Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15220 Brassica napus
A07p31910 Brassica napus
A07p35030 Brassica napus
A10p23270 Brassica napus
Aa31LG11G13820 Aethionema arabicum
Aa31sc179G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2845 Anthoceros agrestis
Actinidia16637 Actinidia chinensis
Actinidia36314 Actinidia chinensis
Ah.10g037610 Amaranthus hybridus
Ah.16g101870 Amaranthus hybridus
AL2G27500 Arabidopsis lyrata
AL6G26600 Arabidopsis lyrata
Aqoxy3G00334 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BF2R1L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z01VGZ Arachis hypogaea
AT1G68590 Arabidopsis thaliana
AT5G15760 Arabidopsis thaliana
ATR0564G434 Amborella trichopoda
Atru.chr11.1298 Acer truncatum
AUR62008980 Chenopodium quinoa
AUR62014523 Chenopodium quinoa
BcaB03g15432 Brassica carinata
BcaB03g15836 Brassica carinata
BcaC03g14972 Brassica carinata
BcaC04g18940 Brassica carinata
BcaC08g45951 Brassica carinata
BcaC08g45954 Brassica carinata
BcaC08g46310 Brassica carinata
BolC2t08587H Brassica oleracea
BolC6t38850H Brassica oleracea
BolC6t39301H Brassica oleracea
BolC9t58975H Brassica oleracea
BraA02t06585Z Brassica rapa
BraA07t30819Z Brassica rapa
BraA10t44395Z Brassica rapa
C02p25030 Brassica napus
C06p37480 Brassica napus
C09p61340 Brassica napus
CAN.G995.4 Capsicum annuum
CANSAT64G0461 Cannabis sativa
CARHR061390 Cardamine hirsuta
CARHR197570 Cardamine hirsuta
Carub.0002s1513 Capsella rubella
Carub.0006s1391 Capsella rubella
Ca_25588_v3 Cicer arietinum L.
Cc07_g08870 Coffea canephora
Cc11_g10360 Coffea canephora
CDE05G0272 Ceratophyllum demersum
Ciclev10012871m.g Citrus clementina
Ciclev10032902m.g Citrus clementina
CiPaw.04G041300 Carya illinoinensis
ClCG05G011680 Citrullus lanatus
COL.COLO4_05466 Corchorus olitorius
COL.COLO4_07898 Corchorus olitorius
Cpa.g.sc1.192 Carica papaya
Cpa.g.sc179.3 Carica papaya
Cre02.g083950 Chlamydomonas reinhardtii
CsaV3_3G020570 Cucumis sativus L.
CSS0003555 Camellia sinensis var. sinensis
CSS0025981 Camellia sinensis var. sinensis
CSS0032363 Camellia sinensis var. sinensis
CSS0044113 Camellia sinensis var. sinensis
DCAR_017204 Daucus carota
DCAR_026724 Daucus carota
Dinv21111 Davidia involucrata
Dinv33936 Davidia involucrata
Duzib248G1227 Durio zibethinus
Duzib268G1185 Durio zibethinus
ECA233G1351 Erigeron canadensis
ECA236G0613 Erigeron canadensis
EL10Ac2g04587 Beta vulgaris
Eucgr.J01498 Eucalyptus grandis
FAN02G1916 Fragaria x ananassa
FAN05G5367 Fragaria x ananassa
FAN09G1508 Fragaria x ananassa
FAN14G0605 Fragaria x ananassa
FAN14G5211 Fragaria x ananassa
FvH4_6g45210 Fragaria vesca
Glyma.08G364600 Glycine max
Gohir.A03G097501 Gossypium hirsutum
Gohir.A11G162950 Gossypium hirsutum
Gohir.D02G115700 Gossypium hirsutum
Gohir.D11G169200 Gossypium hirsutum
Gorai.005G138300 Gossypium raimondii
Gorai.007G180900 Gossypium raimondii
GSVIVG01011921001 Vitis vinifera
GSVIVG01031053001 Vitis vinifera
HanXRQChr08g0214241 Helianthus annuus
HanXRQChr12g0376481 Helianthus annuus
Hma1.2p1_0136F.1_g062190 Hydrangea macrophylla
Hma1.2p1_0406F.1_g146130 Hydrangea macrophylla
Hma1.2p1_0550F.1_g177340 Hydrangea macrophylla
Hma1.2p1_0550F.1_g177350 Hydrangea macrophylla
