Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p00170 Brassica napus
Aa31LG9G17910 Aethionema arabicum
Actinidia15262 Actinidia chinensis
Actinidia27942 Actinidia chinensis
Ah.11g043410 Amaranthus hybridus
AL7G45140 Arabidopsis lyrata
Aqoxy6G01418 Aquilegia oxysepala
Aqoxy6G01419 Aquilegia oxysepala
Aqoxy6G01420 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DEGU9R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HN34MD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HRI1KU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VT20D2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W6GX7N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y23KDA Arachis hypogaea
AT5G36210 Arabidopsis thaliana
ATR0097G003 Amborella trichopoda
ATR0097G016 Amborella trichopoda
Atru.chr13.624 Acer truncatum
AUR62022463 Chenopodium quinoa
AUR62040061 Chenopodium quinoa
BolC3t21632H Brassica oleracea
BraA08t32073Z Brassica rapa
C03p93340 Brassica napus
CAN.G1288.14 Capsicum annuum
CAN.G57.16 Capsicum annuum
CAN.G57.17 Capsicum annuum
CANSAT25G2609 Cannabis sativa
CARHR216560 Cardamine hirsuta
Carub.0007s3188 Capsella rubella
Ca_05516_v3 Cicer arietinum L.
CBR_g23970 Chara braunii
Cc10_g03890 Coffea canephora
Cc10_g03900 Coffea canephora
CDE06G0513 Ceratophyllum demersum
Cfa018505 Carpinus fangiana
Ciclev10003676m.g Citrus clementina
CiPaw.15G063700 Carya illinoinensis
ClCG05G019590 Citrullus lanatus
COL.COLO4_26452 Corchorus olitorius
Cpa.g.c26337.1 Carica papaya
Cre10.g423300 Chlamydomonas reinhardtii
CsaV3_4G034060 Cucumis sativus L.
CsaV3_4G034070 Cucumis sativus L.
CsaV3_4G034080 Cucumis sativus L.
CSS0002070 Camellia sinensis var. sinensis
CSS0007643 Camellia sinensis var. sinensis
CSS0021204 Camellia sinensis var. sinensis
DCAR_003620 Daucus carota
DCAR_008786 Daucus carota
DCAR_023532 Daucus carota
Dinv35989 Davidia involucrata
Dinv36000 Davidia involucrata
Dinv42129 Davidia involucrata
Duzib116G0360 Durio zibethinus
ECA233G1971 Erigeron canadensis
ECA248G1217 Erigeron canadensis
EL10Ac1g01808 Beta vulgaris
Eucgr.F00025 Eucalyptus grandis
Eucgr.F00026 Eucalyptus grandis
Eucgr.F00027 Eucalyptus grandis
Eucgr.F00028 Eucalyptus grandis
Eucgr.L02208 Eucalyptus grandis
Eucgr.L03025 Eucalyptus grandis
FAN15G0079 Fragaria x ananassa
FAN15G1851 Fragaria x ananassa
FAN20G0705 Fragaria x ananassa
FAN20G3001 Fragaria x ananassa
FAN27G1383 Fragaria x ananassa
FAN27G2115 Fragaria x ananassa
FvH4_2g34941 Fragaria vesca
FvH4_2g34950 Fragaria vesca
Glyma.08G315400 Glycine max
Glyma.18G098400 Glycine max
Gohir.A06G016100 Gossypium hirsutum
Gohir.D06G014300 Gossypium hirsutum
Gorai.010G016900 Gossypium raimondii
GSVIVG01009564001 Vitis vinifera
GSVIVG01009565001 Vitis vinifera
GSVIVG01034289001 Vitis vinifera
GSVIVG01038759001 Vitis vinifera
HanXRQChr11g0349531 Helianthus annuus
HanXRQChr11g0349621 Helianthus annuus
HanXRQChr11g0349761 Helianthus annuus
HanXRQChr13g0399111 Helianthus annuus
Haze_17571 Corylus avellana
Hma1.2p1_0260F.1_g104710 Hydrangea macrophylla
Hma1.2p1_1543F.1_g289760 Hydrangea macrophylla
HPP92_004236 Vanilla planifolia
HPP92_004258 Vanilla planifolia
Hund26615 Selenicereus undatus
Lalb_Chr18g0049301 Lupinus albus
Lj4A50T39 Lonicera japonica
Lj4C50T5 Lonicera japonica
