Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p01480 Brassica napus
Aa31LG5G1680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis
Actinidia04687 Actinidia chinensis
Actinidia04728 Actinidia chinensis
Actinidia20995 Actinidia chinensis
Actinidia25847 Actinidia chinensis
Actinidia27762 Actinidia chinensis
Ah.10g031040 Amaranthus hybridus
AL6G51220 Arabidopsis lyrata
Aqoxy328s001 Aquilegia oxysepala
Aqoxy3G01218 Aquilegia oxysepala
Aqoxy3G02976 Aquilegia oxysepala
Aqoxy7G02110 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1JN5P4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3FW809 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3YE891 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.99VT9P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7DSY0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z1FAFN Arachis hypogaea
AT4G02030 Arabidopsis thaliana
ATR0796G177 Amborella trichopoda
Atru.chr5.1002 Acer truncatum
Atru.chr5.1003 Acer truncatum
AUR62011807 Chenopodium quinoa
AUR62024653 Chenopodium quinoa
BcaB01g02087 Brassica carinata
BcaC04g24028 Brassica carinata
BcaC04g24029 Brassica carinata
BolC9t53093H Brassica oleracea
BraA09t35809Z Brassica rapa
C09p01600 Brassica napus
CAN.G1280.26 Capsicum annuum
CAN.G777.11 Capsicum annuum
CAN.G777.12 Capsicum annuum
CANSAT25G2078 Cannabis sativa
CARHR249640 Cardamine hirsuta
Carub.0006s3520 Capsella rubella
Ca_09209_v3 Cicer arietinum L.
Ca_10285_v3 Cicer arietinum L.
CBR_g48220 Chara braunii
Cc00_g34360 Coffea canephora
Cc00_g34370 Coffea canephora
Cc01_g21390 Coffea canephora
Cc02_g26000 Coffea canephora
Cc02_g33820 Coffea canephora
Cc03_g12210 Coffea canephora
Cc04_g08620 Coffea canephora
Cc05_g04720 Coffea canephora
Cc11_g04100 Coffea canephora
CDE11G0331 Ceratophyllum demersum
Ciclev10010795m.g Citrus clementina
Ciclev10018936m.g Citrus clementina
CiPaw.07G117400 Carya illinoinensis
ClCG07G000710 Citrullus lanatus
ClCG10G006350 Citrullus lanatus
ClCG10G006380 Citrullus lanatus
COL.COLO4_23233 Corchorus olitorius
COL.COLO4_26725 Corchorus olitorius
Cpa.g.sc18.42 Carica papaya
Cre09.g404650 Chlamydomonas reinhardtii
CsaV3_7G025080 Cucumis sativus L.
CSS0010179 Camellia sinensis var. sinensis
CSS0012467 Camellia sinensis var. sinensis
CSS0030911 Camellia sinensis var. sinensis
DCAR_005759 Daucus carota
DCAR_005760 Daucus carota
DCAR_012354 Daucus carota
Dinv10095 Davidia involucrata
Dinv10096 Davidia involucrata
Dinv10097 Davidia involucrata
Dinv33114 Davidia involucrata
Duzib133G0716 Durio zibethinus
Duzib138G1700 Durio zibethinus
EL10As5g23529 Beta vulgaris
Eucgr.H00929 Eucalyptus grandis
FAN04G1824 Fragaria x ananassa
FAN08G2818 Fragaria x ananassa
FAN18G4464 Fragaria x ananassa
FvH4_5g39210 Fragaria vesca
Glyma.02G012800 Glycine max
Glyma.10G013400 Glycine max
Glyma.14G155300 Glycine max
Glyma.19G216151 Glycine max
Gohir.A11G109900 Gossypium hirsutum
Gohir.A12G125100 Gossypium hirsutum
Gohir.D11G114600 Gossypium hirsutum
Gohir.D12G128800 Gossypium hirsutum
Gorai.007G122900 Gossypium raimondii
Gorai.008G139800 Gossypium raimondii
Gorai.008G140000 Gossypium raimondii