Hma1.2p1_3581F.1_g336843 Hydrangea macrophylla
Hma1.2p1_3581F.1_g336846 Hydrangea macrophylla
HPP92_006143 Vanilla planifolia
Hund16136 Selenicereus undatus
Lalb_Chr17g0335771 Lupinus albus
Lj1g0016347 Lotus japonicus
Lj1g0025351 Lotus japonicus
Lj3P1017T47 Lonicera japonica
Lj4P194T26 Lonicera japonica
Lsat_1_v5_gn_3_38140 Lactuca sativa
Lsat_1_v5_gn_9_32940 Lactuca sativa
Manes.01G109300 Manihot esculenta
Manes.06G070400 Manihot esculenta
Manes.14G099900 Manihot esculenta
Mapoly0026s0019 Marchantia polymorpha
MBI07_g40356_MAGBIO Magnolia biondii
MBI12_g41871_MAGBIO Magnolia biondii
MD09G1087300 Malus domestica
MD17G1075600 Malus domestica
MD17G1076100 Malus domestica
Medtr6g090520 Medicago truncatula
MELO3C023788.2 Cucumis melo
Migut.B00118 Erythranthe guttata
Migut.E00323 Erythranthe guttata
MSTRG.16882 Avicennia marina
MSTRG.823 Avicennia marina
Nitab4.5_0001569g0080 Nicotiana tabacum
Nitab4.5_0002207g0110 Nicotiana tabacum
Nitab4.5_0002489g0040 Nicotiana tabacum
Nitab4.5_0003823g0030 Nicotiana tabacum
Nitab4.5_0004895g0090 Nicotiana tabacum
Nitab4.5_0005199g0020 Nicotiana tabacum
Nn3g17798 Nelumbo nucifera
Nn4g23801 Nelumbo nucifera
Oeu003405.1 Olea europaea
Oeu036198.1 Olea europaea
Oeu050369.1 Olea europaea
Os04g0461100 Oryza sativa ssp. japonica
Peaxi162Scf00104g00811 Petunia axillaris
Peaxi162Scf00382g00119 Petunia axillaris
Peaxi162Scf00814g00229 Petunia axillaris
PGR042G0665 Punica granatum
PGSC0003DMG400019583 Solanum tuberosum
PGSC0003DMG401012965 Solanum tuberosum
Phvul.008G005100 Phaseolus vulgaris
Potri.004G101000 Populus trichocarpa
Potri.008G118700 Populus trichocarpa
Potri.010G127300 Populus trichocarpa
Pp3c16_2540 Physcomitrium patens
Pp3c6_19070 Physcomitrium patens
Prupe.3G238100 Prunus persica
Psat1g046480 Pisum sativum
PSO017G5162 Papaver somniferum
PSO478G1471 Papaver somniferum
QL01p043998 Quercus lobata
QL02p051926 Quercus lobata
RcHm_v2.0_Chr2g0162921 Rosa chinensis
Rhsim09G0110100 Rhododendron simsii
Sabra04G0079100 Salix brachista
Sabra08G0090100 Salix brachista
Sabra10G0096700 Salix brachista
SalBow6G4895 Salvia bowleyana
SalBow8G5571 Salvia bowleyana
Sc10g0001240 Simmondsia chinensis
Sed0001957 Sechium edule
Sed0015390 Sechium edule
SEGI_30525 Sequoiadendron giganteum
SGA_v2.0_scaffold170G38750 Striga asiatica
SGA_v2.0_scaffold32G13263 Striga asiatica
SMO361G0307 Selaginella moellendorffii
Solyc03g034190.3 Solanum lycopersicum
Solyc05g009570.3 Solanum lycopersicum
Sopen03g006970 Solanum pennellii
Sopen05g005380 Solanum pennellii
Sp5g23700 Schrenkiella parvula
Sp6g28360 Schrenkiella parvula
TAR371G0244 Trochodendron aralioides
TAR629G0906 Trochodendron aralioides
THA.LOC104820978 Tarenaya hassleriana
THA.LOC104821946 Tarenaya hassleriana
Thecc.02G357900 Theobroma cacao
Thecc.04G135800 Theobroma cacao
Thhalv10002962m.g Eutrema salsugineum
Thhalv10014781m.g Eutrema salsugineum
Thhalv10019225m.g Eutrema salsugineum
TPR.G33541 Trifolium pratense
TWI74G1467 Tripterygium wilfordii
unitig_21.g20820 Utricularia gibba
unitig_22.g6874 Utricularia gibba
vmacro05565 Vaccinium macrocarpon
vmacro10545 Vaccinium macrocarpon
VMungo1383G0010 Vigna mungo
Zm00001eb080680 Zea mays
Zm00001eb424280 Zea mays

User provided reference genes

Program Settings