Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07630 Brassica napus
A02p08110 Brassica napus
A03p12490 Brassica napus
A03p60150 Brassica napus
A10p15270 Brassica napus
Aa31LG2G19870 Aethionema arabicum
Aa31LG3G13740 Aethionema arabicum
Actinidia01426 Actinidia chinensis
Actinidia24379 Actinidia chinensis
Actinidia38317 Actinidia chinensis
Actinidia38668 Actinidia chinensis
AL7G21510 Arabidopsis lyrata
AL8G33980 Arabidopsis lyrata
Aqoxy7G03381 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea
AT4G30630 Arabidopsis thaliana
AT5G57910 Arabidopsis thaliana
ATR0580G180 Amborella trichopoda
Atru.chr7.24 Acer truncatum
BcaB01g04466 Brassica carinata
BcaB05g22385 Brassica carinata
BcaB05g22386 Brassica carinata
BcaC09g51852 Brassica carinata
BcaNung00572 Brassica carinata
BcaNung02973 Brassica carinata
BcaNung04561 Brassica carinata
BolC1t00818H Brassica oleracea
BolC2t07494H Brassica oleracea
BolC3t13911H Brassica oleracea
BolC7t46265H Brassica oleracea
BolC9t57829H Brassica oleracea
BraA01t00706Z Brassica rapa
BraA02t05884Z Brassica rapa
BraA03t10564Z Brassica rapa
BraA03t15060Z Brassica rapa
BraA10t43608Z Brassica rapa
C01p08320 Brassica napus
C02p13760 Brassica napus
C03p14700 Brassica napus
C09p49780 Brassica napus
CAN.G160.50 Capsicum annuum
CAN.G551.47 Capsicum annuum
CANSAT11G0712 Cannabis sativa
CARHR238510 Cardamine hirsuta
CARHR271690 Cardamine hirsuta
Carub.0007s0993 Capsella rubella
Carub.0008s1844 Capsella rubella
Ca_21134_v3 Cicer arietinum L.
Ca_21136_v3 Cicer arietinum L.
Cc06_g14820 Coffea canephora
CDE02G3703 Ceratophyllum demersum
CDE05G3257 Ceratophyllum demersum
Cfa020811 Carpinus fangiana
Ciclev10009224m.g Citrus clementina
CiPaw.15G166900 Carya illinoinensis
CiPaw.16G108400 Carya illinoinensis
ClCG02G014430 Citrullus lanatus
ClCG06G012480 Citrullus lanatus
COL.COLO4_18822 Corchorus olitorius
Cpa.g.sc46.168 Carica papaya
CsaV3_1G029030 Cucumis sativus L.
CsaV3_1G029050 Cucumis sativus L.
CsaV3_2G007570 Cucumis sativus L.
CSS0036931 Camellia sinensis var. sinensis
DCAR_014806 Daucus carota
Dinv41365 Davidia involucrata
Dinv41366 Davidia involucrata
Dinv42845 Davidia involucrata
Dinv43255 Davidia involucrata
Duzib150G1598 Durio zibethinus
Duzib168G1894 Durio zibethinus
ECA234G4063 Erigeron canadensis
ECA240G4545 Erigeron canadensis
Eucgr.C00252 Eucalyptus grandis
FAN23G1979 Fragaria x ananassa
FAN28G1366 Fragaria x ananassa
FvH4_1g00810 Fragaria vesca
Glyma.02G204900 Glycine max
Glyma.17G073100 Glycine max
Gohir.A05G052900 Gossypium hirsutum
Gohir.A07G027400 Gossypium hirsutum
Gohir.A08G252100 Gossypium hirsutum
Gohir.D05G054500 Gossypium hirsutum
Gohir.D07G031400 Gossypium hirsutum
Gohir.D08G273700 Gossypium hirsutum
Gorai.001G032800 Gossypium raimondii
Gorai.004G292200 Gossypium raimondii
Gorai.009G056200 Gossypium raimondii
Gorai.013G142000 Gossypium raimondii
GSVIVG01023625001 Vitis vinifera
HanXRQChr01g0015421 Helianthus annuus
HanXRQChr02g0053911 Helianthus annuus
HanXRQChr03g0065561 Helianthus annuus
HanXRQChr05g0143061 Helianthus annuus
HanXRQChr09g0244571 Helianthus annuus
HanXRQChr09g0244591 Helianthus annuus
HanXRQChr10g0313651 Helianthus annuus
