Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p20920 Brassica napus
A02p20930 Brassica napus
A06p17210 Brassica napus
A07p28340 Brassica napus
Aa31LG4G6890 Aethionema arabicum
Aa31LG7G5260 Aethionema arabicum
Aa31LG7G5310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5035 Anthoceros agrestis
Actinidia01153 Actinidia chinensis
Actinidia10649 Actinidia chinensis
Actinidia29525 Actinidia chinensis
Ah.05g167890 Amaranthus hybridus
AL1G34230 Arabidopsis lyrata
AL2G36970 Arabidopsis lyrata
Aqoxy5G02100 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2W1LLW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8KD3C5 Arachis hypogaea
AT1G21170 Arabidopsis thaliana
AT1G76850 Arabidopsis thaliana
ATR0772G136 Amborella trichopoda
Atru.chr13.2145 Acer truncatum
AUR62013575 Chenopodium quinoa
AUR62026715 Chenopodium quinoa
BcaB02g07077 Brassica carinata
BcaB02g07120 Brassica carinata
BcaC03g15706 Brassica carinata
BcaC05g26024 Brassica carinata
BcaC08g45509 Brassica carinata
BolC2t09427H Brassica oleracea
BolC5t30688H Brassica oleracea
BolC6t38307H Brassica oleracea
BraA02t07124Z Brassica rapa
BraA07t30471Z Brassica rapa
C02p34110 Brassica napus
C05p19910 Brassica napus
C06p31780 Brassica napus
CAN.G268.10 Capsicum annuum
CAN.G89.17 Capsicum annuum
CANSAT25G1176 Cannabis sativa
CARHR021630 Cardamine hirsuta
CARHR070360 Cardamine hirsuta
Carub.0001s2061 Capsella rubella
Carub.0002s2373 Capsella rubella
Ca_10620_v3 Cicer arietinum L.
Cc10_g14750 Coffea canephora
CDE06G1552 Ceratophyllum demersum
CDE08G0217 Ceratophyllum demersum
Cfa013845 Carpinus fangiana
Ciclev10000108m.g Citrus clementina
CiPaw.07G160100 Carya illinoinensis
ClCG09G010020 Citrullus lanatus
COL.COLO4_33551 Corchorus olitorius
COL.COLO4_35826 Corchorus olitorius
COL.COLO4_37835 Corchorus olitorius
COL.COLO4_37836 Corchorus olitorius
Cpa.g.sc21.193 Carica papaya
Cre16.g684600 Chlamydomonas reinhardtii
CsaV3_7G024680 Cucumis sativus L.
CSS0021982 Camellia sinensis var. sinensis
DCAR_014431 Daucus carota
Dinv25854 Davidia involucrata
Dinv41091 Davidia involucrata
Duzib116G0402 Durio zibethinus
ECA236G0544 Erigeron canadensis
ECA247G2571 Erigeron canadensis
EL10Ac1g01536 Beta vulgaris
Eucgr.F04242 Eucalyptus grandis
FAN01G0918 Fragaria x ananassa
FAN03G2156 Fragaria x ananassa
FAN06G2696 Fragaria x ananassa
FAN10G0990 Fragaria x ananassa
FAN10G3104 Fragaria x ananassa
FvH4_7g05280 Fragaria vesca
Glyma.10G217200 Glycine max
Glyma.20G174900 Glycine max
Gohir.A02G064300 Gossypium hirsutum
Gohir.D02G070200 Gossypium hirsutum
Gorai.005G079300 Gossypium raimondii
GSVIVG01034519001 Vitis vinifera
HanXRQChr02g0045411 Helianthus annuus
HanXRQChr06g0174441 Helianthus annuus
HanXRQChr11g0339321 Helianthus annuus
Haze_22519 Corylus avellana
Hma1.2p1_0105F.1_g050770 Hydrangea macrophylla
HPP92_016941 Vanilla planifolia
Hund26699 Selenicereus undatus
Lalb_Chr02g0141781 Lupinus albus
Lalb_Chr06g0162011 Lupinus albus
Lalb_Chr06g0162031 Lupinus albus
Lalb_Chr21g0305741 Lupinus albus
Lj5g0007913 Lotus japonicus
Lj7C372G9 Lonicera japonica
Lsat_1_v5_gn_7_71861 Lactuca sativa
Manes.02G178800 Manihot esculenta
Mapoly0098s0037 Marchantia polymorpha
