Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p13150 Brassica napus
A09p16150 Brassica napus
Aa31LG2G230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2850 Anthoceros agrestis
Actinidia02109 Actinidia chinensis
Actinidia27454 Actinidia chinensis
Ah.02g115360 Amaranthus hybridus
Ah.12g062230 Amaranthus hybridus
AL2G13230 Arabidopsis lyrata
Aqoxy1G02009 Aquilegia oxysepala
Aqoxy5G03922 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AX7FJG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EZ70MQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0ISBZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UBEE9G Arachis hypogaea
AT1G62640 Arabidopsis thaliana
ATR0001G047 Amborella trichopoda
Atru.chr9.1375 Acer truncatum
AUR62007480 Chenopodium quinoa
AUR62011765 Chenopodium quinoa
AUR62024611 Chenopodium quinoa
AUR62039936 Chenopodium quinoa
BcaB07g31342 Brassica carinata
BcaC04g22425 Brassica carinata
BcaC04g22757 Brassica carinata
BolC9t54465H Brassica oleracea
BolC9t54852H Brassica oleracea
BraA09t36961Z Brassica rapa
BraA09t37250Z Brassica rapa
C09p15600 Brassica napus
C09p19490 Brassica napus
CAN.G285.10 Capsicum annuum
CAN.G530.5 Capsicum annuum
CAN.G530.6 Capsicum annuum
CAN.G732.11 Capsicum annuum
CAN.G732.12 Capsicum annuum
CANSAT21G0390 Cannabis sativa
CARHR049250 Cardamine hirsuta
Carub.0002s0233 Capsella rubella
Ca_01015_v3 Cicer arietinum L.
Ca_20540_v3 Cicer arietinum L.
CBR_g30012 Chara braunii
Cc06_g13250 Coffea canephora
CDE09G1199 Ceratophyllum demersum
CDE11G1032 Ceratophyllum demersum
Cfa012769 Carpinus fangiana
Ciclev10020462m.g Citrus clementina
CiPaw.11G150900 Carya illinoinensis
CiPaw.12G107100 Carya illinoinensis
ClCG01G003860 Citrullus lanatus
COL.COLO4_37209 Corchorus olitorius
Cpa.g.sc29.131 Carica papaya
Cre04.g216950 Chlamydomonas reinhardtii
CsaV3_5G003990 Cucumis sativus L.
CSS0013092 Camellia sinensis var. sinensis
CSS0031797 Camellia sinensis var. sinensis
DCAR_008467 Daucus carota
DCAR_027796 Daucus carota
Dinv21605 Davidia involucrata
Dinv39108 Davidia involucrata
Duzib068G0523 Durio zibethinus
Duzib084G0469 Durio zibethinus
ECA233G4900 Erigeron canadensis
ECA246G1886 Erigeron canadensis
EL10Ac5g13014 Beta vulgaris
Eucgr.E00458 Eucalyptus grandis
FAN04G1135 Fragaria x ananassa
FAN08G1487 Fragaria x ananassa
FAN13G2916 Fragaria x ananassa
FAN18G0254 Fragaria x ananassa
FvH4_5g00250 Fragaria vesca
Glyma.09G277400 Glycine max
Glyma.18G211400 Glycine max
Gohir.A09G195600 Gossypium hirsutum
Gohir.A11G026500 Gossypium hirsutum
Gohir.D09G190200 Gossypium hirsutum
Gohir.D11G025800 Gossypium hirsutum
Gorai.006G212800 Gossypium raimondii
Gorai.007G028000 Gossypium raimondii
GSVIVG01001278001 Vitis vinifera
GSVIVG01004779001 Vitis vinifera
HanXRQChr02g0049441 Helianthus annuus
HanXRQChr05g0148701 Helianthus annuus
HanXRQChr13g0394981 Helianthus annuus
HanXRQChr17g0550351 Helianthus annuus
Haze_07861 Corylus avellana
Hma1.2p1_1414F.1_g281900 Hydrangea macrophylla
HPP92_013054 Vanilla planifolia
HPP92_013064 Vanilla planifolia
Hund14601 Selenicereus undatus
Lalb_Chr00c36g0408821 Lupinus albus
Lalb_Chr00c36g0408951 Lupinus albus
Lalb_Chr22g0349441 Lupinus albus
Lalb_Chr24g0392881 Lupinus albus
Lalb_Chr25g0278851 Lupinus albus
Lj3g0024855 Lotus japonicus
