Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p05590 Brassica napus
A10p25450 Brassica napus
Aa31LG3G14860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.807 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1439 Anthoceros agrestis
Ah.12g059250 Amaranthus hybridus
Ah.12g059260 Amaranthus hybridus
AL6G23170 Arabidopsis lyrata
Aqoxy2G00934 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MCG0E9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PRYL24 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z56S5U Arachis hypogaea
AT5G12370 Arabidopsis thaliana
ATR0829G125 Amborella trichopoda
Atru.chr5.561 Acer truncatum
Atru.chr5.579 Acer truncatum
AUR62030738 Chenopodium quinoa
AUR62036376 Chenopodium quinoa
BcaB01g05405 Brassica carinata
BolC3t13154H Brassica oleracea
BolC9t59286H Brassica oleracea
BraA03t09896Z Brassica rapa
BraA10t44609Z Brassica rapa
C03p06540 Brassica napus
C09p64520 Brassica napus
CAN.G165.6 Capsicum annuum
CAN.G45.13 Capsicum annuum
CAN.G77.8 Capsicum annuum
CANSAT56G2290 Cannabis sativa
CARHR200740 Cardamine hirsuta
Carub.0006s1087 Capsella rubella
Ca_23448_v3 Cicer arietinum L.
CBR_g24150 Chara braunii
CBR_g38471 Chara braunii
Cc08_g01740 Coffea canephora
CDE06G2354 Ceratophyllum demersum
CDE07G1174 Ceratophyllum demersum
Ciclev10018853m.g Citrus clementina
CiPaw.02G034600 Carya illinoinensis
ClCG05G001230 Citrullus lanatus
ClCG05G001260 Citrullus lanatus
COL.COLO4_15385 Corchorus olitorius
COL.COLO4_22311 Corchorus olitorius
Cpa.g.sc184.32 Carica papaya
Cre12.g551801 Chlamydomonas reinhardtii
Cre12.g551802 Chlamydomonas reinhardtii
CsaV3_3G008620 Cucumis sativus L.
CSS0021365 Camellia sinensis var. sinensis
CSS0027239 Camellia sinensis var. sinensis
CSS0044044 Camellia sinensis var. sinensis
DCAR_006948 Daucus carota
Dinv09574 Davidia involucrata
Dinv09575 Davidia involucrata
Dinv27398 Davidia involucrata
Duzib068G0821 Durio zibethinus
Duzib205G0971 Durio zibethinus
ECA236G4463 Erigeron canadensis
ECA238G2843 Erigeron canadensis
EL10Ac5g12970 Beta vulgaris
Eucgr.E00099 Eucalyptus grandis
FAN01G2394 Fragaria x ananassa
FAN03G0275 Fragaria x ananassa
FAN06G0334 Fragaria x ananassa
FAN06G4614 Fragaria x ananassa
FAN10G2437 Fragaria x ananassa
FAN10G2647 Fragaria x ananassa
FvH4_7g15330 Fragaria vesca
Glyma.07G046100 Glycine max
Glyma.07G162100 Glycine max
Glyma.16G014200 Glycine max
Gohir.A09G045200 Gossypium hirsutum
Gohir.A12G275800 Gossypium hirsutum
Gohir.D09G046200 Gossypium hirsutum
Gohir.D12G276500 Gossypium hirsutum
Gorai.006G064200 Gossypium raimondii
Gorai.008G297000 Gossypium raimondii
GSVIVG01026964001 Vitis vinifera
HanXRQChr02g0038861 Helianthus annuus
HanXRQChr04g0120781 Helianthus annuus
HanXRQChr13g0415591 Helianthus annuus
HanXRQChr14g0445661 Helianthus annuus
Haze_15562 Corylus avellana
Haze_19031 Corylus avellana
Hma1.2p1_0335F.1_g128910 Hydrangea macrophylla
HPP92_003241 Vanilla planifolia
Hund02118 Selenicereus undatus
Hund23292 Selenicereus undatus
Lalb_Chr17g0343201 Lupinus albus
Lalb_Chr18g0044861 Lupinus albus
Lj3g0009129 Lotus japonicus
Lj7A507T47 Lonicera japonica
Lj9A588G62 Lonicera japonica
Lsat_1_v5_gn_3_138540 Lactuca sativa
Lsat_1_v5_gn_7_3960 Lactuca sativa
Manes.01G252500 Manihot esculenta
Manes.05G029701 Manihot esculenta
