Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22400 Brassica napus
A03p29900 Brassica napus
A04p30180 Brassica napus
A05p06460 Brassica napus
Aa31LG5G19650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5499 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5500 Anthoceros agrestis
Actinidia00934 Actinidia chinensis
Actinidia13919 Actinidia chinensis
Ah.10g035550 Amaranthus hybridus
Ah.16g104950 Amaranthus hybridus
AL4G37540 Arabidopsis lyrata
AL6G47820 Arabidopsis lyrata
Aqoxy214s003 Aquilegia oxysepala
Aqoxy2G00973 Aquilegia oxysepala
Aqoxy4G02660 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7TWC5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C86U5P Arachis hypogaea
AT2G39960 Arabidopsis thaliana
AT4G04200 Arabidopsis thaliana
ATR0618G113 Amborella trichopoda
ATR0618G195 Amborella trichopoda
Atru.chr12.241 Acer truncatum
AUR62012465 Chenopodium quinoa
AUR62031591 Chenopodium quinoa
BcaB01g03582 Brassica carinata
BcaB02g09065 Brassica carinata
BcaB06g29118 Brassica carinata
BcaC01g05451 Brassica carinata
BcaC02g07386 Brassica carinata
BolC3t15040H Brassica oleracea
BolC4t22371H Brassica oleracea
BolC4t28272H Brassica oleracea
BraA03t11468Z Brassica rapa
BraA04t18491Z Brassica rapa
BraA05t19614Z Brassica rapa
C03p26520 Brassica napus
C04p07540 Brassica napus
C04p67700 Brassica napus
CAN.G1252.7 Capsicum annuum
CANSAT56G1382 Cannabis sativa
CARHR134880 Cardamine hirsuta
CARHR134890 Cardamine hirsuta
CARHR253310 Cardamine hirsuta
CARHR253320 Cardamine hirsuta
Carub.0004s2209 Capsella rubella
Carub.0006s3211 Capsella rubella
Ca_05932_v3 Cicer arietinum L.
CBR_g48322 Chara braunii
Cc02_g06900 Coffea canephora
Cc02_g06910 Coffea canephora
CDE03G0334 Ceratophyllum demersum
CDE04G3620 Ceratophyllum demersum
Cfa001366 Carpinus fangiana
Ciclev10032786m.g Citrus clementina
CiPaw.01G295800 Carya illinoinensis
CiPaw.02G189900 Carya illinoinensis
ClCG07G004000 Citrullus lanatus
ClCG07G004010 Citrullus lanatus
COL.COLO4_25658 Corchorus olitorius
Cpa.g.c40050 Carica papaya
Cre12.g524200 Chlamydomonas reinhardtii
CsaV3_5G008920 Cucumis sativus L.
CSS0000698 Camellia sinensis var. sinensis
DCAR_011789 Daucus carota
Dinv20956 Davidia involucrata
Dinv20987 Davidia involucrata
Duzib106G0197 Durio zibethinus
Duzib114G0190 Durio zibethinus
Duzib128G2055 Durio zibethinus
ECA233G2895 Erigeron canadensis
ECA238G4332 Erigeron canadensis
EL10Ac2g04131 Beta vulgaris
Eucgr.G03033 Eucalyptus grandis
FAN01G1497 Fragaria x ananassa
FAN03G0251 Fragaria x ananassa
FAN06G4561 Fragaria x ananassa
FAN15G1698 Fragaria x ananassa
FAN27G3190 Fragaria x ananassa
FvH4_2g40940 Fragaria vesca
FvH4_7g24030 Fragaria vesca
Glyma.02G254500 Glycine max
Glyma.14G061900 Glycine max
Gohir.A10G229700 Gossypium hirsutum
Gohir.A13G016600 Gossypium hirsutum
Gohir.D10G243900 Gossypium hirsutum
Gohir.D13G017700 Gossypium hirsutum
Gorai.011G280300 Gossypium raimondii
Gorai.013G019600 Gossypium raimondii
GSVIVG01016365001 Vitis vinifera
HanXRQChr08g0222271 Helianthus annuus
HanXRQChr08g0222281 Helianthus annuus
HanXRQChr12g0370541 Helianthus annuus
Haze_17184 Corylus avellana
Hma1.2p1_0710F.1_g207290 Hydrangea macrophylla
Hma1.2p1_2137F.1_g314920 Hydrangea macrophylla
HPP92_016193 Vanilla planifolia
Hund03462 Selenicereus undatus
