Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06110 Brassica napus
A03p61280 Brassica napus
Aa31LG2G17680 Aethionema arabicum
Actinidia13229 Actinidia chinensis
Actinidia22338 Actinidia chinensis
Actinidia26378 Actinidia chinensis
Actinidia38728 Actinidia chinensis
Ah.09g225050 Amaranthus hybridus
AL7G19570 Arabidopsis lyrata
Aqoxy7G02294 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2A4XC9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.42HTUN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.92FFKE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.987W5L Arachis hypogaea
AT4G32280 Arabidopsis thaliana
Atru.chr7.1110 Acer truncatum
Atru.chr7.2438 Acer truncatum
AUR62011167 Chenopodium quinoa
AUR62013318 Chenopodium quinoa
BcaB03g12739 Brassica carinata
BcaC09g52009 Brassica carinata
BcaNung03580 Brassica carinata
BcaNung05960 Brassica carinata
BolC1t00665H Brassica oleracea
BolC7t46367H Brassica oleracea
BraA01t00575Z Brassica rapa
BraA03t15172Z Brassica rapa
C01p06730 Brassica napus
C07p59140 Brassica napus
CAN.G1230.5 Capsicum annuum
CAN.G138.3 Capsicum annuum
CANSAT11G0432 Cannabis sativa
CARHR240170 Cardamine hirsuta
Carub.0007s0831 Capsella rubella
Cc06_g08150 Coffea canephora
Cc08_g00560 Coffea canephora
Cfa003413 Carpinus fangiana
Cfa013139 Carpinus fangiana
Ciclev10008935m.g Citrus clementina
Ciclev10009245m.g Citrus clementina
CiPaw.03G247300 Carya illinoinensis
CiPaw.04G174100 Carya illinoinensis
CiPaw.07G223700 Carya illinoinensis
CiPaw.08G010800 Carya illinoinensis
ClCG05G016850 Citrullus lanatus
ClCG06G011420 Citrullus lanatus
ClCG08G013410 Citrullus lanatus
COL.COLO4_18864 Corchorus olitorius
COL.COLO4_35137 Corchorus olitorius
Cpa.g.c44394 Carica papaya
Cpa.g.sc217.3 Carica papaya
CsaV3_1G026650 Cucumis sativus L.
CsaV3_2G032150 Cucumis sativus L.
CsaV3_3G046370 Cucumis sativus L.
CSS0019988 Camellia sinensis var. sinensis
DCAR_017798 Daucus carota
Dinv08637 Davidia involucrata
Dinv18212 Davidia involucrata
Dinv30128 Davidia involucrata
Dinv41484 Davidia involucrata
Duzib150G0067 Durio zibethinus
Duzib168G0070 Durio zibethinus
Duzib187G0358 Durio zibethinus
ECA240G0810 Erigeron canadensis
ECA246G0994 Erigeron canadensis
EL10Ac8g18708 Beta vulgaris
Eucgr.C01373 Eucalyptus grandis
Eucgr.C01734 Eucalyptus grandis
Eucgr.L01933 Eucalyptus grandis
FAN15G1324 Fragaria x ananassa
FAN19G3086 Fragaria x ananassa
FAN23G3146 Fragaria x ananassa
FAN26G2042 Fragaria x ananassa
FAN27G0317 Fragaria x ananassa
FAN28G1458 Fragaria x ananassa
FvH4_1g02700 Fragaria vesca
FvH4_2g28970 Fragaria vesca
Glyma.04G066300 Glycine max
Glyma.06G067700 Glycine max
Glyma.13G159000 Glycine max
Glyma.17G112300 Glycine max
Gohir.A05G014900 Gossypium hirsutum
Gohir.A05G053500 Gossypium hirsutum
Gohir.A06G054101 Gossypium hirsutum
Gohir.A07G037300 Gossypium hirsutum
Gohir.D05G016100 Gossypium hirsutum
Gohir.D05G057500 Gossypium hirsutum
Gohir.D06G053100 Gossypium hirsutum
Gohir.D07G041500 Gossypium hirsutum
Gorai.001G043900 Gossypium raimondii
Gorai.009G016200 Gossypium raimondii
Gorai.009G058600 Gossypium raimondii
Gorai.010G062000 Gossypium raimondii
GSVIVG01015573001 Vitis vinifera
GSVIVG01035866001 Vitis vinifera
HanXRQChr06g0180481 Helianthus annuus
HanXRQChr09g0243951 Helianthus annuus
