Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p23100 Brassica napus
A09p57530 Brassica napus
Aa31LG6G15090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.132 Anthoceros agrestis
Actinidia06528 Actinidia chinensis
Actinidia30842 Actinidia chinensis
Ah.03g141840 Amaranthus hybridus
Ah.10g031520 Amaranthus hybridus
AL4G12000 Arabidopsis lyrata
Aqoxy3G03364 Aquilegia oxysepala
Aqoxy5G01329 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1WNY7F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AC1ID1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJHX2R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VE9EQN Arachis hypogaea
AT2G22480 Arabidopsis thaliana
ATR0564G424 Amborella trichopoda
Atru.chr3.1298 Acer truncatum
AUR62003284 Chenopodium quinoa
AUR62027181 Chenopodium quinoa
AUR62034395 Chenopodium quinoa
AUR62039818 Chenopodium quinoa
AUR62044125 Chenopodium quinoa
AUR62044190 Chenopodium quinoa
BcaB03g12303 Brassica carinata
BcaB03g12304 Brassica carinata
BcaB03g12305 Brassica carinata
BcaB07g33475 Brassica carinata
BcaB08g35073 Brassica carinata
BcaC01g00345 Brassica carinata
BcaC07g41065 Brassica carinata
BolC3t20118H Brassica oleracea
BolC8t51631H Brassica oleracea
BraA01t01464Z Brassica rapa
BraA08t34269Z Brassica rapa
BraA09t41144Z Brassica rapa
C03p78730 Brassica napus
C08p40650 Brassica napus
CAN.G1388.6 Capsicum annuum
CAN.G525.43 Capsicum annuum
CANSAT01G2559 Cannabis sativa
CARHR113680 Cardamine hirsuta
Carub.0004s0164 Capsella rubella
Ca_04541_v3 Cicer arietinum L.
Ca_25399_v3 Cicer arietinum L.
Cc07_g14330 Coffea canephora
CDE02G3788 Ceratophyllum demersum
CDE09G1266 Ceratophyllum demersum
Cfa004357 Carpinus fangiana
Ciclev10025337m.g Citrus clementina
CiPaw.01G047300 Carya illinoinensis
CiPaw.02G021600 Carya illinoinensis
ClCG10G008720 Citrullus lanatus
COL.COLO4_27338 Corchorus olitorius
Cpa.g.sc55.34 Carica papaya
Cre06.g262900 Chlamydomonas reinhardtii
Cre12.g553250 Chlamydomonas reinhardtii
CsaV3_4G008960 Cucumis sativus L.
CSS0028623 Camellia sinensis var. sinensis
CSS0033468 Camellia sinensis var. sinensis
DCAR_003452 Daucus carota
Dinv13625 Davidia involucrata
Dinv33753 Davidia involucrata
Duzib147G1393 Durio zibethinus
ECA246G4420 Erigeron canadensis
EL10Ac2g02972 Beta vulgaris
EL10Ac6g14793 Beta vulgaris
Eucgr.I00555 Eucalyptus grandis
FAN19G1203 Fragaria x ananassa
FAN23G0052 Fragaria x ananassa
FAN26G1057 Fragaria x ananassa
FAN28G1634 Fragaria x ananassa
FvH4_1g19980 Fragaria vesca
Glyma.01G024800 Glycine max
Glyma.08G280700 Glycine max
Glyma.18G145500 Glycine max
Gohir.A02G130900 Gossypium hirsutum
Gohir.D03G042200 Gossypium hirsutum
Gorai.003G042800 Gossypium raimondii
GSVIVG01003611001 Vitis vinifera
GSVIVG01003613001 Vitis vinifera
GSVIVG01011393001 Vitis vinifera
HanXRQChr16g0518061 Helianthus annuus
Haze_06115 Corylus avellana
Haze_15051 Corylus avellana
Hma1.2p1_0045F.1_g026420 Hydrangea macrophylla
HPP92_005774 Vanilla planifolia
HPP92_005817 Vanilla planifolia
HPP92_005824 Vanilla planifolia
Hund13219 Selenicereus undatus
Hund16545 Selenicereus undatus
Lalb_Chr05g0216491 Lupinus albus
