Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p30260 Brassica napus
A03p57890 Brassica napus
A08p24610 Brassica napus
A09p36300 Brassica napus
Aa31LG6G5510 Aethionema arabicum
Aa31sc91G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2672 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2673 Anthoceros agrestis
Actinidia06697 Actinidia chinensis
Actinidia18596 Actinidia chinensis
Actinidia36694 Actinidia chinensis
Actinidia36695 Actinidia chinensis
Ah.04g162260 Amaranthus hybridus
AL1G44160 Arabidopsis lyrata
AL1G44190 Arabidopsis lyrata
Aqoxy2G02949 Aquilegia oxysepala
Aqoxy3G00687_Aqoxy3G00688 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8EA83L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q3AX4Y Arachis hypogaea
AT1G30240 Arabidopsis thaliana
ATR0564G271 Amborella trichopoda
ATR0737G134 Amborella trichopoda
Atru.chr12.1013 Acer truncatum
Atru.chr12.1014 Acer truncatum
AUR62042073 Chenopodium quinoa
AUR62043305 Chenopodium quinoa
BcaB03g12203 Brassica carinata
BcaB07g32622 Brassica carinata
BcaB08g34815 Brassica carinata
BcaC01g00173 Brassica carinata
BcaC05g27050 Brassica carinata
BolC3t19907H Brassica oleracea
BolC3t21454H Brassica oleracea
BolC5t29265H Brassica oleracea
BolC5t31639H Brassica oleracea
BolC7t45516H Brassica oleracea
BraA03t14853Z Brassica rapa
BraA08t34416Z Brassica rapa
BraA09t39154Z Brassica rapa
C02p37120 Brassica napus
C03p15410 Brassica napus
C03p54150 Brassica napus
C03p76500 Brassica napus
C03p91380 Brassica napus
C05p29080 Brassica napus
CAN.G645.3 Capsicum annuum
CAN.G645.4 Capsicum annuum
CANSAT56G3624 Cannabis sativa
CARHR029630 Cardamine hirsuta
Carub.0001s2847 Capsella rubella
Ca_23589_v3 Cicer arietinum L.
CBR_g45421 Chara braunii
Cc02_g09730 Coffea canephora
Cc02_g09740 Coffea canephora
Cc02_g29780 Coffea canephora
Cc02_g29810 Coffea canephora
Cc02_g29830 Coffea canephora
CDE02G4417 Ceratophyllum demersum
CDE09G0981 Ceratophyllum demersum
Cfa011279 Carpinus fangiana
Ciclev10027803m.g Citrus clementina
CiPaw.13G039500 Carya illinoinensis
ClCG05G018390 Citrullus lanatus
ClCG09G007450 Citrullus lanatus
COL.COLO4_28858 Corchorus olitorius
Cpa.g.sc183.16 Carica papaya
Cre01.g057061 Chlamydomonas reinhardtii
CsaV3_5G035420 Cucumis sativus L.
CsaV3_5G035440 Cucumis sativus L.
CsaV3_5G035460 Cucumis sativus L.
CsaV3_5G035480 Cucumis sativus L.
CsaV3_5G035490 Cucumis sativus L.
CsaV3_5G035510 Cucumis sativus L.
CsaV3_5G035520 Cucumis sativus L.