GSVIVG01028119001 Vitis vinifera
HanXRQChr15g0464131 Helianthus annuus
Haze_05039 Corylus avellana
Hma1.2p1_0023F.1_g015020 Hydrangea macrophylla
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla
Hma1.2p1_0568F.1_g180240 Hydrangea macrophylla
HPP92_004593 Vanilla planifolia
Hund09630 Selenicereus undatus
Lalb_Chr06g0166851 Lupinus albus
Lalb_Chr15g0078151 Lupinus albus
Lalb_Chr15g0078161 Lupinus albus
Lalb_Chr15g0078171 Lupinus albus
Lj1g0012423 Lotus japonicus
Lj2A1205T44 Lonicera japonica
Lj2A1205T45 Lonicera japonica
Lj5g0013347 Lotus japonicus
Lsat_1_v5_gn_1_35460 Lactuca sativa
Manes.01G227700 Manihot esculenta
Manes.05G003200 Manihot esculenta
Mapoly0167s0022 Marchantia polymorpha
MCO10G287 Micromonas commoda
MD03G1295300 Malus domestica
MD11G1314200 Malus domestica
Medtr1g087050 Medicago truncatula
Medtr1g087100 Medicago truncatula
Medtr7g109490 Medicago truncatula
MELO3C023707.2 Cucumis melo
Migut.H00631 Erythranthe guttata
Migut.N00925 Erythranthe guttata
MSTRG.21685 Avicennia marina
Nitab4.5_0000363g0270 Nicotiana tabacum
Nitab4.5_0001301g0010 Nicotiana tabacum
Nitab4.5_0006144g0010 Nicotiana tabacum
Nitab4.5_0011075g0020 Nicotiana tabacum
Nn4g25601 Nelumbo nucifera
Oeu008471.2 Olea europaea
Oeu041216.1 Olea europaea
Oeu049910.1 Olea europaea
Oeu049914.1 Olea europaea
Os03g0737800 Oryza sativa ssp. japonica
Peaxi162Scf00058g02630 Petunia axillaris
Peaxi162Scf00691g00222 Petunia axillaris
PGR119G2139 Punica granatum
Phvul.001G212700 Phaseolus vulgaris
Phvul.007G214400 Phaseolus vulgaris
Potri.002G196300 Populus trichocarpa
Potri.014G120900 Populus trichocarpa
Pp3c12_23510 Physcomitrium patens
Pp3c3_36800 Physcomitrium patens
PRCOL_00004542 Prasinoderma coloniale
Prupe.5G007800 Prunus persica
Psat3g020160 Pisum sativum
Psat6g161800 Pisum sativum
PSO017G2448 Papaver somniferum
PSO063G6259 Papaver somniferum
QL12p019966 Quercus lobata
RcHm_v2.0_Chr7g0241471 Rosa chinensis
Rhsim01G0290600 Rhododendron simsii
Sabra02G0160700 Salix brachista
SalBow2G3626 Salvia bowleyana
Sc05g0000420 Simmondsia chinensis
Sed0012026 Sechium edule
SEGI_09541 Sequoiadendron giganteum
SEGI_20894 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14324 Striga asiatica
SHI03673 Sapria himalayana
SHI08433 Sapria himalayana
SHI15042 Sapria himalayana
SMO116G0335 Selaginella moellendorffii
SMO195G0031 Selaginella moellendorffii
Solyc01g079490.2 Solanum lycopersicum
Solyc06g009650.3 Solanum lycopersicum
Sopen01g031260 Solanum pennellii
Sopen06g004290 Solanum pennellii
Sp6g01910 Schrenkiella parvula
TAR362G1176 Trochodendron aralioides
TAR633G1939 Trochodendron aralioides
THA.LOC104799236 Tarenaya hassleriana
THA.LOC104801306 Tarenaya hassleriana
Thecc.01G313200 Theobroma cacao
Thhalv10028443m.g Eutrema salsugineum
TPR.G19758 Trifolium pratense
TPR.G4118 Trifolium pratense
TWI36G0074 Tripterygium wilfordii
unitig_736.g22937 Utricularia gibba
unitig_736.g22938 Utricularia gibba
vmacro15111 Vaccinium macrocarpon
VMungo0720G0598 Vigna mungo
VMungo1383G3239 Vigna mungo
Zm00001eb056500 Zea mays
Zm00001eb215280 Zea mays

User provided reference genes

Program Settings