Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p00240 Brassica napus
A09p54970 Brassica napus
Aa31LG10G17000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2504 Anthoceros agrestis
Actinidia00758 Actinidia chinensis
Actinidia36120 Actinidia chinensis
Ah.04g163040 Amaranthus hybridus
AL5G46010 Arabidopsis lyrata
Aqoxy2G03366 Aquilegia oxysepala
Aqoxy5G03754 Aquilegia oxysepala
Aqoxy5G03756 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EK6TEN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EWUD7T Arachis hypogaea
AT3G63170 Arabidopsis thaliana
ATR0332G016 Amborella trichopoda
ATR0751G184 Amborella trichopoda
ATR0824G228 Amborella trichopoda
Atru.chr5.1449 Acer truncatum
AUR62004806 Chenopodium quinoa
AUR62036022 Chenopodium quinoa
BcaC02g10350 Brassica carinata
BcaC07g40795 Brassica carinata
BcaC07g42706 Brassica carinata
BolC4t24538H Brassica oleracea
BolC8t51366H Brassica oleracea
BraA04t15743Z Brassica rapa
BraA09t40906Z Brassica rapa
C04p30060 Brassica napus
C08p37880 Brassica napus
CAN.G1057.9 Capsicum annuum
CAN.G1549.5 Capsicum annuum
CANSAT25G0400 Cannabis sativa
CANSAT64G1847 Cannabis sativa
CARHR173490 Cardamine hirsuta
Carub.0005s2984 Capsella rubella
Ca_08605_v3 Cicer arietinum L.
Cc01_g19410 Coffea canephora
Cc07_g01580 Coffea canephora
CDE08G0066 Ceratophyllum demersum
CDE10G1045 Ceratophyllum demersum
Cfa006149 Carpinus fangiana
Cfa007345 Carpinus fangiana
Cfa007348 Carpinus fangiana
Cfa007350 Carpinus fangiana
Ciclev10017779m.g Citrus clementina
Ciclev10021543m.g Citrus clementina
CiPaw.07G091100 Carya illinoinensis
ClCG09G007090 Citrullus lanatus
COL.COLO4_09084 Corchorus olitorius
COL.COLO4_29156 Corchorus olitorius
Cpa.g.c26638.2 Carica papaya
Cpa.g.sc52.42 Carica papaya
CsaV3_7G028080 Cucumis sativus L.
CSS0023947 Camellia sinensis var. sinensis
CSS0025689 Camellia sinensis var. sinensis
CSS0032324 Camellia sinensis var. sinensis
CSS0033900 Camellia sinensis var. sinensis
DCAR_002729 Daucus carota
DCAR_021726 Daucus carota
Dinv32927 Davidia involucrata
Dinv33435 Davidia involucrata
Duzib133G1246 Durio zibethinus
ECA232G2124 Erigeron canadensis
ECA248G3015 Erigeron canadensis
EL10Ac4g08964 Beta vulgaris
Eucgr.I01736 Eucalyptus grandis
Eucgr.K03363 Eucalyptus grandis
FAN15G2640 Fragaria x ananassa
FAN20G0815 Fragaria x ananassa
FAN24G0046 Fragaria x ananassa
FAN27G1909 Fragaria x ananassa
FvH4_2g23480 Fragaria vesca
Glyma.03G154600 Glycine max
Glyma.19G156900 Glycine max
Gohir.A07G223800 Gossypium hirsutum
Gohir.A08G186100 Gossypium hirsutum
Gohir.D07G230900 Gossypium hirsutum
Gohir.D08G204200 Gossypium hirsutum
Gohir.D08G204766 Gossypium hirsutum
Gorai.001G266000 Gossypium raimondii
Gorai.004G216200 Gossypium raimondii
Gorai.004G216800 Gossypium raimondii
GSVIVG01001154001 Vitis vinifera
GSVIVG01032392001 Vitis vinifera
HanXRQChr01g0003041 Helianthus annuus
HanXRQChr09g0255251 Helianthus annuus
Haze_04700 Corylus avellana
Haze_14751 Corylus avellana
Hma1.2p1_1146F.1_g261450 Hydrangea macrophylla
Hma1.2p1_1747F.1_g300460 Hydrangea macrophylla
Hma1.2p1_2120F.1_g314440 Hydrangea macrophylla
Hma1.2p1_2550F.1_g324240 Hydrangea macrophylla
HPP92_001617 Vanilla planifolia
