Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p07220 Brassica napus
A09p45200 Brassica napus
Aa31LG10G7230 Aethionema arabicum
Actinidia28306 Actinidia chinensis
Actinidia28308 Actinidia chinensis
Actinidia31044 Actinidia chinensis
Actinidia31045 Actinidia chinensis
Actinidia31046 Actinidia chinensis
Actinidia31047 Actinidia chinensis
Actinidia31686 Actinidia chinensis
Actinidia31687 Actinidia chinensis
Actinidia31688 Actinidia chinensis
Actinidia32320 Actinidia chinensis
Actinidia32321 Actinidia chinensis
Ah.10g024830 Amaranthus hybridus
AL5G32710 Arabidopsis lyrata
Aqoxy1G00213 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7I49QA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SKP1EQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V362W9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X69RYV Arachis hypogaea
AT3G52140 Arabidopsis thaliana
ATR0605G051 Amborella trichopoda
Atru.chr11.2631 Acer truncatum
AUR62009368 Chenopodium quinoa
AUR62023049 Chenopodium quinoa
BcaB02g08585 Brassica carinata
BcaC02g09276 Brassica carinata
BcaNung06096 Brassica carinata
BolC4t25662H Brassica oleracea
BolC8t50358H Brassica oleracea
BraA04t16417Z Brassica rapa
BraA09t39983Z Brassica rapa
C04p40780 Brassica napus
C08p27410 Brassica napus
CAN.G1393.20 Capsicum annuum
CANSAT56G1134 Cannabis sativa
CARHR161880 Cardamine hirsuta
Carub.0005s1848 Capsella rubella
Ca_26231_v3 Cicer arietinum L.
CBR_g110 Chara braunii
Cc02_g27450 Coffea canephora
CDE05G2426 Ceratophyllum demersum
CDE05G2577 Ceratophyllum demersum
CDE05G3296 Ceratophyllum demersum
Cfa022140 Carpinus fangiana
Ciclev10030514m.g Citrus clementina
CiPaw.13G001900 Carya illinoinensis
ClCG10G012550 Citrullus lanatus
COL.COLO4_23904 Corchorus olitorius
Cpa.g.sc234.1 Carica papaya
Cpa.g.sc945.1 Carica papaya
Cpa.g.sc945.2 Carica papaya
CsaV3_3G032340 Cucumis sativus L.
CSS0018905 Camellia sinensis var. sinensis
DCAR_029635 Daucus carota
Dinv09382 Davidia involucrata
Dinv43470 Davidia involucrata
Dinv43904 Davidia involucrata
Duzib268G0099 Durio zibethinus
ECA248G3304 Erigeron canadensis
EL10Ac2g04309 Beta vulgaris
Eucgr.J01252 Eucalyptus grandis
FAN07G2146 Fragaria x ananassa
FAN12G0010 Fragaria x ananassa
FAN12G0382 Fragaria x ananassa
FAN12G2088 Fragaria x ananassa
FAN17G0189 Fragaria x ananassa
FAN22G1903 Fragaria x ananassa
FvH4_4g12380 Fragaria vesca
Glyma.03G039901 Glycine max
Glyma.06G207751 Glycine max
Glyma.08G152400 Glycine max
Glyma.09G081340 Glycine max
Glyma.09G081551 Glycine max
Glyma.11G137151 Glycine max
Glyma.15G271800 Glycine max
Glyma.20G040200 Glycine max
Gohir.A08G146100 Gossypium hirsutum
Gohir.D08G167000 Gossypium hirsutum
Gorai.004G174400 Gossypium raimondii
GSVIVG01032046001 Vitis vinifera
HanXRQChr01g0017271 Helianthus annuus
HanXRQChr12g0377841 Helianthus annuus
HanXRQChr17g0548731 Helianthus annuus
Haze_03250 Corylus avellana
HPP92_003004 Vanilla planifolia
HPP92_003005 Vanilla planifolia
HPP92_003007 Vanilla planifolia
Lalb_Chr20g0108081 Lupinus albus
Lalb_Chr20g0108091 Lupinus albus
Lalb_Chr25g0283241 Lupinus albus
