Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10970 Brassica napus
A08p25340 Brassica napus
Aa31LG5G21170 Aethionema arabicum
Aa31LG6G11550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2385 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2961 Anthoceros agrestis
Actinidia29606 Actinidia chinensis
Actinidia33112 Actinidia chinensis
Ah.05g170560 Amaranthus hybridus
AL1G42780 Arabidopsis lyrata
AL7G41380 Arabidopsis lyrata
AL7G41530 Arabidopsis lyrata
Aqoxy1G03155 Aquilegia oxysepala
Aqoxy6G00672 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.41SNZJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NU78SD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q67T8J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QI1MS0 Arachis hypogaea
AT1G29060 Arabidopsis thaliana
AT4G14600 Arabidopsis thaliana
ATR0736G080 Amborella trichopoda
Atru.chr13.1061 Acer truncatum
AUR62002400 Chenopodium quinoa
AUR62019000 Chenopodium quinoa
AUR62027843 Chenopodium quinoa
BcaB03g13908 Brassica carinata
BcaB07g32485 Brassica carinata
BcaC05g26921 Brassica carinata
BcaC06g35396 Brassica carinata
BcaNung06434 Brassica carinata
BcaNung06754 Brassica carinata
BolC3t19806H Brassica oleracea
BolC5t31494H Brassica oleracea
BolC7t42159H Brassica oleracea
BraA07t28888Z Brassica rapa
BraA08t34486Z Brassica rapa
C03p75500 Brassica napus
C05p27740 Brassica napus
CAN.G1538.2 Capsicum annuum
CAN.G460.5 Capsicum annuum
CANSAT25G0001 Cannabis sativa
CARHR028280 Cardamine hirsuta
Carub.0001s2726 Capsella rubella
Ca_05384_v3 Cicer arietinum L.
Ca_16024_v3 Cicer arietinum L.
Cc04_g11820 Coffea canephora
Cc10_g15500 Coffea canephora
CDE04G1284 Ceratophyllum demersum
CDE05G3211 Ceratophyllum demersum
CDE05G3432 Ceratophyllum demersum
Cfa013710 Carpinus fangiana
Ciclev10002815m.g Citrus clementina
CiPaw.01G047900 Carya illinoinensis
CiPaw.07G169400 Carya illinoinensis
ClCG11G014400 Citrullus lanatus
COL.COLO4_11964 Corchorus olitorius
COL.COLO4_27316 Corchorus olitorius
Cpa.g.sc36.201 Carica papaya
Cre09.g405600 Chlamydomonas reinhardtii
CsaV3_3G047800 Cucumis sativus L.
CSS0021893 Camellia sinensis var. sinensis
CSS0040126 Camellia sinensis var. sinensis
CSS0040517 Camellia sinensis var. sinensis
CSS0047709 Camellia sinensis var. sinensis
DCAR_001735 Daucus carota
Dinv42647 Davidia involucrata
Dinv44828 Davidia involucrata
Duzib041G0585 Durio zibethinus
Duzib093G0958 Durio zibethinus
Duzib116G0544 Durio zibethinus
ECA234G0792 Erigeron canadensis
ECA247G1419 Erigeron canadensis
EL10Ac3g06094 Beta vulgaris
Eucgr.F00400 Eucalyptus grandis
FAN04G3145 Fragaria x ananassa
FAN08G1899 Fragaria x ananassa
FAN13G2229 Fragaria x ananassa
FAN18G2789 Fragaria x ananassa
FvH4_5g35960 Fragaria vesca
Glyma.02G211500 Glycine max
Glyma.04G097000 Glycine max
Glyma.06G098800 Glycine max
Glyma.14G179100 Glycine max
Gohir.A05G356050 Gossypium hirsutum
Gohir.A06G032664 Gossypium hirsutum
Gohir.A11G205600 Gossypium hirsutum
Gohir.D06G033200 Gossypium hirsutum
Gohir.D11G218000 Gossypium hirsutum