HanXRQChr10g0296781 Helianthus annuus
Haze_21511 Corylus avellana
Haze_25526 Corylus avellana
Hma1.2p1_0497F.1_g166290 Hydrangea macrophylla
Hund26547 Selenicereus undatus
Lalb_Chr07g0179121 Lupinus albus
Lalb_Chr13g0301661 Lupinus albus
Lj1g0003344 Lotus japonicus
Lj4g0010977 Lotus japonicus
LjContig00485g0025035 Lotus japonicus
Lsat_1_v5_gn_5_29420 Lactuca sativa
Lsat_1_v5_gn_7_44161 Lactuca sativa
Lsat_1_v5_gn_8_62421 Lactuca sativa
Manes.06G048600 Manihot esculenta
Manes.14G115100 Manihot esculenta
Manes.16G122601 Manihot esculenta
MBI15_g41547_MAGBIO Magnolia biondii
MD02G1027600 Malus domestica
MD08G1151300 Malus domestica
MD15G1169100 Malus domestica
Medtr3g106850 Medicago truncatula
Medtr4g115075 Medicago truncatula
MELO3C003701.2 Cucumis melo
MELO3C010317.2 Cucumis melo
MELO3C011268.2 Cucumis melo
Migut.E01803 Erythranthe guttata
Migut.K00432 Erythranthe guttata
MSTRG.11613 Avicennia marina
MSTRG.26010 Avicennia marina
MSTRG.26409 Avicennia marina
Nitab4.5_0000028g0050 Nicotiana tabacum
Nitab4.5_0000109g0360 Nicotiana tabacum
Nitab4.5_0000209g0290 Nicotiana tabacum
Nitab4.5_0004887g0040 Nicotiana tabacum
Nitab4.5_0007881g0010 Nicotiana tabacum
Nitab4.5_0009114g0010 Nicotiana tabacum
Nn2g12093 Nelumbo nucifera
Nn8g39513 Nelumbo nucifera
Oeu012625.1 Olea europaea
Oeu053119.1 Olea europaea
Oeu056939.1 Olea europaea
Peaxi162Scf00088g01715 Petunia axillaris
Peaxi162Scf00643g00021 Petunia axillaris
Peaxi162Scf00663g00032 Petunia axillaris
PGR142G4137 Punica granatum
PGSC0003DMG400013765 Solanum tuberosum
PGSC0003DMG400030896 Solanum tuberosum
Phvul.003G167700 Phaseolus vulgaris
Potri.006G066600 Populus trichocarpa
Potri.006G255200 Populus trichocarpa
Potri.018G127800 Populus trichocarpa
Prupe.1G481700 Prunus persica
Prupe.7G247500 Prunus persica
Psat0s594g0080 Pisum sativum
Psat4g037040 Pisum sativum
Psat4g039680 Pisum sativum
Psat5g029240 Pisum sativum
PSO017G5528 Papaver somniferum
PSO170G3805 Papaver somniferum
QL02p021548 Quercus lobata
QL02p089640 Quercus lobata
RcHm_v2.0_Chr2g0087791 Rosa chinensis
RcHm_v2.0_Chr6g0297821 Rosa chinensis
Rhsim02G0201900 Rhododendron simsii
Rhsim03G0250400 Rhododendron simsii
Rhsim03G0250500 Rhododendron simsii
Sabra06G0049500 Salix brachista
Sabra06G0199500 Salix brachista
Sabra18G0108500 Salix brachista
SalBow1G2273 Salvia bowleyana
SalBow1G3219 Salvia bowleyana
SalBow2G0946 Salvia bowleyana
SalBow6G2512 Salvia bowleyana
Sc18g0000410 Simmondsia chinensis
Sed0014797 Sechium edule
Sed0019114 Sechium edule
Sed0027357 Sechium edule
Solyc06g066020.3 Solanum lycopersicum
Solyc08g021820.3 Solanum lycopersicum
Sopen06g024500 Solanum pennellii
Sopen07g003900 Solanum pennellii
Sopen08g009000 Solanum pennellii
Sp7g30030 Schrenkiella parvula
TAR625G1017 Trochodendron aralioides
TAR636G3132 Trochodendron aralioides
THA.LOC104818619 Tarenaya hassleriana
Thecc.09G023900 Theobroma cacao
Thecc.09G130600 Theobroma cacao
Thhalv10027347m.g Eutrema salsugineum
TPR.G26476 Trifolium pratense
TPR.G3144 Trifolium pratense
TWI32G1278 Tripterygium wilfordii
TWI34G0446 Tripterygium wilfordii
TWI63G1260 Tripterygium wilfordii
vmacro06148 Vaccinium macrocarpon
VMungo1215G2932 Vigna mungo
VMungo1309G1431 Vigna mungo

User provided reference genes

Program Settings