Lj3g0008997 Lotus japonicus
Lj3g0018349 Lotus japonicus
Lj7C568T3 Lonicera japonica
Lsat_1_v5_gn_1_110320 Lactuca sativa
Manes.07G003200 Manihot esculenta
Mapoly0060s0041 Marchantia polymorpha
MBI01_g15744_MAGBIO Magnolia biondii
MBI01_g25789_MAGBIO Magnolia biondii
MBI01_g43277_MAGBIO Magnolia biondii
MD02G1316400 Malus domestica
MD07G1005500 Malus domestica
Medtr0321s0030 Medicago truncatula
Medtr3g027610 Medicago truncatula
MELO3C023955.2 Cucumis melo
MELO3C032192.2 Cucumis melo
Migut.B01342 Erythranthe guttata
Migut.N01485 Erythranthe guttata
MSTRG.17057 Avicennia marina
Nitab4.5_0001542g0140 Nicotiana tabacum
Nitab4.5_0004883g0020 Nicotiana tabacum
Nn1g01906 Nelumbo nucifera
Nn6g34660 Nelumbo nucifera
Nn7g36074 Nelumbo nucifera
Oeu034893.1 Olea europaea
Os02g0717400 Oryza sativa ssp. japonica
Peaxi162Scf00058g00215 Petunia axillaris
PGR044G0248 Punica granatum
PGSC0003DMG400025257 Solanum tuberosum
Phvul.005G037000 Phaseolus vulgaris
Potri.001G271200 Populus trichocarpa
Potri.009G065300 Populus trichocarpa
Pp3c16_5830 Physcomitrium patens
Pp3c5_14160 Physcomitrium patens
Pp3c5_14180 Physcomitrium patens
Prupe.2G007800 Prunus persica
Psat1g032800 Pisum sativum
Psat5g207160 Pisum sativum
PSO339G0158 Papaver somniferum
PSO384G0358 Papaver somniferum
QL04p003614 Quercus lobata
QL04p003768 Quercus lobata
QL04p003812 Quercus lobata
QL04p003920 Quercus lobata
QL04p004288 Quercus lobata
QL04p004391 Quercus lobata
QL04p004437 Quercus lobata
QL93p0073_0296 Quercus lobata
RcHm_v2.0_Chr4g0410621 Rosa chinensis
Rhsim07G0053800 Rhododendron simsii
Sabra09G0048500 Salix brachista
Sabra16G0166600 Salix brachista
SalBow4G2031 Salvia bowleyana
Sc11g0009360 Simmondsia chinensis
Sed0001465 Sechium edule
Sed0009971 Sechium edule
SEGI_10833 Sequoiadendron giganteum
SEGI_32023 Sequoiadendron giganteum
SEGI_41309 Sequoiadendron giganteum
SGA_v2.0_scaffold260G45866 Striga asiatica
SGA_v2.0_scaffold5G03126 Striga asiatica
SGA_v2.0_scaffold66G22257 Striga asiatica
SGA_v2.0_scaffold66G22383 Striga asiatica
SHI28919 Sapria himalayana
SHI28920 Sapria himalayana
SHI28921 Sapria himalayana
SHI28922 Sapria himalayana
SMO141G0154 Selaginella moellendorffii
Solyc01g086750.4 Solanum lycopersicum
Sopen01g033750 Solanum pennellii
Sp5g10140 Schrenkiella parvula
TAR369G0496 Trochodendron aralioides
THA.LOC104801983 Tarenaya hassleriana
Thecc.01G414600 Theobroma cacao
Thhalv10010065m.g Eutrema salsugineum
TPR.G12134 Trifolium pratense
TPR.G12253 Trifolium pratense
TPR.G20345 Trifolium pratense
TPR.G26308 Trifolium pratense
TWI53G1897 Tripterygium wilfordii
TWI73G0659 Tripterygium wilfordii
unitig_0.g1375 Utricularia gibba
unitig_0.g1376 Utricularia gibba
unitig_61.g26447 Utricularia gibba
vmacro13647 Vaccinium macrocarpon
vmacro13648 Vaccinium macrocarpon
VMungo1080G1621 Vigna mungo
VMungo1215G1265 Vigna mungo
Zm00001eb083560 Zea mays
Zm00001eb130170 Zea mays
Zm00001eb189030 Zea mays
Zm00001eb252790 Zea mays
Zm00001eb346130 Zea mays
Zm00001eb391970 Zea mays
Zm00001eb411510 Zea mays
Zm00001eb420320 Zea mays

User provided reference genes

Program Settings