Hund06892 Selenicereus undatus
Lalb_Chr01g0020131 Lupinus albus
Lj1C47T3 Lonicera japonica
Lj1g0003544 Lotus japonicus
Lju41A42G102 Lonicera japonica
Lsat_1_v5_gn_4_184180 Lactuca sativa
Lsat_1_v5_gn_5_187880 Lactuca sativa
Manes.05G077100 Manihot esculenta
Manes.15G150400 Manihot esculenta
MBI04_g29619_MAGBIO Magnolia biondii
MBI06_g16063_MAGBIO Magnolia biondii
MD03G1263700 Malus domestica
Medtr7g094980 Medicago truncatula
MELO3C015829.2 Cucumis melo
Migut.D00305 Erythranthe guttata
Migut.H00065 Erythranthe guttata
MSTRG.21554 Avicennia marina
Nitab4.5_0000759g0170 Nicotiana tabacum
Nitab4.5_0001550g0100 Nicotiana tabacum
Nitab4.5_0001860g0060 Nicotiana tabacum
Nitab4.5_0002529g0060 Nicotiana tabacum
Nitab4.5_0003318g0090 Nicotiana tabacum
Nitab4.5_0008567g0020 Nicotiana tabacum
Nn3g16699 Nelumbo nucifera
Nn4g26280 Nelumbo nucifera
Oeu014936.1 Olea europaea
Oeu018142.1 Olea europaea
Oeu034963.2 Olea europaea
Oeu054624.1 Olea europaea
Os07g0571600 Oryza sativa ssp. japonica
Peaxi162Scf00080g01317 Petunia axillaris
Peaxi162Scf00129g01654 Petunia axillaris
Peaxi162Scf00783g00216 Petunia axillaris
PGR044G2334 Punica granatum
PGR142G2457 Punica granatum
PGR142G3625 Punica granatum
PGSC0003DMG400006961 Solanum tuberosum
PGSC0003DMG400020127 Solanum tuberosum
Phvul.001G152000 Phaseolus vulgaris
Potri.002G052200 Populus trichocarpa
Pp3c11_25580 Physcomitrium patens
Prupe.3G292900 Prunus persica
Prupe.8G240000 Prunus persica
Prupe.8G240100 Prunus persica
Psat0s4437g0040 Pisum sativum
PSO063G1117 Papaver somniferum
PSO111G0070 Papaver somniferum
PSO111G0085 Papaver somniferum
PSO170G4994 Papaver somniferum
PSO210G3475 Papaver somniferum
PSO541G4249 Papaver somniferum
PSO541G4480 Papaver somniferum
PSO754G0009 Papaver somniferum
PSO754G0050 Papaver somniferum
PSO832G3286 Papaver somniferum
QL12p021592 Quercus lobata
RcHm_v2.0_Chr6g0290951 Rosa chinensis
Rhsim10G0015500 Rhododendron simsii
Rhsim10G0016600 Rhododendron simsii
Rhsim13G0025700 Rhododendron simsii
Sabra02G0042300 Salix brachista
Sabra16G0223400 Salix brachista
SalBow1G5926 Salvia bowleyana
SalBow4G0768 Salvia bowleyana
Sed0015956 Sechium edule
SEGI_28474 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08275 Striga asiatica
SGA_v2.0_scaffold1G00486 Striga asiatica
SMO352G0006 Selaginella moellendorffii
Solyc02g067870.3 Solanum lycopersicum
Solyc06g084260.3 Solanum lycopersicum
Sopen02g016990 Solanum pennellii
Sopen06g035650 Solanum pennellii
Sp5g00360 Schrenkiella parvula
TAR365G0988 Trochodendron aralioides
TAR374G0231 Trochodendron aralioides
TAR622G0767 Trochodendron aralioides
TAR625G0172 Trochodendron aralioides
TAR625G0926 Trochodendron aralioides
TAR629G3331 Trochodendron aralioides
TAR633G0456 Trochodendron aralioides
THA.LOC104802230 Tarenaya hassleriana
Thecc.01G277600 Theobroma cacao
Thecc.04G018400 Theobroma cacao
Thhalv10006140m.g Eutrema salsugineum
TPR.G9913 Trifolium pratense
TWI56G0726 Tripterygium wilfordii
TWI59G0219 Tripterygium wilfordii
unitig_0.g1140 Utricularia gibba
vmacro02577 Vaccinium macrocarpon
vmacro05869 Vaccinium macrocarpon
VMungo1383G2240 Vigna mungo
Zm00001eb107290 Zea mays

User provided reference genes

Program Settings