Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03430 Brassica napus
A10p22850 Brassica napus
Aa31LG11G13400 Aethionema arabicum
Aa31sc24G110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5767 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2595 Anthoceros agrestis
Actinidia15898 Actinidia chinensis
Ah.10g037630 Amaranthus hybridus
AL6G27090 Arabidopsis lyrata
Aqoxy1G03195 Aquilegia oxysepala
Aqoxy3G00198 Aquilegia oxysepala
Aqoxy3G00199 Aquilegia oxysepala
Aqoxy3G00200 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3AG3I6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CE0ZIG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JMF5N7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K3Z2GB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LXU3L0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJYU1D Arachis hypogaea
AT5G16210 Arabidopsis thaliana
ATR0681G033 Amborella trichopoda
ATR0681G242 Amborella trichopoda
Atru.chr1.1617 Acer truncatum
AUR62009038 Chenopodium quinoa
AUR62009039 Chenopodium quinoa
AUR62023267 Chenopodium quinoa
BcaB05g22772 Brassica carinata
BcaB08g36855 Brassica carinata
BcaC03g18474 Brassica carinata
BcaC03g18478 Brassica carinata
BcaC03g18481 Brassica carinata
BcaC04g18898 Brassica carinata
BcaNung02226 Brassica carinata
BolC2t06743H Brassica oleracea
BolC9t58921H Brassica oleracea
BraA02t05314Z Brassica rapa
BraA10t44352Z Brassica rapa
C02p08190 Brassica napus
C09p60810 Brassica napus
CAN.G1113.1 Capsicum annuum
CANSAT78G2002 Cannabis sativa
CARHR197100 Cardamine hirsuta
Carub.0006s1440 Capsella rubella
Ca_04138_v3 Cicer arietinum L.
Ca_04476_v3 Cicer arietinum L.
Ca_08090_v3 Cicer arietinum L.
Ca_10866_v3 Cicer arietinum L.
Ca_27564_v3 Cicer arietinum L.
CBR_g34722 Chara braunii
Cc07_g08540 Coffea canephora
CDE02G1293 Ceratophyllum demersum
CDE02G3249 Ceratophyllum demersum
CDE09G0638 Ceratophyllum demersum
CDE09G1345 Ceratophyllum demersum
Cfa007893 Carpinus fangiana
Ciclev10010937m.g Citrus clementina
CiPaw.04G044200 Carya illinoinensis
ClCG11G007740 Citrullus lanatus
COL.COLO4_09374 Corchorus olitorius
Cpa.g.sc170.32 Carica papaya
Cre03.g205137 Chlamydomonas reinhardtii
CsaV3_2G033840 Cucumis sativus L.
CSS0016689 Camellia sinensis var. sinensis
CSS0025104 Camellia sinensis var. sinensis
CSS0045616 Camellia sinensis var. sinensis
CSS0049688 Camellia sinensis var. sinensis
DCAR_025903 Daucus carota
Dinv12730 Davidia involucrata
Dinv33964 Davidia involucrata
Dinv33965 Davidia involucrata
Dinv34794 Davidia involucrata
Dinv34795 Davidia involucrata
Duzib133G0570 Durio zibethinus
Duzib138G1780 Durio zibethinus
ECA232G2944 Erigeron canadensis
EL10Ac2g04530 Beta vulgaris
Eucgr.F02790 Eucalyptus grandis
FAN01G1119 Fragaria x ananassa
FAN01G1795 Fragaria x ananassa
FAN03G2066 Fragaria x ananassa
FAN06G2375 Fragaria x ananassa
FAN10G2177 Fragaria x ananassa
FvH4_7g07990 Fragaria vesca
Glyma.02G089000 Glycine max
Glyma.05G002100 Glycine max
Glyma.19G002000 Glycine max
Gohir.A07G174400 Gossypium hirsutum
Gohir.A08G093462 Gossypium hirsutum
Gohir.A11G165800 Gossypium hirsutum
Gohir.D07G181700 Gossypium hirsutum
Gohir.D11G172000 Gossypium hirsutum
Gorai.001G202700 Gossypium raimondii
