Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p09410 Brassica napus
Aa31LG2G14140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.333 Anthoceros agrestis
Actinidia14775 Actinidia chinensis
Actinidia18138 Actinidia chinensis
Actinidia24579 Actinidia chinensis
Actinidia27146 Actinidia chinensis
Actinidia27147 Actinidia chinensis
Actinidia29282 Actinidia chinensis
Actinidia29283 Actinidia chinensis
Ah.12g055580 Amaranthus hybridus
AL1G46000 Arabidopsis lyrata
Aqoxy2G01071 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0FP5K8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.17A2E3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2S5V57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3409IM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3AYS16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4I5WJB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.52KVEJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.77ELBP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.880EI2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8HI23N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A68QNY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CC8XZU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CS76E6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DG0EBB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GXU96K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4GW9A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IVLN14 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J43AB2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KD6WCB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L2A86Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MJT8A2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N17FYW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NF31AE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QAQC1M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QVG73I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RVVF1M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJMB8X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9HF71 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VUN7IK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X13QWB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X8J4LN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YZ31UQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZE4DKJ Arachis hypogaea
AT1G31910 Arabidopsis thaliana
ATR0796G169 Amborella trichopoda
Atru.chr6.1539 Acer truncatum
Atru.chr7.1538 Acer truncatum
AUR62007367 Chenopodium quinoa
AUR62018622 Chenopodium quinoa
BcaB03g13780 Brassica carinata
BcaB04g17900 Brassica carinata
BcaB04g18004 Brassica carinata
BcaC07g37640 Brassica carinata
BolC8t48013H Brassica oleracea
BraA08t32940Z Brassica rapa
CAN.G129.30 Capsicum annuum
CAN.G474.24 Capsicum annuum
CAN.G773.27 Capsicum annuum
CANSAT21G2152 Cannabis sativa
CARHR031250 Cardamine hirsuta
Carub.0001s3023 Capsella rubella
Ca_16694_v3 Cicer arietinum L.
Cc08_g03790 Coffea canephora
Cc08_g04670 Coffea canephora
CDE03G0071 Ceratophyllum demersum
Ciclev10000923m.g Citrus clementina
CiPaw.11G099800 Carya illinoinensis
ClCG09G011560 Citrullus lanatus
ClCG10G001230 Citrullus lanatus
COL.COLO4_16918 Corchorus olitorius
Cpa.g.sc16.4 Carica papaya
CsaV3_3G048780 Cucumis sativus L.
CSS0011945 Camellia sinensis var. sinensis
CSS0018892 Camellia sinensis var. sinensis
CSS0034538 Camellia sinensis var. sinensis
DCAR_004571 Daucus carota
DCAR_004572 Daucus carota
DCAR_004587 Daucus carota