HanXRQChr12g0357671 Helianthus annuus
HanXRQChr13g0391321 Helianthus annuus
HanXRQChr16g0511321 Helianthus annuus
Haze_19170 Corylus avellana
Hma1.2p1_0222F.1_g093653 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093656 Hydrangea macrophylla
Hma1.2p1_2680F.1_g326800 Hydrangea macrophylla
Hma1.2p1_2680F.1_g326810 Hydrangea macrophylla
HPP92_010327 Vanilla planifolia
HPP92_010344 Vanilla planifolia
HPP92_018342 Vanilla planifolia
Lalb_Chr08g0234281 Lupinus albus
Lalb_Chr12g0198751 Lupinus albus
Lalb_Chr13g0300821 Lupinus albus
Lj4g0026574 Lotus japonicus
Lj6g0003054 Lotus japonicus
Lsat_1_v5_gn_1_87560 Lactuca sativa
Lsat_1_v5_gn_5_90100 Lactuca sativa
Lsat_1_v5_gn_7_50020 Lactuca sativa
Manes.06G035500 Manihot esculenta
MBI15_g18234_MAGBIO Magnolia biondii
MD02G1006500 Malus domestica
MD15G1151500 Malus domestica
Medtr4g130700 Medicago truncatula
MELO3C004129.2 Cucumis melo
MELO3C010213.2 Cucumis melo
Migut.J01364 Erythranthe guttata
Migut.K00316 Erythranthe guttata
MSTRG.6151 Avicennia marina
Nitab4.5_0001571g0070 Nicotiana tabacum
Nitab4.5_0002891g0100 Nicotiana tabacum
Nitab4.5_0005869g0060 Nicotiana tabacum
Nitab4.5_0008875g0010 Nicotiana tabacum
Nn8g39944 Nelumbo nucifera
Oeu021304.1 Olea europaea
Oeu026461.3 Olea europaea
Oeu028997.1 Olea europaea
Os08g0270800 Oryza sativa ssp. japonica
Peaxi162Scf00062g00131 Petunia axillaris
Peaxi162Scf00401g00425 Petunia axillaris
PGR102G0437 Punica granatum
PGSC0003DMG400007832 Solanum tuberosum
PGSC0003DMG400011142 Solanum tuberosum
Phvul.003G155300 Phaseolus vulgaris
Phvul.009G204700 Phaseolus vulgaris
Potri.006G183000 Populus trichocarpa
Potri.018G105300 Populus trichocarpa
Prupe.7G264400 Prunus persica
Psat4g009880 Pisum sativum
PSO339G1361 Papaver somniferum
PSO384G1085 Papaver somniferum
QL02p093514 Quercus lobata
RcHm_v2.0_Chr2g0085521 Rosa chinensis
Rhsim01G0028200 Rhododendron simsii
Rhsim03G0257600 Rhododendron simsii
Sabra06G0139200 Salix brachista
Sabra18G0089900 Salix brachista
SalBow1G3284 Salvia bowleyana
SalBow1G6739 Salvia bowleyana
Sed0003883 Sechium edule
Sed0021485 Sechium edule
Sed0022175 Sechium edule
SGA_v2.0_scaffold265G46100 Striga asiatica
SGA_v2.0_scaffold45G17024 Striga asiatica
SHI18549 Sapria himalayana
Solyc07g005690.3 Solanum lycopersicum
Solyc12g009970.2 Solanum lycopersicum
Sopen07g001800 Solanum pennellii
Sopen12g004840 Solanum pennellii
Sp6g19580 Schrenkiella parvula
Sp7g28510 Schrenkiella parvula
TAR383G0583 Trochodendron aralioides
TAR625G0365 Trochodendron aralioides
THA.LOC104803918 Tarenaya hassleriana
THA.LOC104813538 Tarenaya hassleriana
THA.LOC104819991 Tarenaya hassleriana
Thecc.09G028600 Theobroma cacao
Thhalv10014665m.g Eutrema salsugineum
Thhalv10026294m.g Eutrema salsugineum
TPR.G24855 Trifolium pratense
TWI32G1309 Tripterygium wilfordii
TWI34G0689 Tripterygium wilfordii
TWI63G0632 Tripterygium wilfordii
unitig_0.g2686 Utricularia gibba
unitig_748.g7198 Utricularia gibba
vmacro06067 Vaccinium macrocarpon
vmacro16796 Vaccinium macrocarpon
VMungo1215G0492 Vigna mungo
VMungo1309G0866 Vigna mungo
Zm00001eb177820 Zea mays
Zm00001eb412280 Zea mays

User provided reference genes

Program Settings