Gorai.007G184400 Gossypium raimondii
GSVIVG01030979001 Vitis vinifera
GSVIVG01030980001 Vitis vinifera
HanXRQChr09g0262691 Helianthus annuus
HanXRQChr09g0262701 Helianthus annuus
Haze_14184 Corylus avellana
Hma1.2p1_0391F.1_g142780 Hydrangea macrophylla
HPP92_020150 Vanilla planifolia
Hund16184 Selenicereus undatus
Lalb_Chr00c03g0404231 Lupinus albus
Lalb_Chr00c03g0404241 Lupinus albus
Lalb_Chr06g0176731 Lupinus albus
Lalb_Chr10g0091441 Lupinus albus
Lj1g0020363 Lotus japonicus
Lj2g0002647 Lotus japonicus
Lj4C184G4 Lonicera japonica
Lsat_1_v5_gn_1_73461 Lactuca sativa
Lsat_1_v5_gn_4_155600 Lactuca sativa
Lsat_1_v5_gn_4_155620 Lactuca sativa
Lsat_1_v5_gn_5_147680 Lactuca sativa
Lsat_1_v5_gn_9_96101 Lactuca sativa
Manes.01G112900 Manihot esculenta
Manes.02G071350 Manihot esculenta
Mapoly0103s0005 Marchantia polymorpha
MBI16_g38075_MAGBIO Magnolia biondii
MBI16_g38076_MAGBIO Magnolia biondii
MBI16_g39817_MAGBIO Magnolia biondii
MCO16G648 Micromonas commoda
MD09G1255900 Malus domestica
MD17G1249200 Malus domestica
MD17G1249700 Malus domestica
MD17G1249900 Malus domestica
Medtr6g004240 Medicago truncatula
Medtr7g082650 Medicago truncatula
MELO3C008156.2 Cucumis melo
Migut.H00238 Erythranthe guttata
MSTRG.2778 Avicennia marina
MSTRG.2779 Avicennia marina
Nitab4.5_0000753g0220 Nicotiana tabacum
Nitab4.5_0008521g0020 Nicotiana tabacum
Nn4g23954 Nelumbo nucifera
Oeu050384.1 Olea europaea
Os01g0514300 Oryza sativa ssp. japonica
Peaxi162Scf00877g00020 Petunia axillaris
PGR004G1031 Punica granatum
Phvul.004G002300 Phaseolus vulgaris
Phvul.008G008300 Phaseolus vulgaris
Potri.004G095900 Populus trichocarpa
Pp3c18_21770 Physcomitrium patens
Pp3c18_21850 Physcomitrium patens
Pp3c3_38010 Physcomitrium patens
Prupe.3G148000 Prunus persica
Psat1g004680 Pisum sativum
Psat1g052560 Pisum sativum
Psat3g097680 Pisum sativum
PSO017G4387 Papaver somniferum
PSO478G1111 Papaver somniferum
QL02p050339 Quercus lobata
QL02p050347 Quercus lobata
QL04p012047 Quercus lobata
QL04p012055 Quercus lobata
RcHm_v2.0_Chr3g0494111 Rosa chinensis
RcHm_v2.0_Chr3g0494121 Rosa chinensis
RcHm_v2.0_Chr3g0494131 Rosa chinensis
Rhsim10G0072600 Rhododendron simsii
Sabra04G0065000 Salix brachista
Sc10g0001060 Simmondsia chinensis
Sed0005237 Sechium edule
SEGI_01406 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18119 Striga asiatica
SMO356G0339 Selaginella moellendorffii
Solyc02g086320.1 Solanum lycopersicum
Solyc02g086330.4 Solanum lycopersicum
Sopen02g031000 Solanum pennellii
Sp6g27950 Schrenkiella parvula
TAR374G0202 Trochodendron aralioides
TAR374G0225 Trochodendron aralioides
TAR622G0110 Trochodendron aralioides
THA.LOC104820941 Tarenaya hassleriana
Thecc.04G128900 Theobroma cacao
Thhalv10012470m.g Eutrema salsugineum
Thhalv10014979m.g Eutrema salsugineum
TPR.G16544 Trifolium pratense
TPR.G213 Trifolium pratense
TPR.G25232 Trifolium pratense
TPR.G25236 Trifolium pratense
TWI53G1720 Tripterygium wilfordii
unitig_899.g14514 Utricularia gibba
vmacro05528 Vaccinium macrocarpon
vmacro22953 Vaccinium macrocarpon
VMungo0464G0444 Vigna mungo
VMungo1383G2782 Vigna mungo
Zm00001eb341830 Zea mays
Zm00001eb341840 Zea mays

User provided reference genes

Program Settings