Dinv06917 Davidia involucrata
Dinv29018 Davidia involucrata
Duzib084G0829 Durio zibethinus
Duzib205G2005 Durio zibethinus
ECA240G0026 Erigeron canadensis
ECA246G3990 Erigeron canadensis
EL10Ac5g11993 Beta vulgaris
Eucgr.E01312 Eucalyptus grandis
FAN04G2190 Fragaria x ananassa
FAN08G3577 Fragaria x ananassa
FAN13G0019 Fragaria x ananassa
FAN18G0612 Fragaria x ananassa
FAN18G4458 Fragaria x ananassa
FvH4_5g16120 Fragaria vesca
FvH4_5g23300 Fragaria vesca
Glyma.04G237000 Glycine max
Glyma.06G127200 Glycine max
Gohir.A12G205400 Gossypium hirsutum
Gohir.D12G207800 Gossypium hirsutum
Gorai.008G223300 Gossypium raimondii
GSVIVG01013024001 Vitis vinifera
HanXRQChr03g0082001 Helianthus annuus
HanXRQChr06g0175511 Helianthus annuus
HanXRQChr16g0518911 Helianthus annuus
Haze_08130 Corylus avellana
Hma1.2p1_1645F.1_g295410 Hydrangea macrophylla
HPP92_020877 Vanilla planifolia
HPP92_020889 Vanilla planifolia
Hund11168 Selenicereus undatus
Lalb_Chr11g0066741 Lupinus albus
Lj1g0021072 Lotus japonicus
Lj1g0024878 Lotus japonicus
Lj8C319G15 Lonicera japonica
Lsat_1_v5_gn_0_9341 Lactuca sativa
Lsat_1_v5_gn_6_73200 Lactuca sativa
Manes.08G071412 Manihot esculenta
Mapoly0108s0066 Marchantia polymorpha
MBI16_g31266_MAGBIO Magnolia biondii
MD09G1247700 Malus domestica
MD17G1240600 Malus domestica
Medtr3g091190 Medicago truncatula
MELO3C003445.2 Cucumis melo
Migut.A00606 Erythranthe guttata
Migut.E01323 Erythranthe guttata
MSTRG.1794 Avicennia marina
Nitab4.5_0002897g0020 Nicotiana tabacum
Nitab4.5_0002897g0030 Nicotiana tabacum
Nitab4.5_0011549g0010 Nicotiana tabacum
Nitab4.5_0028488g0010 Nicotiana tabacum
Nn1g01892 Nelumbo nucifera
Oeu023587.1 Olea europaea
Oeu031077.4 Olea europaea
Os03g0253100 Oryza sativa ssp. japonica
Peaxi162Scf00052g00324 Petunia axillaris
Peaxi162Scf00185g01121 Petunia axillaris
PGR042G1012 Punica granatum
PGSC0003DMG400009321 Solanum tuberosum
Phvul.009G055300 Phaseolus vulgaris
Potri.001G135500 Populus trichocarpa
Potri.003G098100 Populus trichocarpa
Pp3c6_2460 Physcomitrium patens
Prupe.5G026300 Prunus persica
Psat4g164680 Pisum sativum
Psat5g079040 Pisum sativum
Psat5g281560 Pisum sativum
PSO017G0107 Papaver somniferum
PSO170G5482 Papaver somniferum
QL12p001817 Quercus lobata
RcHm_v2.0_Chr7g0212251 Rosa chinensis
Rhsim07G0134000 Rhododendron simsii
Rhsim11G0029400 Rhododendron simsii
Sabra01G0104900 Salix brachista
Sabra03G0066500 Salix brachista
SalBow3G2915 Salvia bowleyana
SalBow8G3982 Salvia bowleyana
Sc07g0008560 Simmondsia chinensis
Sed0001384 Sechium edule
Sed0004953 Sechium edule
SEGI_07676 Sequoiadendron giganteum
SEGI_20040 Sequoiadendron giganteum
SEGI_21838 Sequoiadendron giganteum
SEGI_25723 Sequoiadendron giganteum
SEGI_27223 Sequoiadendron giganteum
SEGI_33170 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31387 Striga asiatica
SMO351G0538 Selaginella moellendorffii
Solyc06g066310.3 Solanum lycopersicum
Solyc08g076140.3 Solanum lycopersicum
Sopen06g021710 Solanum pennellii
Sopen08g024780 Solanum pennellii
Sp1g27630 Schrenkiella parvula
TAR375G1157 Trochodendron aralioides
TAR636G2924 Trochodendron aralioides
THA.LOC104798509 Tarenaya hassleriana
Thecc.03G311600 Theobroma cacao
Thecc.09G269200 Theobroma cacao
Thhalv10007477m.g Eutrema salsugineum
TPR.G17292 Trifolium pratense
TWI60G0249 Tripterygium wilfordii
TWI81G0829 Tripterygium wilfordii
unitig_748.g7408 Utricularia gibba
vmacro00245 Vaccinium macrocarpon
vmacro14207 Vaccinium macrocarpon
vmacro22392 Vaccinium macrocarpon
VMungo1309G1861 Vigna mungo
Zm00001eb010900 Zea mays
Zm00001eb398490 Zea mays

User provided reference genes

Program Settings