Lj6g0027326 Lotus japonicus
Lj9A359T75 Lonicera japonica
Lsat_1_v5_gn_1_54780 Lactuca sativa
Lsat_1_v5_gn_6_33061 Lactuca sativa
Manes.18G034500 Manihot esculenta
Mapoly0002s0297 Marchantia polymorpha
MBI02_g21206_MAGBIO Magnolia biondii
MD08G1107000 Malus domestica
MD08G1107100 Malus domestica
MD08G1107200 Malus domestica
MD15G1087700 Malus domestica
MD15G1087800 Malus domestica
Medtr3g051310 Medicago truncatula
MELO3C016729.2 Cucumis melo
MELO3C016731.2 Cucumis melo
Migut.C00608 Erythranthe guttata
MSTRG.25109 Avicennia marina
Nitab4.5_0000876g0160 Nicotiana tabacum
Nitab4.5_0002673g0070 Nicotiana tabacum
Nitab4.5_0003438g0010 Nicotiana tabacum
Nitab4.5_0003649g0040 Nicotiana tabacum
Nitab4.5_0004930g0010 Nicotiana tabacum
Nitab4.5_0028870g0010 Nicotiana tabacum
Nn5g30184 Nelumbo nucifera
Oeu032239.1 Olea europaea
Os06g0215300 Oryza sativa ssp. japonica
Os06g0215400 Oryza sativa ssp. japonica
Peaxi162Scf00003g01723 Petunia axillaris
Peaxi162Scf00929g00519 Petunia axillaris
PGR083G1228 Punica granatum
PGSC0003DMG400008244 Solanum tuberosum
Phvul.006G042600 Phaseolus vulgaris
Phvul.006G042700 Phaseolus vulgaris
Potri.002G128700 Populus trichocarpa
Pp3c1_10400 Physcomitrium patens
Pp3c1_7820 Physcomitrium patens
PRCOL_00005577 Prasinoderma coloniale
Prupe.1G441400 Prunus persica
Prupe.1G441500 Prunus persica
Psat4g195440 Pisum sativum
Psat5g145000 Pisum sativum
Psat5g180320 Pisum sativum
PSO170G1173 Papaver somniferum
PSO541G5638 Papaver somniferum
PSO675G3178 Papaver somniferum
PSO675G3306 Papaver somniferum
PSO675G3373 Papaver somniferum
PSO675G9051 Papaver somniferum
QL02p006064 Quercus lobata
RcHm_v2.0_Chr6g0307051 Rosa chinensis
Rhsim06G0046300 Rhododendron simsii
Sabra02G0100800 Salix brachista
SalBow7G2172 Salvia bowleyana
SalBow7G2818 Salvia bowleyana
Sc02g0006850 Simmondsia chinensis
Sc08g0000060 Simmondsia chinensis
Sc08g0000070 Simmondsia chinensis
Sc08g0000080 Simmondsia chinensis
Sed0005929 Sechium edule
Sed0014453 Sechium edule
SEGI_00299 Sequoiadendron giganteum
SEGI_00433 Sequoiadendron giganteum
SEGI_11952 Sequoiadendron giganteum
SEGI_16824 Sequoiadendron giganteum
SEGI_18104 Sequoiadendron giganteum
SEGI_19056 Sequoiadendron giganteum
SEGI_23875 Sequoiadendron giganteum
SEGI_38131 Sequoiadendron giganteum
SGA_v2.0_scaffold217G42435 Striga asiatica
SHI08311 Sapria himalayana
SMO226G0004 Selaginella moellendorffii
SMO361G0168 Selaginella moellendorffii
SMO361G0429 Selaginella moellendorffii
Solyc04g049630.3 Solanum lycopersicum
Solyc10g050840.3 Solanum lycopersicum
Sopen04g019770 Solanum pennellii
Sopen10g022400 Solanum pennellii
Sp7g05960 Schrenkiella parvula
TAR381G1600 Trochodendron aralioides
THA.LOC104821889 Tarenaya hassleriana
THA.LOC104823807 Tarenaya hassleriana
Thecc.08G013900 Theobroma cacao
Thhalv10003712m.g Eutrema salsugineum
TPR.G16593 Trifolium pratense
TWI56G0590 Tripterygium wilfordii
TWI56G1470 Tripterygium wilfordii
vmacro19485 Vaccinium macrocarpon
vmacro21559 Vaccinium macrocarpon
vmacro21560 Vaccinium macrocarpon
vmacro21563 Vaccinium macrocarpon
VMungo0540G0248 Vigna mungo
VMungo0540G2323 Vigna mungo
Zm00001eb260330 Zea mays
Zm00001eb373040 Zea mays
Zm00001eb373080 Zea mays

User provided reference genes

Program Settings