Lalb_Chr16g0392161 Lupinus albus
Lj2C537G2 Lonicera japonica
Lj2g0019493 Lotus japonicus
Lj4C271G9 Lonicera japonica
Lj4g0017425 Lotus japonicus
Lj7C395T20 Lonicera japonica
Lju188C0T0 Lonicera japonica
Lsat_1_v5_gn_2_70500 Lactuca sativa
Lsat_1_v5_gn_5_44641 Lactuca sativa
Manes.12G128200 Manihot esculenta
Manes.13G098500 Manihot esculenta
Mapoly0002s0097 Marchantia polymorpha
Mapoly0093s0072 Marchantia polymorpha
MBI02_g18286_MAGBIO Magnolia biondii
MBI02_g39063_MAGBIO Magnolia biondii
MBI05_g08279_MAGBIO Magnolia biondii
MCO12G154 Micromonas commoda
MCO13G312 Micromonas commoda
MD01G1037400 Malus domestica
MD15G1315500 Malus domestica
Medtr5g032570 Medicago truncatula
Medtr8g069040 Medicago truncatula
MELO3C018966.2 Cucumis melo
Migut.H02313 Erythranthe guttata
Migut.K00774 Erythranthe guttata
MSTRG.23367 Avicennia marina
Nitab4.5_0000902g0100 Nicotiana tabacum
Nitab4.5_0001122g0150 Nicotiana tabacum
Nn3g17222 Nelumbo nucifera
Nn4g23143 Nelumbo nucifera
Nn5g29937 Nelumbo nucifera
Oeu000867.2 Olea europaea
Oeu055136.2 Olea europaea
Os08g0439000 Oryza sativa ssp. japonica
Os09g0415800 Oryza sativa ssp. japonica
Os10g0405600 Oryza sativa ssp. japonica
Peaxi162Scf00569g00013 Petunia axillaris
PGR043G0003 Punica granatum
PGR083G2333 Punica granatum
PGSC0003DMG400016208 Solanum tuberosum
PGSC0003DMG402023631 Solanum tuberosum
Phvul.002G148700 Phaseolus vulgaris
Phvul.003G289600 Phaseolus vulgaris
Potri.007G010300 Populus trichocarpa
Pp3c11_4880 Physcomitrium patens
Pp3c20_13380 Physcomitrium patens
Pp3c8_15610 Physcomitrium patens
Pp3c9_4650 Physcomitrium patens
Prupe.6G196200 Prunus persica
Psat2g081160 Pisum sativum
Psat4g116320 Pisum sativum
PSO017G3545 Papaver somniferum
PSO063G0723 Papaver somniferum
PSO478G2145 Papaver somniferum
PSO675G4062 Papaver somniferum
PSO832G3237 Papaver somniferum
QL06p047549 Quercus lobata
RcHm_v2.0_Chr2g0111921 Rosa chinensis
Rhsim08G0014700 Rhododendron simsii
Rhsim10G0171500 Rhododendron simsii
Sabra07G0007800 Salix brachista
Sc03g0000280 Simmondsia chinensis
Sc10g0003660 Simmondsia chinensis
Sed0015495 Sechium edule
SGA_v2.0_scaffold195G40835 Striga asiatica
SGA_v2.0_scaffold548G52855 Striga asiatica
SHI21974 Sapria himalayana
SMO118G0481 Selaginella moellendorffii
SMO133G0024 Selaginella moellendorffii
Solyc04g014270.3 Solanum lycopersicum
Solyc11g010450.2 Solanum lycopersicum
Sopen04g006390 Solanum pennellii
Sopen11g005230 Solanum pennellii
Sp4g01500 Schrenkiella parvula
Sp7g35740 Schrenkiella parvula
TAR374G1098 Trochodendron aralioides
TAR628G0077 Trochodendron aralioides
THA.LOC104804170 Tarenaya hassleriana
Thecc.01G092600 Theobroma cacao
Thhalv10000117m.g Eutrema salsugineum
Thhalv10024871m.g Eutrema salsugineum
TPR.G14617 Trifolium pratense
TPR.G29975 Trifolium pratense
TWI53G0564 Tripterygium wilfordii
TWI74G0724 Tripterygium wilfordii
unitig_899.g14558 Utricularia gibba
vmacro12992 Vaccinium macrocarpon
vmacro18571 Vaccinium macrocarpon
VMungo0251G0351 Vigna mungo
VMungo1215G1570 Vigna mungo
Zm00001eb041270 Zea mays
Zm00001eb048390 Zea mays
Zm00001eb099530 Zea mays

User provided reference genes

Program Settings