Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20740 Brassica napus
A04p27160 Brassica napus
A05p10000 Brassica napus
Aa31LG2G12720 Aethionema arabicum
Aa31LG9G12190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3300 Anthoceros agrestis
Actinidia02134 Actinidia chinensis
Actinidia14429 Actinidia chinensis
Actinidia14430 Actinidia chinensis
Ah.02g116730 Amaranthus hybridus
Ah.12g056820 Amaranthus hybridus
AL4G31800 Arabidopsis lyrata
AL7G38160 Arabidopsis lyrata
Aqoxy7G00748 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IP6Y6A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L44UVB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9W8F0 Arachis hypogaea
AT2G35710 Arabidopsis thaliana
AT4G16600 Arabidopsis thaliana
ATR0317G058 Amborella trichopoda
Atru.chr9.1314 Acer truncatum
AUR62007516 Chenopodium quinoa
AUR62042795 Chenopodium quinoa
BcaB02g09398 Brassica carinata
BcaB06g28863 Brassica carinata
BcaC02g07678 Brassica carinata
BcaC02g11694 Brassica carinata
BcaC09g50386 Brassica carinata
BcaNung00167 Brassica carinata
BcaNung00168 Brassica carinata
BolC1t02554H Brassica oleracea
BolC4t22874H Brassica oleracea
BolC4t27944H Brassica oleracea
BraA01t01998Z Brassica rapa
BraA04t18214Z Brassica rapa
BraA05t19939Z Brassica rapa
C01p26090 Brassica napus
C04p12280 Brassica napus
C04p64670 Brassica napus
CAN.G1367.8 Capsicum annuum
CAN.G62.44 Capsicum annuum
CANSAT21G1509 Cannabis sativa
CARHR129950 Cardamine hirsuta
CARHR223100 Cardamine hirsuta
Carub.0004s1744 Capsella rubella
Carub.0007s2480 Capsella rubella
Ca_21965_v3 Cicer arietinum L.
Ca_24576_v3 Cicer arietinum L.
CBR_g37199 Chara braunii
CBR_g39657 Chara braunii
Cc08_g12440 Coffea canephora
CDE02G3542 Ceratophyllum demersum
CDE11G0502 Ceratophyllum demersum
Cfa012717 Carpinus fangiana
Ciclev10019980m.g Citrus clementina
CiPaw.11G079100 Carya illinoinensis
CiPaw.12G052900 Carya illinoinensis
ClCG10G002700 Citrullus lanatus
COL.COLO4_37179 Corchorus olitorius
Cpa.g.sc29.157 Carica papaya
CsaV3_3G002730 Cucumis sativus L.
CSS0020750 Camellia sinensis var. sinensis
CSS0029742 Camellia sinensis var. sinensis
CSS0034933 Camellia sinensis var. sinensis
DCAR_027774 Daucus carota
Dinv21637 Davidia involucrata
Dinv39146 Davidia involucrata
Duzib068G1097 Durio zibethinus
Duzib084G0678 Durio zibethinus
Duzib136G0005 Durio zibethinus
Duzib205G0280 Durio zibethinus
ECA232G3118 Erigeron canadensis
EL10Ac5g13070 Beta vulgaris
Eucgr.D02078 Eucalyptus grandis
FAN04G0564 Fragaria x ananassa
FAN08G2158 Fragaria x ananassa
FAN13G2103 Fragaria x ananassa
FAN18G0225 Fragaria x ananassa
FAN18G1917 Fragaria x ananassa
FvH4_5g18860 Fragaria vesca
Glyma.01G209600 Glycine max
Glyma.01G209633 Glycine max
Glyma.05G059300 Glycine max
Glyma.11G032600 Glycine max
Glyma.17G141600 Glycine max
Gohir.A08G170566 Gossypium hirsutum
Gohir.A12G217200 Gossypium hirsutum
Gohir.D08G188766 Gossypium hirsutum
Gohir.D12G219700 Gossypium hirsutum
Gorai.004G198800 Gossypium raimondii
Gorai.008G235400 Gossypium raimondii
GSVIVG01006161001 Vitis vinifera
HanXRQChr17g0549291 Helianthus annuus
Haze_07915 Corylus avellana
Hma1.2p1_1172F.1_g263610 Hydrangea macrophylla
HPP92_003451 Vanilla planifolia
HPP92_021036 Vanilla planifolia