Mapoly0070s0084 Marchantia polymorpha
MBI03_g34513_MAGBIO Magnolia biondii
MBI03_g44580_MAGBIO Magnolia biondii
MBI08_g05068_MAGBIO Magnolia biondii
MBI14_g09475_MAGBIO Magnolia biondii
MBI17_g30844_MAGBIO Magnolia biondii
MBI19_g38425_MAGBIO Magnolia biondii
MCO10G270 Micromonas commoda
MD01G1071200 Malus domestica
MD07G1131500 Malus domestica
Medtr8g023330 Medicago truncatula
MELO3C006082.2 Cucumis melo
Migut.N01148 Erythranthe guttata
MSTRG.27756 Avicennia marina
Nitab4.5_0000171g0380 Nicotiana tabacum
Nitab4.5_0004323g0080 Nicotiana tabacum
Nitab4.5_0006926g0010 Nicotiana tabacum
Nitab4.5_0010629g0020 Nicotiana tabacum
Nn1g01682 Nelumbo nucifera
Nn6g35074 Nelumbo nucifera
Oeu015217.1 Olea europaea
Oeu015218.3 Olea europaea
Oeu036591.1 Olea europaea
Os12g0238100 Oryza sativa ssp. japonica
Peaxi162Scf00073g02118 Petunia axillaris
Peaxi162Scf00154g00427 Petunia axillaris
PGR042G3260 Punica granatum
PGSC0003DMG400005252 Solanum tuberosum
Phvul.010G123000 Phaseolus vulgaris
Potri.002G164100 Populus trichocarpa
Potri.014G090100 Populus trichocarpa
Pp3c10_23750 Physcomitrium patens
Pp3c17_2120 Physcomitrium patens
Pp3c7_5960 Physcomitrium patens
PRCOL_00002354 Prasinoderma coloniale
Prupe.2G177200 Prunus persica
Psat3g201360 Pisum sativum
Psat4g164920 Pisum sativum
PSO266G0033 Papaver somniferum
PSO478G3452 Papaver somniferum
PSO478G4032 Papaver somniferum
QL04p055468 Quercus lobata
QL05p039330 Quercus lobata
RcHm_v2.0_Chr1g0357661 Rosa chinensis
RcHm_v2.0_Chr1g0375581 Rosa chinensis
RcHm_v2.0_Chr1g0375601 Rosa chinensis
RcHm_v2.0_Chr1g0375651 Rosa chinensis
RcHm_v2.0_Chr1g0375661 Rosa chinensis
Rhsim07G0010700 Rhododendron simsii
Sabra02G0147000 Salix brachista
Sabra14G0065400 Salix brachista
SalBow4G2543 Salvia bowleyana
SalBow5G2358 Salvia bowleyana
SalBow6G0922 Salvia bowleyana
SalBow6G4826 Salvia bowleyana
Sc03g0008850 Simmondsia chinensis
Sed0000810 Sechium edule
Sed0017270 Sechium edule
Sed0024683 Sechium edule
SEGI_20614 Sequoiadendron giganteum
SEGI_22298 Sequoiadendron giganteum
SEGI_24596 Sequoiadendron giganteum
SEGI_32899 Sequoiadendron giganteum
SGA_v2.0_scaffold67G22717 Striga asiatica
SMO329G0014 Selaginella moellendorffii
Solyc03g095410.3 Solanum lycopersicum
Solyc10g019100.2 Solanum lycopersicum
Solyc10g019110.2 Solanum lycopersicum
Solyc10g019120.1 Solanum lycopersicum
Solyc10g019130.3 Solanum lycopersicum
Solyc10g019140.1 Solanum lycopersicum
Solyc11g050710.2 Solanum lycopersicum
Sopen00g003310 Solanum pennellii
Sopen00g004930 Solanum pennellii
Sopen03g025390 Solanum pennellii
Sopen10g009040 Solanum pennellii
Sopen10g009060 Solanum pennellii
Sopen10g009070 Solanum pennellii
Sopen10g009080 Solanum pennellii
Sopen11g021810 Solanum pennellii
Sp6g31270 Schrenkiella parvula
TAR374G0165 Trochodendron aralioides
TAR375G0541 Trochodendron aralioides
THA.LOC104811828 Tarenaya hassleriana
Thecc.03G000600 Theobroma cacao
Thecc.06G000300 Theobroma cacao
Thhalv10012686m.g Eutrema salsugineum
TPR.G21815 Trifolium pratense
TPR.G39543 Trifolium pratense
TWI59G1008 Tripterygium wilfordii
unitig_21.g20340 Utricularia gibba
vmacro13231 Vaccinium macrocarpon
VMungo0331G1030 Vigna mungo
VMungo1383G1077 Vigna mungo
Zm00001eb133590 Zea mays

User provided reference genes

Program Settings