Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p12210 Brassica napus
A08p26570 Brassica napus
A09p38830 Brassica napus
Aa31LG4G12290 Aethionema arabicum
Aa31LG7G9530 Aethionema arabicum
Actinidia08112 Actinidia chinensis
Actinidia15123 Actinidia chinensis
Actinidia37459 Actinidia chinensis
Ah.02g130390 Amaranthus hybridus
Ah.03g133570 Amaranthus hybridus
AL1G40440 Arabidopsis lyrata
AL2G26480 Arabidopsis lyrata
Aqoxy2G01992 Aquilegia oxysepala
Aqoxy3G00663 Aquilegia oxysepala
Aqoxy3G01361 Aquilegia oxysepala
Aqoxy7G01855 Aquilegia oxysepala
Aqoxy7G01857 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K5BW40 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W00XVX Arachis hypogaea
AT1G24510 Arabidopsis thaliana
AT1G67760 Arabidopsis thaliana
ATR0824G281 Amborella trichopoda
Atru.chr11.2192 Acer truncatum
Atru.chr11.2193 Acer truncatum
AUR62005528 Chenopodium quinoa
AUR62005529 Chenopodium quinoa
AUR62024208 Chenopodium quinoa
BcaB03g12057 Brassica carinata
BcaB03g14007 Brassica carinata
BcaC01g01645 Brassica carinata
BcaC05g26519 Brassica carinata
BcaC05g26520 Brassica carinata
BcaC05g26712 Brassica carinata
BcaC06g35255 Brassica carinata
BolC3t19640H Brassica oleracea
BolC5t31296H Brassica oleracea
BolC7t42328H Brassica oleracea
BraA07t29005Z Brassica rapa
BraA08t34609Z Brassica rapa
BraA09t39390Z Brassica rapa
C03p73450 Brassica napus
C05p25680 Brassica napus
C07p18170 Brassica napus
CAN.G371.65 Capsicum annuum
CAN.G44.1 Capsicum annuum
CAN.G629.1 Capsicum annuum
CAN.G658.2 Capsicum annuum
CAN.G658.4 Capsicum annuum
CANSAT01G1557 Cannabis sativa
CARHR026610 Cardamine hirsuta
Carub.0001s2560 Capsella rubella
Carub.0002s1419 Capsella rubella
Ca_25126_v3 Cicer arietinum L.
CBR_g40771 Chara braunii
Cc11_g16190 Coffea canephora
CDE02G0970 Ceratophyllum demersum
CDE09G0295 Ceratophyllum demersum
Cfa001637 Carpinus fangiana
Cfa009265 Carpinus fangiana
Ciclev10031191m.g Citrus clementina
CiPaw.05G176300 Carya illinoinensis
ClCG08G017540 Citrullus lanatus
COL.COLO4_23539 Corchorus olitorius
Cpa.g.sc33.88 Carica papaya
Cre03.g156750 Chlamydomonas reinhardtii
CsaV3_2G025080 Cucumis sativus L.
CSS0034236 Camellia sinensis var. sinensis
DCAR_007030 Daucus carota
Dinv11027 Davidia involucrata
Dinv14759 Davidia involucrata
Duzib248G0682 Durio zibethinus
Duzib268G0205 Durio zibethinus
ECA234G0587 Erigeron canadensis
EL10As2g23192 Beta vulgaris
Eucgr.B03239 Eucalyptus grandis
FAN04G3081 Fragaria x ananassa
FAN08G2630 Fragaria x ananassa
FAN13G1794 Fragaria x ananassa
FAN18G3434 Fragaria x ananassa
FvH4_5g28870 Fragaria vesca
Glyma.11G244700 Glycine max
Glyma.18G012400 Glycine max
Gohir.A01G157200 Gossypium hirsutum
Gohir.A05G311900 Gossypium hirsutum
Gohir.A12G146300 Gossypium hirsutum
Gohir.D01G153200 Gossypium hirsutum
Gohir.D05G312900 Gossypium hirsutum
Gohir.D12G150900 Gossypium hirsutum
Gorai.002G189700 Gossypium raimondii
Gorai.008G162400 Gossypium raimondii
Gorai.009G334400 Gossypium raimondii
GSVIVG01000590001 Vitis vinifera
GSVIVG01020856001 Vitis vinifera
HanXRQChr05g0128801 Helianthus annuus
HanXRQChr12g0385851 Helianthus annuus
HanXRQChr12g0385861 Helianthus annuus
HanXRQChr17g0569181 Helianthus annuus