MBI02_g15889_MAGBIO Magnolia biondii
MBI09_g18624_MAGBIO Magnolia biondii
MBI09_g18626_MAGBIO Magnolia biondii
MBI09_g20113_MAGBIO Magnolia biondii
MBI09_g45353_MAGBIO Magnolia biondii
MBI09_g47603_MAGBIO Magnolia biondii
MBI17_g19402_MAGBIO Magnolia biondii
MBI17_g21001_MAGBIO Magnolia biondii
MBI17_g42470_MAGBIO Magnolia biondii
MD02G1241200 Malus domestica
MD02G1241400 Malus domestica
MD07G1075500 Malus domestica
Medtr1g096550 Medicago truncatula
Medtr3g008090 Medicago truncatula
MELO3C024093.2 Cucumis melo
Migut.N03225 Erythranthe guttata
MSTRG.22372 Avicennia marina
Nitab4.5_0000140g0050 Nicotiana tabacum
Nitab4.5_0005705g0020 Nicotiana tabacum
Nitab4.5_0005926g0010 Nicotiana tabacum
Nitab4.5_0008106g0010 Nicotiana tabacum
Nitab4.5_0008106g0020 Nicotiana tabacum
Nn1g00073 Nelumbo nucifera
Nn1g06100 Nelumbo nucifera
Nn5g28722 Nelumbo nucifera
Oeu011939.2 Olea europaea
Oeu014495.2 Olea europaea
Os04g0421900 Oryza sativa ssp. japonica
Peaxi162Scf00765g00049 Petunia axillaris
Peaxi162Scf01294g00125 Petunia axillaris
PGR042G2936 Punica granatum
PGSC0003DMG400010789 Solanum tuberosum
PGSC0003DMG400024108 Solanum tuberosum
Phvul.007G088900 Phaseolus vulgaris
Potri.002G068900 Populus trichocarpa
Potri.005G191500 Populus trichocarpa
Pp3c11_13110 Physcomitrium patens
Pp3c1_7430 Physcomitrium patens
Pp3c24_1100 Physcomitrium patens
Pp3c5_4060 Physcomitrium patens
Prupe.8G058700 Prunus persica
Psat6g186720 Pisum sativum
PSO210G4735 Papaver somniferum
PSO238G0028 Papaver somniferum
QL02p033637 Quercus lobata
RcHm_v2.0_Chr1g0332001 Rosa chinensis
Rhsim08G0021800 Rhododendron simsii
Rhsim10G0066500 Rhododendron simsii
Sabra02G0054200 Salix brachista
Sabra05G0146300 Salix brachista
SalBow6G6910 Salvia bowleyana
Sc02g0004140 Simmondsia chinensis
Sed0009622 Sechium edule
SEGI_05372 Sequoiadendron giganteum
SEGI_16189 Sequoiadendron giganteum
SEGI_20180 Sequoiadendron giganteum
SEGI_34715 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08667 Striga asiatica
SGA_v2.0_scaffold25G11172 Striga asiatica
SHI18207 Sapria himalayana
SMO118G0055 Selaginella moellendorffii
Solyc04g071350.3 Solanum lycopersicum
Solyc12g056520.3 Solanum lycopersicum
Sopen04g027310 Solanum pennellii
Sopen12g029110 Solanum pennellii
Sopen12g029120 Solanum pennellii
Sp1g18810 Schrenkiella parvula
Sp5g31980 Schrenkiella parvula
TAR376G0660 Trochodendron aralioides
TAR628G0150 Trochodendron aralioides
THA.LOC104812038 Tarenaya hassleriana
Thecc.08G150000 Theobroma cacao
Thhalv10006745m.g Eutrema salsugineum
Thhalv10018046m.g Eutrema salsugineum
TPR.G8817 Trifolium pratense
TWI34G0668 Tripterygium wilfordii
TWI60G1418 Tripterygium wilfordii
unitig_744.g24568 Utricularia gibba
vmacro18508 Vaccinium macrocarpon
VMungo0647G1536 Vigna mungo
VMungo0720G3010 Vigna mungo
Zm00001eb002970 Zea mays
Zm00001eb083200 Zea mays
Zm00001eb092050 Zea mays
Zm00001eb116630 Zea mays
Zm00001eb119180 Zea mays
Zm00001eb125110 Zea mays
Zm00001eb179990 Zea mays
Zm00001eb184190 Zea mays
Zm00001eb201500 Zea mays
Zm00001eb269890 Zea mays
Zm00001eb342060 Zea mays
Zm00001eb422350 Zea mays

User provided reference genes

Program Settings