Lalb_Chr20g0116611 Lupinus albus
Lj1A950T60 Lonicera japonica
Lj1A950T61 Lonicera japonica
LjContig00357g0022102 Lotus japonicus
LjContig00357g0025168 Lotus japonicus
Lsat_1_v5_gn_5_2880 Lactuca sativa
Manes.07G125600 Manihot esculenta
Manes.10G017601 Manihot esculenta
Mapoly0043s0045 Marchantia polymorpha
MBI08_g04934_MAGBIO Magnolia biondii
MBI14_g13584_MAGBIO Magnolia biondii
MBI14_g25462_MAGBIO Magnolia biondii
MBI14_g33799_MAGBIO Magnolia biondii
MBI14_g36886_MAGBIO Magnolia biondii
MBI16_g26377_MAGBIO Magnolia biondii
MBI16_g37731_MAGBIO Magnolia biondii
MCO01G487 Micromonas commoda
MD01G1147400 Malus domestica
MD07G1214300 Malus domestica
MD08G1058200 Malus domestica
MD08G1058400 Malus domestica
MD15G1038100 Malus domestica
Medtr5g081900 Medicago truncatula
Medtr8g093950 Medicago truncatula
MELO3C025156.2 Cucumis melo
Migut.F01424 Erythranthe guttata
Migut.F01426 Erythranthe guttata
MSTRG.8311 Avicennia marina
Nitab4.5_0000099g0220 Nicotiana tabacum
Nitab4.5_0003770g0040 Nicotiana tabacum
Nn2g13624 Nelumbo nucifera
Nn5g27487 Nelumbo nucifera
Oeu036632.1 Olea europaea
Oeu039001.1 Olea europaea
Oeu039509.1 Olea europaea
Os02g0565200 Oryza sativa ssp. japonica
Os04g0446300 Oryza sativa ssp. japonica
Peaxi162Scf00360g00616 Petunia axillaris
PGR142G4151 Punica granatum
PGSC0003DMG400025078 Solanum tuberosum
Phvul.008G226300 Phaseolus vulgaris
Potri.008G064700 Populus trichocarpa
Potri.010G192700 Populus trichocarpa
Pp3c24_20710 Physcomitrium patens
Pp3c8_24950 Physcomitrium patens
PRCOL_00000631 Prasinoderma coloniale
Prupe.1G392100 Prunus persica
Prupe.2G246200 Prunus persica
Prupe.2G246300 Prunus persica
Psat2g035640 Pisum sativum
PSO339G6737 Papaver somniferum
PSO801G0598 Papaver somniferum
RcHm_v2.0_Chr1g0369411 Rosa chinensis
RcHm_v2.0_Chr1g0369421 Rosa chinensis
RcHm_v2.0_Chr6g0299621 Rosa chinensis
Rhsim03G0140200 Rhododendron simsii
Rhsim13G0104300 Rhododendron simsii
Sabra08G0047500 Salix brachista
Sabra10G0148300 Salix brachista
SalBow6G0036 Salvia bowleyana
SalBow6G0374 Salvia bowleyana
SalBow6G1938 Salvia bowleyana
Sc06g0000400 Simmondsia chinensis
Sc09g0010500 Simmondsia chinensis
Sed0008497 Sechium edule
Sed0009203 Sechium edule
SEGI_14870 Sequoiadendron giganteum
SGA_v2.0_scaffold76G25080 Striga asiatica
Solyc04g072032.1 Solanum lycopersicum
Solyc04g072110.4 Solanum lycopersicum
Sopen04g028030 Solanum pennellii
Sp4g22270 Schrenkiella parvula
Sp6g04580 Schrenkiella parvula
SpUn0110_0020 Schrenkiella parvula
TAR633G0614 Trochodendron aralioides
TAR633G1753 Trochodendron aralioides
TAR636G1152 Trochodendron aralioides
TAR636G3666 Trochodendron aralioides
THA.LOC104810073 Tarenaya hassleriana
THA.LOC104824307 Tarenaya hassleriana
Thecc.10G026100 Theobroma cacao
Thhalv10017265m.g Eutrema salsugineum
Thhalv10028970m.g Eutrema salsugineum
TPR.G8041 Trifolium pratense
TWI09G0086 Tripterygium wilfordii
TWI23G0971 Tripterygium wilfordii
TWI53G1335 Tripterygium wilfordii
TWI73G1048 Tripterygium wilfordii
TWI73G1058 Tripterygium wilfordii
unitig_747.g21420 Utricularia gibba
vmacro06993 Vaccinium macrocarpon
vmacro06994 Vaccinium macrocarpon
vmacro10062 Vaccinium macrocarpon
VMungo0647G2503 Vigna mungo
Zm00001eb081650 Zea mays

User provided reference genes

Program Settings