Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p21850 Brassica napus
Aa31LG9G7400 Aethionema arabicum
Aa31LG9G7410 Aethionema arabicum
Actinidia07664 Actinidia chinensis
Actinidia16759 Actinidia chinensis
Actinidia19471 Actinidia chinensis
Actinidia19473 Actinidia chinensis
Actinidia19474 Actinidia chinensis
Actinidia39541 Actinidia chinensis
AL8G13020 Arabidopsis lyrata
AL8G13030 Arabidopsis lyrata
Aqoxy4G00183 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G7GDAG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z306F9 Arachis hypogaea
AT5G45640 Arabidopsis thaliana
AT5G45650 Arabidopsis thaliana
ATR0737G052 Amborella trichopoda
Atru.chr10.1474 Acer truncatum
AUR62027624 Chenopodium quinoa
AUR62035833 Chenopodium quinoa
BcaB07g30877 Brassica carinata
BcaC04g21752 Brassica carinata
BolC9t55666H Brassica oleracea
BraA09t37788Z Brassica rapa
C09p28010 Brassica napus
CAN.G257.105 Capsicum annuum
CAN.G257.106 Capsicum annuum
CAN.G257.110 Capsicum annuum
CAN.G257.113 Capsicum annuum
CANSAT35G0993 Cannabis sativa
CARHR176340 Cardamine hirsuta
Carub.0008s0236 Capsella rubella
Carub.0008s0237 Capsella rubella
Ca_00497_v3 Cicer arietinum L.
Ca_30234_v3 Cicer arietinum L.
Cc09_g10010 Coffea canephora
Cc09_g10040 Coffea canephora
Cc09_g10100 Coffea canephora
Cc09_g10110 Coffea canephora
Cc09_g10120 Coffea canephora
CDE10G0825 Ceratophyllum demersum
CDE10G0933 Ceratophyllum demersum
Cfa020862 Carpinus fangiana
Ciclev10014347m.g Citrus clementina
CiPaw.09G132400 Carya illinoinensis
CiPaw.10G098300 Carya illinoinensis
ClCG01G024120 Citrullus lanatus
CsaV3_6G051240 Cucumis sativus L.
CSS0000218 Camellia sinensis var. sinensis
CSS0002494 Camellia sinensis var. sinensis
CSS0009488 Camellia sinensis var. sinensis
CSS0010519 Camellia sinensis var. sinensis
CSS0010953 Camellia sinensis var. sinensis
CSS0011462 Camellia sinensis var. sinensis
CSS0016767 Camellia sinensis var. sinensis
CSS0042546 Camellia sinensis var. sinensis
CSS0046650 Camellia sinensis var. sinensis
CSS0050320 Camellia sinensis var. sinensis
DCAR_003958 Daucus carota
Dinv01255 Davidia involucrata
Dinv04558 Davidia involucrata
Dinv04562 Davidia involucrata
Dinv32310 Davidia involucrata
Duzib235G0630 Durio zibethinus
ECA236G0777 Erigeron canadensis
EL10Ac8g19822 Beta vulgaris
Eucgr.D00408 Eucalyptus grandis
FAN11G0627 Fragaria x ananassa
FAN16G1644 Fragaria x ananassa
FAN16G2879 Fragaria x ananassa
FAN21G2133 Fragaria x ananassa
FAN25G2285 Fragaria x ananassa
FAN25G3751 Fragaria x ananassa
FvH4_3g06570 Fragaria vesca
FvH4_3g33200 Fragaria vesca
Glyma.13G222800 Glycine max
Gohir.A06G122500 Gossypium hirsutum
Gohir.A10G032800 Gossypium hirsutum
Gohir.D06G140300 Gossypium hirsutum
Gohir.D10G033500 Gossypium hirsutum
Gorai.010G163700 Gossypium raimondii
Gorai.011G035300 Gossypium raimondii
GSVIVG01021314001 Vitis vinifera
GSVIVG01021320001 Vitis vinifera
HanXRQChr04g0113391 Helianthus annuus
Haze_19286 Corylus avellana
Hma1.2p1_0541F.1_g174790 Hydrangea macrophylla
Hma1.2p1_0541F.1_g174800 Hydrangea macrophylla
HPP92_007776 Vanilla planifolia
HPP92_007801 Vanilla planifolia
Hund20874 Selenicereus undatus
Hund20879 Selenicereus undatus
Hund21465 Selenicereus undatus
Lalb_Chr18g0055051 Lupinus albus
Lj1C1180G7 Lonicera japonica