Lj8C258T8 Lonicera japonica
Lj8C337T1 Lonicera japonica
Lsat_1_v5_gn_3_2160 Lactuca sativa
Lsat_1_v5_gn_6_109081 Lactuca sativa
Lsat_1_v5_gn_6_1880 Lactuca sativa
Manes.01G076900 Manihot esculenta
Manes.02G036200 Manihot esculenta
Mapoly0040s0081 Marchantia polymorpha
MBI03_g12759_MAGBIO Magnolia biondii
MBI11_g24608_MAGBIO Magnolia biondii
MCO03G154 Micromonas commoda
MD04G1084900 Malus domestica
MD04G1085000 Malus domestica
MD08G1135900 Malus domestica
MD09G1022600 Malus domestica
MD12G1033000 Malus domestica
Medtr2g105100 Medicago truncatula
Medtr4g007180 Medicago truncatula
Medtr5g009640 Medicago truncatula
MELO3C005558.2 Cucumis melo
Migut.J01479 Erythranthe guttata
MSTRG.19706 Avicennia marina
MSTRG.26221 Avicennia marina
Nitab4.5_0000011g0260 Nicotiana tabacum
Nitab4.5_0000021g1070 Nicotiana tabacum
Nitab4.5_0001108g0030 Nicotiana tabacum
Nitab4.5_0004670g0040 Nicotiana tabacum
Nn2g11781 Nelumbo nucifera
Nn8g39222 Nelumbo nucifera
Oeu002545.1 Olea europaea
Oeu009849.2 Olea europaea
Oeu056512.1 Olea europaea
Oeu056513.1 Olea europaea
Os04g0643300 Oryza sativa ssp. japonica
Peaxi162Scf00133g00016 Petunia axillaris
Peaxi162Scf00133g00053 Petunia axillaris
Peaxi162Scf00133g00527 Petunia axillaris
Peaxi162Scf00516g00327 Petunia axillaris
Peaxi162Scf00909g00014 Petunia axillaris
Peaxi162Scf00909g00216 Petunia axillaris
Peaxi162Scf01440g00024 Petunia axillaris
Peaxi162Scf01440g00026 Petunia axillaris
Peaxi162Scf01440g00027 Petunia axillaris
Peaxi162Scf02044g00012 Petunia axillaris
Peaxi162Scf03529g00006 Petunia axillaris
PGR042G2869 Punica granatum
PGSC0003DMG400026308 Solanum tuberosum
Phvul.008G086600 Phaseolus vulgaris
Potri.001G120900 Populus trichocarpa
Potri.003G112101 Populus trichocarpa
Pp3c11_14950 Physcomitrium patens
Pp3c2_25970 Physcomitrium patens
Pp3c7_10260 Physcomitrium patens
PRCOL_00000872 Prasinoderma coloniale
Prupe.5G075100 Prunus persica
Psat5g306080 Pisum sativum
PSO017G6794 Papaver somniferum
PSO063G1414 Papaver somniferum
PSO170G2789 Papaver somniferum
PSO782G4661 Papaver somniferum
QL06p053048 Quercus lobata
QL12p013407 Quercus lobata
RcHm_v2.0_Chr7g0202391 Rosa chinensis
Rhsim03G0143900 Rhododendron simsii
Rhsim07G0104900 Rhododendron simsii
Sabra01G0093100 Salix brachista
SalBow1G3248 Salvia bowleyana
SalBow6G1354 Salvia bowleyana
Sc19g0002810 Simmondsia chinensis
Sed0001437 Sechium edule
SGA_v2.0_scaffold69G23257 Striga asiatica
SHI20570 Sapria himalayana
SMO270G0022 Selaginella moellendorffii
SMO308G0014 Selaginella moellendorffii
Solyc03g097470.3 Solanum lycopersicum
Solyc08g006560.3 Solanum lycopersicum
Sopen03g028240 Solanum pennellii
Sopen08g002520 Solanum pennellii
Sp2g02000 Schrenkiella parvula
TAR629G0380 Trochodendron aralioides
TAR636G2130 Trochodendron aralioides
THA.LOC104809460 Tarenaya hassleriana
THA.LOC104823549 Tarenaya hassleriana
Thecc.03G256500 Theobroma cacao
Thhalv10023499m.g Eutrema salsugineum
TPR.G19173 Trifolium pratense
TWI60G0644 Tripterygium wilfordii
TWI81G1045 Tripterygium wilfordii
unitig_21.g20649 Utricularia gibba
vmacro06967 Vaccinium macrocarpon
vmacro14103 Vaccinium macrocarpon
VMungo1383G1558 Vigna mungo
Zm00001eb068760 Zea mays
Zm00001eb086810 Zea mays
Zm00001eb431950 Zea mays

User provided reference genes

Program Settings