Haze_12299 Corylus avellana
Haze_26958 Corylus avellana
Hma1.2p1_0079F.1_g041300 Hydrangea macrophylla
Hma1.2p1_0815F.1_g222810 Hydrangea macrophylla
HPP92_001208 Vanilla planifolia
Hund06050 Selenicereus undatus
Hund25414 Selenicereus undatus
Lalb_Chr01g0021371 Lupinus albus
Lalb_Chr03g0039791 Lupinus albus
Lalb_Chr19g0127401 Lupinus albus
Lj3C1063G7 Lonicera japonica
Lj6A817T55 Lonicera japonica
Lj6g0014415 Lotus japonicus
Lsat_1_v5_gn_4_2661 Lactuca sativa
Lsat_1_v5_gn_8_155141 Lactuca sativa
Manes.12G019200 Manihot esculenta
Manes.13G019600 Manihot esculenta
Mapoly0051s0088 Marchantia polymorpha
MBI10_g17801_MAGBIO Magnolia biondii
MCO07G493 Micromonas commoda
MD13G1106100 Malus domestica
MD16G1106300 Malus domestica
Medtr3g086330 Medicago truncatula
MELO3C010705.2 Cucumis melo
Migut.E00224 Erythranthe guttata
Migut.K00638 Erythranthe guttata
MSTRG.13335 Avicennia marina
MSTRG.7958 Avicennia marina
Nitab4.5_0000041g0130 Nicotiana tabacum
Nitab4.5_0000669g0270 Nicotiana tabacum
Nitab4.5_0000669g0280 Nicotiana tabacum
Nitab4.5_0005274g0040 Nicotiana tabacum
Nitab4.5_0012079g0010 Nicotiana tabacum
Nn3g16164 Nelumbo nucifera
Nn3g16624 Nelumbo nucifera
Nn4g22514 Nelumbo nucifera
Oeu004469.1 Olea europaea
Oeu009693.1 Olea europaea
Oeu009694.1 Olea europaea
Oeu010975.1 Olea europaea
Oeu049171.1 Olea europaea
Os06g0562600 Oryza sativa ssp. japonica
Os10g0568200 Oryza sativa ssp. japonica
Peaxi162Scf00128g00627 Petunia axillaris
PGR102G1580 Punica granatum
PGSC0003DMG401028572 Solanum tuberosum
Phvul.001G256700 Phaseolus vulgaris
Potri.008G182300 Populus trichocarpa
Potri.010G051700 Populus trichocarpa
Pp3c10_25840 Physcomitrium patens
Pp3c20_23570 Physcomitrium patens
PRCOL_00003659 Prasinoderma coloniale
Prupe.1G240000 Prunus persica
Psat5g092720 Pisum sativum
PSO017G1560 Papaver somniferum
PSO478G4577 Papaver somniferum
QL03p056030 Quercus lobata
RcHm_v2.0_Chr4g0432301 Rosa chinensis
Rhsim08G0045300 Rhododendron simsii
Sabra08G0138800 Salix brachista
Sabra10G0018400 Salix brachista
SalBow2G1192 Salvia bowleyana
SalBow8G2690 Salvia bowleyana
Sc04g0009780 Simmondsia chinensis
Sed0010599 Sechium edule
SEGI_03361 Sequoiadendron giganteum
SGA_v2.0_scaffold87G27108 Striga asiatica
SMO339G0030 Selaginella moellendorffii
Solyc04g045410.3 Solanum lycopersicum
Solyc04g045420.1 Solanum lycopersicum
Solyc05g013990.3 Solanum lycopersicum
Sopen04g010380 Solanum pennellii
Sopen05g008940 Solanum pennellii
Sp1g23280 Schrenkiella parvula
Sp5g22770 Schrenkiella parvula
TAR374G0849 Trochodendron aralioides
TAR622G1111 Trochodendron aralioides
TAR629G3233 Trochodendron aralioides
THA.LOC104807780 Tarenaya hassleriana
THA.LOC104825542 Tarenaya hassleriana
Thecc.02G267800 Theobroma cacao
Thhalv10007324m.g Eutrema salsugineum
Thhalv10019724m.g Eutrema salsugineum
TPR.G20618 Trifolium pratense
TWI18G0594 Tripterygium wilfordii
TWI75G1086 Tripterygium wilfordii
unitig_22.g5528 Utricularia gibba
unitig_8.g3931 Utricularia gibba
unitig_8.g3932 Utricularia gibba
vmacro16157 Vaccinium macrocarpon
VMungo1383G1502 Vigna mungo
Zm00001eb118030 Zea mays
Zm00001eb298950 Zea mays

User provided reference genes

Program Settings