CSS0019720 Camellia sinensis var. sinensis
CSS0031708 Camellia sinensis var. sinensis
DCAR_006339 Daucus carota
Dinv06533 Davidia involucrata
Dinv11846 Davidia involucrata
Duzib052G0830 Durio zibethinus
ECA238G3867 Erigeron canadensis
EL10Ac4g08659 Beta vulgaris
Eucgr.J00989 Eucalyptus grandis
FAN04G1757 Fragaria x ananassa
FAN08G1578 Fragaria x ananassa
FAN18G3192 Fragaria x ananassa
FAN18G4146 Fragaria x ananassa
FvH4_5g22640 Fragaria vesca
Glyma.07G058700 Glycine max
Glyma.14G085550 Glycine max
Glyma.16G027600 Glycine max
Gohir.A06G169100 Gossypium hirsutum
Gohir.A09G018100 Gossypium hirsutum
Gohir.A09G018150 Gossypium hirsutum
Gohir.D06G176700 Gossypium hirsutum
Gohir.D09G017550 Gossypium hirsutum
Gorai.006G020600 Gossypium raimondii
Gorai.010G208000 Gossypium raimondii
GSVIVG01011385001 Vitis vinifera
GSVIVG01032568001 Vitis vinifera
HanXRQChr11g0342181 Helianthus annuus
Haze_02499 Corylus avellana
Haze_02500 Corylus avellana
Haze_02506 Corylus avellana
Haze_25332 Corylus avellana
Hma1.2p1_0053F.1_g030920 Hydrangea macrophylla
Hma1.2p1_0145F.1_g065330 Hydrangea macrophylla
Hma1.2p1_2419F.1_g321820 Hydrangea macrophylla
HPP92_013069 Vanilla planifolia
Hund22286 Selenicereus undatus
Hund22291 Selenicereus undatus
Hund23993 Selenicereus undatus
Lalb_Chr10g0100231 Lupinus albus
Lj1g0028024 Lotus japonicus
Lj3C928G2 Lonicera japonica
Lj3g0004598 Lotus japonicus
Lsat_1_v5_gn_2_104580 Lactuca sativa
Manes.11G108901 Manihot esculenta
Mapoly0108s0040 Marchantia polymorpha
MBI02_g14487_MAGBIO Magnolia biondii
MCO15G512 Micromonas commoda
MD09G1289100 Malus domestica
MD09G1289200 Malus domestica
MD09G1292100 Malus domestica
MD17G1284000 Malus domestica
Medtr3g075460 Medicago truncatula
Medtr8g028030 Medicago truncatula
MELO3C012354.2 Cucumis melo
Migut.F00912 Erythranthe guttata
MSTRG.11586 Avicennia marina
MSTRG.26055 Avicennia marina
MSTRG.27536 Avicennia marina
MSTRG.27538 Avicennia marina
Nitab4.5_0001437g0090 Nicotiana tabacum
Nitab4.5_0005622g0060 Nicotiana tabacum
Nn3g17196 Nelumbo nucifera
Nn3g17199 Nelumbo nucifera
Nn4g23115 Nelumbo nucifera
Oeu025587.1 Olea europaea
Os05g0295900 Oryza sativa ssp. japonica
Os06g0343900 Oryza sativa ssp. japonica
Peaxi162Scf00173g00417 Petunia axillaris
PGR044G2128 Punica granatum
PGSC0003DMG400023977 Solanum tuberosum
Phvul.003G001400 Phaseolus vulgaris
Phvul.010G110700 Phaseolus vulgaris
Potri.010G238000 Populus trichocarpa
Pp3c15_8100 Physcomitrium patens
Pp3c15_8103 Physcomitrium patens
Pp3c8_9490 Physcomitrium patens
Prupe.3G003400 Prunus persica
Prupe.6G159300 Prunus persica
Psat4g159240 Pisum sativum
PSO017G2985 Papaver somniferum
PSO478G3548 Papaver somniferum
QL04p046058 Quercus lobata
QL04p046254 Quercus lobata
RcHm_v2.0_Chr7g0211051 Rosa chinensis
Rhsim03G0098900 Rhododendron simsii
Sabra10G0186200 Salix brachista
SalBow6G4638 Salvia bowleyana
Sc06g0002330 Simmondsia chinensis
Sed0007749 Sechium edule
Sed0011677 Sechium edule
SEGI_05252 Sequoiadendron giganteum
SEGI_27789 Sequoiadendron giganteum
SGA_v2.0_scaffold295G47526 Striga asiatica
SHI24302 Sapria himalayana
SHI24306 Sapria himalayana
SHI24307 Sapria himalayana
SHI26361 Sapria himalayana
SMO364G0406 Selaginella moellendorffii
Solyc11g007010.2 Solanum lycopersicum
Sopen11g002930 Solanum pennellii
Sp1g26080 Schrenkiella parvula
TAR622G0410 Trochodendron aralioides
THA.LOC104820658 Tarenaya hassleriana
Thecc.10G111800 Theobroma cacao
Thhalv10006813m.g Eutrema salsugineum
TPR.G23930 Trifolium pratense
TPR.G8757 Trifolium pratense
TWI38G1480 Tripterygium wilfordii
TWI63G1716 Tripterygium wilfordii
VMungo0331G0994 Vigna mungo
Zm00001eb231330 Zea mays

User provided reference genes

Program Settings