Manihot esculenta
Mapoly0012s0106 Marchantia polymorpha
Mapoly0027s0079 Marchantia polymorpha
Mapoly0027s0080 Marchantia polymorpha
Mapoly0027s0081 Marchantia polymorpha
Mapoly0027s0083 Marchantia polymorpha
Mapoly0027s0084 Marchantia polymorpha
Mapoly0027s0087 Marchantia polymorpha
Mapoly0070s0054 Marchantia polymorpha
Mapoly0093s0009 Marchantia polymorpha
Mapoly0194s0008 Marchantia polymorpha
MBI05_g22049_MAGBIO Magnolia biondii
MD11G1109900 Malus domestica
Medtr2g018340 Medicago truncatula
Medtr2g018380 Medicago truncatula
Medtr2g437700 Medicago truncatula
MELO3C020643.2 Cucumis melo
Migut.D02106 Erythranthe guttata
Migut.N02676 Erythranthe guttata
MSTRG.12648 Avicennia marina
MSTRG.18582 Avicennia marina
MSTRG.21200 Avicennia marina
Nitab4.5_0000514g0120 Nicotiana tabacum
Nitab4.5_0002403g0050 Nicotiana tabacum
Nitab4.5_0003753g0010 Nicotiana tabacum
Nitab4.5_0006166g0020 Nicotiana tabacum
Nn2g10372 Nelumbo nucifera
Nn2g15189 Nelumbo nucifera
Nn3g19645 Nelumbo nucifera
Nn4g22602 Nelumbo nucifera
Nn5g26920 Nelumbo nucifera
Nn5g30776 Nelumbo nucifera
Oeu019197.1 Olea europaea
Oeu054146.1 Olea europaea
Os01g0841100 Oryza sativa ssp. japonica
Os05g0459700 Oryza sativa ssp. japonica
Peaxi162Scf00089g01810 Petunia axillaris
Peaxi162Scf00774g00007 Petunia axillaris
PGR102G2795 Punica granatum
PGSC0003DMG400018093 Solanum tuberosum
PGSC0003DMG400030411 Solanum tuberosum
Phvul.009G244800 Phaseolus vulgaris
Potri.006G174900 Populus trichocarpa
Potri.018G097000 Populus trichocarpa
Pp3c26_5590 Physcomitrium patens
Pp3c7_430 Physcomitrium patens
Prupe.6G078300 Prunus persica
Psat1g151360 Pisum sativum
PSO339G2986 Papaver somniferum
PSO384G2134 Papaver somniferum
QL01p032133 Quercus lobata
RcHm_v2.0_Chr5g0064411 Rosa chinensis
Rhsim01G0227300 Rhododendron simsii
Sabra18G0084200 Salix brachista
SalBow2G2620 Salvia bowleyana
SalBow3G2904 Salvia bowleyana
Sc21g0005760 Simmondsia chinensis
Sed0018795 Sechium edule
SEGI_34657 Sequoiadendron giganteum
SEGI_38266 Sequoiadendron giganteum
SGA_v2.0_scaffold203G41509 Striga asiatica
SGA_v2.0_scaffold61G21286 Striga asiatica
SHI05949 Sapria himalayana
SMO234G0076 Selaginella moellendorffii
SMO236G0071 Selaginella moellendorffii
Solyc03g112880.1 Solanum lycopersicum
Solyc06g076120.2 Solanum lycopersicum
Sopen03g031960 Solanum pennellii
Sopen06g032520 Solanum pennellii
Sp5g15140 Schrenkiella parvula
TAR623G0371 Trochodendron aralioides
TAR625G0646 Trochodendron aralioides
TAR633G2704 Trochodendron aralioides
THA.LOC104799443 Tarenaya hassleriana
THA.LOC104810781 Tarenaya hassleriana
THA.LOC104815792 Tarenaya hassleriana
Thecc.09G322200 Theobroma cacao
Thhalv10002543m.g Eutrema salsugineum
TPR.G15642 Trifolium pratense
TPR.G18416 Trifolium pratense
TPR.G20777 Trifolium pratense
TPR.G22191 Trifolium pratense
TPR.G22197 Trifolium pratense
TPR.G25146 Trifolium pratense
TPR.G30924 Trifolium pratense
TPR.G30927 Trifolium pratense
TPR.G30928 Trifolium pratense
TPR.G39366 Trifolium pratense
TPR.G39714 Trifolium pratense
TPR.G40127 Trifolium pratense
TPR.G690 Trifolium pratense
TPR.G7674 Trifolium pratense
TWI31G1202 Tripterygium wilfordii
TWI75G0139 Tripterygium wilfordii
TWI79G0909 Tripterygium wilfordii
unitig_736.g22965 Utricularia gibba
unitig_90.g27565 Utricularia gibba
VMungo0251G1681 Vigna mungo
VMungo0464G1337 Vigna mungo
VMungo1309G0153 Vigna mungo
Zm00001eb148360 Zea mays
Zm00001eb289670 Zea mays
Zm00001eb367960 Zea mays

User provided reference genes

Program Settings