Lj2A313G79 Lonicera japonica
Lj6g0000271 Lotus japonicus
Lj6g0022635 Lotus japonicus
Lsat_1_v5_gn_7_26300 Lactuca sativa
Manes.17G062600 Manihot esculenta
MBI06_g14252_MAGBIO Magnolia biondii
MD00G1093400 Malus domestica
MD10G1270100 Malus domestica
MD10G1270300 Malus domestica
Medtr2g018125 Medicago truncatula
Medtr2g018135 Medicago truncatula
MELO3C007179.2 Cucumis melo
Migut.M00974 Erythranthe guttata
Migut.M00975 Erythranthe guttata
Migut.M00976 Erythranthe guttata
Migut.M00977 Erythranthe guttata
Migut.M00979 Erythranthe guttata
Migut.M00980 Erythranthe guttata
MSTRG.16190 Avicennia marina
MSTRG.7450 Avicennia marina
Nitab4.5_0003913g0030 Nicotiana tabacum
Nitab4.5_0003913g0040 Nicotiana tabacum
Nitab4.5_0005943g0010 Nicotiana tabacum
Nitab4.5_0005943g0020 Nicotiana tabacum
Nitab4.5_0007383g0020 Nicotiana tabacum
Nn3g20976 Nelumbo nucifera
Nn6g34401 Nelumbo nucifera
Oeu001060.1 Olea europaea
Oeu001062.1 Olea europaea
Oeu004260.1 Olea europaea
Oeu021541.1 Olea europaea
Oeu021542.1 Olea europaea
Os01g0727800 Oryza sativa ssp. japonica
Peaxi162Scf00022g00277 Petunia axillaris
Peaxi162Scf00022g02911 Petunia axillaris
Peaxi162Scf00308g00016 Petunia axillaris
Peaxi162Scf01831g00005 Petunia axillaris
PGR031G2705 Punica granatum
PGSC0003DMG400007225 Solanum tuberosum
PGSC0003DMG400019147 Solanum tuberosum
Phvul.006G168800 Phaseolus vulgaris
Potri.011G076700 Populus trichocarpa
Prupe.4G071500 Prunus persica
Psat1g192640 Pisum sativum
PSO541G0866 Papaver somniferum
PSO675G8126 Papaver somniferum
QL05p052706 Quercus lobata
QL05p052733 Quercus lobata
RcHm_v2.0_Chr5g0012581 Rosa chinensis
Rhsim11G0101800 Rhododendron simsii
Sabra11G0063800 Salix brachista
SalBow8G1145 Salvia bowleyana
SalBow8G2209 Salvia bowleyana
SalBow8G3398 Salvia bowleyana
SalBow8G4254 Salvia bowleyana
SalBow8G4536 Salvia bowleyana
SalBow8G4773 Salvia bowleyana
Sc17g0005500 Simmondsia chinensis
Sed0024540 Sechium edule
SEGI_13269 Sequoiadendron giganteum
SEGI_37119 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07724 Striga asiatica
SGA_v2.0_scaffold16G07726 Striga asiatica
SGA_v2.0_scaffold16G07730 Striga asiatica
SGA_v2.0_scaffold1G00114 Striga asiatica
SGA_v2.0_scaffold52G18924 Striga asiatica
SGA_v2.0_scaffold6G03170 Striga asiatica
SMO351G0429 Selaginella moellendorffii
Solyc02g071560.4 Solanum lycopersicum
Solyc02g071580.4 Solanum lycopersicum
Sopen02g020580 Solanum pennellii
Sopen02g020600 Solanum pennellii
Sp2g10530 Schrenkiella parvula
Sp2g10540 Schrenkiella parvula
TAR626G1327 Trochodendron aralioides
TAR627G0921 Trochodendron aralioides
THA.LOC104798469 Tarenaya hassleriana
THA.LOC104806175 Tarenaya hassleriana
Thecc.06G160100 Theobroma cacao
Thhalv10000784m.g Eutrema salsugineum
Thhalv10001127m.g Eutrema salsugineum
TPR.G4522 Trifolium pratense
TWI09G0138 Tripterygium wilfordii
TWI09G0620 Tripterygium wilfordii
TWI09G0831 Tripterygium wilfordii
TWI09G1064 Tripterygium wilfordii
TWI09G1214 Tripterygium wilfordii
TWI09G1393 Tripterygium wilfordii
TWI31G0824 Tripterygium wilfordii
TWI32G0290 Tripterygium wilfordii
TWI73G0055 Tripterygium wilfordii
TWI73G1137 Tripterygium wilfordii
vmacro03992 Vaccinium macrocarpon
VMungo0540G2249 Vigna mungo
Zm00001eb154300 Zea mays

User provided reference genes

Program Settings