Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p31400 Brassica napus
A01p31410 Brassica napus
Aa31LG10G5270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2586 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2687 Anthoceros agrestis
Actinidia32782 Actinidia chinensis
Ah.02g117460 Amaranthus hybridus
AL3G38380 Arabidopsis lyrata
Aqoxy3G02180 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0KE5GJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BJDV4A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NQH3GN Arachis hypogaea
AT3G23640 Arabidopsis thaliana
ATR0829G165 Amborella trichopoda
Atru.chr6.1509 Acer truncatum
AUR62007422 Chenopodium quinoa
AUR62027310 Chenopodium quinoa
BcaB04g20429 Brassica carinata
BcaB04g20430 Brassica carinata
BcaB04g20431 Brassica carinata
BolC1t03957H Brassica oleracea
BraA01t03265Z Brassica rapa
BraA01t03266Z Brassica rapa
C01p39990 Brassica napus
C01p40000 Brassica napus
CAN.G1731.4 Capsicum annuum
CAN.G1731.5 Capsicum annuum
CANSAT21G1418 Cannabis sativa
CARHR000110 Cardamine hirsuta
CARHR099600 Cardamine hirsuta
Carub.0003s2390 Capsella rubella
Carub.0003s2391 Capsella rubella
Ca_25085_v3 Cicer arietinum L.
Cc00_g19580 Coffea canephora
Cc00_g34630 Coffea canephora
Cc08_g05410 Coffea canephora
Cc08_g05420 Coffea canephora
Cc08_g05430 Coffea canephora
CDE01G0028 Ceratophyllum demersum
Cfa012654 Carpinus fangiana
Cfa012656 Carpinus fangiana
Cfa012657 Carpinus fangiana
Ciclev10000152m.g Citrus clementina
Ciclev10000404m.g Citrus clementina
Ciclev10002552m.g Citrus clementina
Ciclev10011016m.g Citrus clementina
Ciclev10013535m.g Citrus clementina
Ciclev10013908m.g Citrus clementina
CiPaw.11G104000 Carya illinoinensis
ClCG10G000900 Citrullus lanatus
COL.COLO4_06174 Corchorus olitorius
COL.COLO4_24689 Corchorus olitorius
Cpa.g.c48289 Carica papaya
Cpa.g.sc71.50 Carica papaya
Cpa.g.sc71.52 Carica papaya
Cpa.g.sc71.54 Carica papaya
Cpa.g.sc71.57 Carica papaya
CsaV3_3G000980 Cucumis sativus L.
CSS0006745 Camellia sinensis var. sinensis
CSS0018432 Camellia sinensis var. sinensis
CSS0026923 Camellia sinensis var. sinensis
CSS0032199 Camellia sinensis var. sinensis
CSS0043306 Camellia sinensis var. sinensis
CSS0050335 Camellia sinensis var. sinensis
DCAR_004519 Daucus carota
DCAR_004520 Daucus carota
DCAR_022540 Daucus carota
Dinv37419 Davidia involucrata
Duzib116G0431 Durio zibethinus
Duzib116G0855 Durio zibethinus
ECA246G0927 Erigeron canadensis
ECA246G1180 Erigeron canadensis
EL10Ac5g11905 Beta vulgaris
Eucgr.E01209 Eucalyptus grandis
Eucgr.E01212 Eucalyptus grandis
Eucgr.G00330 Eucalyptus grandis
Eucgr.G00331 Eucalyptus grandis
FAN13G2264 Fragaria x ananassa
FAN16G0455 Fragaria x ananassa
FAN18G1127 Fragaria x ananassa
FvH4_5g24150 Fragaria vesca
Glyma.04G123900 Glycine max
Gohir.A02G091200 Gossypium hirsutum
Gohir.D02G109400 Gossypium hirsutum
Gorai.005G124100 Gossypium raimondii
GSVIVG01013642001 Vitis vinifera
GSVIVG01022815001 Vitis vinifera
GSVIVG01036945001 Vitis vinifera
GSVIVG01036946001 Vitis vinifera
GSVIVG01036947001 Vitis vinifera
HanXRQChr17g0537211 Helianthus annuus
Haze_07993 Corylus avellana
Haze_07994 Corylus avellana
Haze_07995 Corylus avellana