HPP92_027428 Vanilla planifolia
HPP92_027429 Vanilla planifolia
HPP92_028332 Vanilla planifolia
HPP92_028333 Vanilla planifolia
Hund11596 Selenicereus undatus
Hund14536 Selenicereus undatus
Lalb_Chr05g0214481 Lupinus albus
Lalb_Chr05g0221271 Lupinus albus
Lalb_Chr09g0330131 Lupinus albus
Lalb_Chr16g0379581 Lupinus albus
Lj2g0015856 Lotus japonicus
Lj4g0025080 Lotus japonicus
Lj6A70T56 Lonicera japonica
Lj8A262T38 Lonicera japonica
Lsat_1_v5_gn_3_138880 Lactuca sativa
Manes.02G039400 Manihot esculenta
Mapoly0066s0014 Marchantia polymorpha
MD06G1058200 Malus domestica
Medtr4g100950 Medicago truncatula
Medtr5g012590 Medicago truncatula
MELO3C013941.2 Cucumis melo
Migut.A00946 Erythranthe guttata
MSTRG.12097 Avicennia marina
MSTRG.25525 Avicennia marina
Nitab4.5_0000312g0110 Nicotiana tabacum
Nitab4.5_0000618g0030 Nicotiana tabacum
Nitab4.5_0001076g0110 Nicotiana tabacum
Nitab4.5_0005960g0010 Nicotiana tabacum
Nn1g00997 Nelumbo nucifera
Nn6g33961 Nelumbo nucifera
Oeu006979.1 Olea europaea
Oeu020147.1 Olea europaea
Os04g0553800 Oryza sativa ssp. japonica
Os10g0555100 Oryza sativa ssp. japonica
Peaxi162Scf00174g00025 Petunia axillaris
Peaxi162Scf02065g00021 Petunia axillaris
PGR031G3334 Punica granatum
PGSC0003DMG400004758 Solanum tuberosum
PGSC0003DMG400011872 Solanum tuberosum
Phvul.002G063000 Phaseolus vulgaris
Phvul.003G220400 Phaseolus vulgaris
Potri.001G158000 Populus trichocarpa
Potri.003G076800 Populus trichocarpa
Pp3c13_12560 Physcomitrium patens
Pp3c26_7880 Physcomitrium patens
Pp3c3_18090 Physcomitrium patens
Pp3c9_13380 Physcomitrium patens
Prupe.5G069400 Prunus persica
Psat2g178320 Pisum sativum
Psat4g072160 Pisum sativum
PSO017G2532 Papaver somniferum
PSO170G5518 Papaver somniferum
QL12p012159 Quercus lobata
RcHm_v2.0_Chr7g0203241 Rosa chinensis
Rhsim07G0108400 Rhododendron simsii
Sabra01G0133500 Salix brachista
Sabra03G0047200 Salix brachista
SalBow6G4064 Salvia bowleyana
Sc01g0008450 Simmondsia chinensis
Sed0009249 Sechium edule
SEGI_02205 Sequoiadendron giganteum
SEGI_02778 Sequoiadendron giganteum
SEGI_08661 Sequoiadendron giganteum
SEGI_32290 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32885 Striga asiatica
SGA_v2.0_scaffold146G36150 Striga asiatica
SMO367G1194 Selaginella moellendorffii
Solyc06g060710.4 Solanum lycopersicum
Solyc08g078650.3 Solanum lycopersicum
Sopen06g020830 Solanum pennellii
Sopen08g027130 Solanum pennellii
Sp4g17980 Schrenkiella parvula
Sp7g15220 Schrenkiella parvula
TAR629G2039 Trochodendron aralioides
TAR636G0838 Trochodendron aralioides
THA.LOC104812777 Tarenaya hassleriana
THA.LOC104814476 Tarenaya hassleriana
THA.LOC104815495 Tarenaya hassleriana
Thecc.03G251600 Theobroma cacao
Thhalv10016563m.g Eutrema salsugineum
Thhalv10027002m.g Eutrema salsugineum
TPR.G25920 Trifolium pratense
TPR.G37596 Trifolium pratense
TPR.G7346 Trifolium pratense
TWI60G0877 Tripterygium wilfordii
TWI81G0303 Tripterygium wilfordii
unitig_21.g20536 Utricularia gibba
vmacro00199 Vaccinium macrocarpon
vmacro14084 Vaccinium macrocarpon
VMungo0251G1996 Vigna mungo
VMungo1215G3028 Vigna mungo
Zm00001eb023520 Zea mays
Zm00001eb074520 Zea mays
Zm00001eb391530 Zea mays
Zm00001eb429610 Zea mays

User provided reference genes

Program Settings