HPP92_020874 Vanilla planifolia
HPP92_024265 Vanilla planifolia
HPP92_028112 Vanilla planifolia
HPP92_028113 Vanilla planifolia
Hund14328 Selenicereus undatus
Lalb_Chr09g0325191 Lupinus albus
Lalb_Chr16g0380651 Lupinus albus
Lj2g0003822 Lotus japonicus
Lj8A330G11 Lonicera japonica
Lj8A331G39 Lonicera japonica
Lsat_1_v5_gn_3_23561 Lactuca sativa
Lsat_1_v5_gn_6_67241 Lactuca sativa
Manes.15G187301 Manihot esculenta
Manes.17G004600 Manihot esculenta
Mapoly0059s0108 Marchantia polymorpha
Mapoly0135s0001 Marchantia polymorpha
Mapoly0633s0002 Marchantia polymorpha
MBI04_g21144_MAGBIO Magnolia biondii
MBI04_g21145_MAGBIO Magnolia biondii
MD00G1148100 Malus domestica
MD15G1396100 Malus domestica
Medtr5g026610 Medicago truncatula
MELO3C013786.2 Cucumis melo
Migut.A00539 Erythranthe guttata
Migut.E01361 Erythranthe guttata
Migut.E01363 Erythranthe guttata
MSTRG.24716 Avicennia marina
Nitab4.5_0000030g0360 Nicotiana tabacum
Nitab4.5_0000985g0070 Nicotiana tabacum
Nn1g02038 Nelumbo nucifera
Oeu042194.1 Olea europaea
Oeu042195.1 Olea europaea
Oeu042200.2 Olea europaea
Oeu042203.1 Olea europaea
Oeu042205.1 Olea europaea
Oeu042206.1 Olea europaea
Oeu042228.5 Olea europaea
Oeu042230.1 Olea europaea
Os07g0420700 Oryza sativa ssp. japonica
Os07g0421300 Oryza sativa ssp. japonica
Peaxi162Scf00053g00618 Petunia axillaris
PGR042G2013 Punica granatum
PGSC0003DMG400007975 Solanum tuberosum
Phvul.002G126900 Phaseolus vulgaris
Phvul.002G127000 Phaseolus vulgaris
Potri.001G129600 Populus trichocarpa
Pp3c13_11140 Physcomitrium patens
Pp3c16_2470 Physcomitrium patens
Pp3c19_14150 Physcomitrium patens
Pp3c3_9200 Physcomitrium patens
Pp3c4_24030 Physcomitrium patens
Pp3c5_4460 Physcomitrium patens
Prupe.5G018900 Prunus persica
Psat2g142760 Pisum sativum
Psat2g142920 Pisum sativum
PSO384G3519 Papaver somniferum
PSO384G3949 Papaver somniferum
PSO782G2105 Papaver somniferum
QL02p060306 Quercus lobata
QL02p060347 Quercus lobata
RcHm_v2.0_Chr7g0213741 Rosa chinensis
RcHm_v2.0_Chr7g0213851 Rosa chinensis
RcHm_v2.0_Chr7g0213911 Rosa chinensis
RcHm_v2.0_Chr7g0213921 Rosa chinensis
Rhsim11G0034700 Rhododendron simsii
Sabra01G0099900 Salix brachista
SalBow4G2071 Salvia bowleyana
Sc07g0008250 Simmondsia chinensis
Sc07g0008260 Simmondsia chinensis
Sed0017541 Sechium edule
SEGI_11022 Sequoiadendron giganteum
SEGI_21462 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31354 Striga asiatica
SGA_v2.0_scaffold89G27418 Striga asiatica
SMO116G0166 Selaginella moellendorffii
Solyc08g075530.3 Solanum lycopersicum
Sopen08g024190 Solanum pennellii
Sp3g21340 Schrenkiella parvula
Sp3g21350 Schrenkiella parvula
TAR629G2634 Trochodendron aralioides
THA.LOC104822230 Tarenaya hassleriana
Thecc.03G325300 Theobroma cacao
Thecc.05G000100 Theobroma cacao
Thecc.10G189800 Theobroma cacao
Thecc.10G189900 Theobroma cacao
Thhalv10019990m.g Eutrema salsugineum
TPR.G17247 Trifolium pratense
TPR.G17274 Trifolium pratense
TPR.G39643 Trifolium pratense
TWI60G0525 Tripterygium wilfordii
vmacro00078 Vaccinium macrocarpon
vmacro00079 Vaccinium macrocarpon
VMungo1215G0102 Vigna mungo
VMungo1215G1352 Vigna mungo
Zm00001eb096920 Zea mays
Zm00001eb305980 Zea mays

User provided reference genes

Program Settings