Gorai.007G236000 Gossypium raimondii
Gorai.010G036600 Gossypium raimondii
GSVIVG01003618001 Vitis vinifera
GSVIVG01009122001 Vitis vinifera
HanXRQChr02g0046851 Helianthus annuus
HanXRQChr08g0226211 Helianthus annuus
Haze_15046 Corylus avellana
Haze_22354 Corylus avellana
Hma1.2p1_0961F.1_g241695 Hydrangea macrophylla
Hma1.2p1_0961F.1_g241710 Hydrangea macrophylla
HPP92_023309 Vanilla planifolia
Hund16878 Selenicereus undatus
Lalb_Chr10g0102641 Lupinus albus
Lalb_Chr23g0270201 Lupinus albus
Lalb_Chr23g0270301 Lupinus albus
Lj1g0000615 Lotus japonicus
Lj1g0025059 Lotus japonicus
Lsat_1_v5_gn_1_2480 Lactuca sativa
Lsat_1_v5_gn_6_105381 Lactuca sativa
Manes.02G147700 Manihot esculenta
Manes.18G062100 Manihot esculenta
Mapoly0006s0109 Marchantia polymorpha
MBI02_g18294_MAGBIO Magnolia biondii
MBI06_g18789_MAGBIO Magnolia biondii
MCO11G826 Micromonas commoda
MD08G1191600 Malus domestica
MD15G1380400 Malus domestica
Medtr3g099773 Medicago truncatula
Medtr5g065550 Medicago truncatula
MELO3C003542.2 Cucumis melo
Migut.D01990 Erythranthe guttata
Migut.O00140 Erythranthe guttata
MSTRG.11484 Avicennia marina
MSTRG.9688 Avicennia marina
Nitab4.5_0000008g0680 Nicotiana tabacum
Nitab4.5_0001078g0070 Nicotiana tabacum
Nitab4.5_0001984g0080 Nicotiana tabacum
Nitab4.5_0007681g0020 Nicotiana tabacum
Nitab4.5_0013778g0010 Nicotiana tabacum
Nn1g05484 Nelumbo nucifera
Nn1g08254 Nelumbo nucifera
Oeu013165.1 Olea europaea
Oeu023447.1 Olea europaea
Oeu024713.1 Olea europaea
Os03g0187700 Oryza sativa ssp. japonica
Os07g0577900 Oryza sativa ssp. japonica
Peaxi162Scf00139g00825 Petunia axillaris
Peaxi162Scf00725g00536 Petunia axillaris
PGR031G1594 Punica granatum
PGSC0003DMG400024178 Solanum tuberosum
PGSC0003DMG401002119 Solanum tuberosum
Phvul.008G178700 Phaseolus vulgaris
Phvul.009G034800 Phaseolus vulgaris
Potri.002G102400 Populus trichocarpa
Potri.005G159600 Populus trichocarpa
Pp3c6_21020 Physcomitrium patens
Pp3c7_10130 Physcomitrium patens
PRCOL_00003995 Prasinoderma coloniale
Prupe.1G526600 Prunus persica
Psat2g066800 Pisum sativum
Psat5g050000 Pisum sativum
PSO675G6040 Papaver somniferum
QL06p047634 Quercus lobata
QL09p016915 Quercus lobata
RcHm_v2.0_Chr2g0095271 Rosa chinensis
RcHm_v2.0_Chr6g0264581 Rosa chinensis
RcHm_v2.0_Chr7g0237701 Rosa chinensis
Rhsim06G0075200 Rhododendron simsii
Rhsim07G0209200 Rhododendron simsii
Sabra05G0121300 Salix brachista
Sabra17G0067100 Salix brachista
SalBow6G0357 Salvia bowleyana
SalBow6G2258 Salvia bowleyana
SalBow6G4055 Salvia bowleyana
SalBow7G2649 Salvia bowleyana
SalBow8G4833 Salvia bowleyana
Sc01g0000960 Simmondsia chinensis
Sc23g0000530 Simmondsia chinensis
Sed0006262 Sechium edule
Sed0022834 Sechium edule
SEGI_15699 Sequoiadendron giganteum
SEGI_39968 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14731 Striga asiatica
SGA_v2.0_scaffold5G02749 Striga asiatica
SMO141G0171 Selaginella moellendorffii
Solyc02g063075.1 Solanum lycopersicum
Solyc04g074940.4 Solanum lycopersicum
Sopen02g014150 Solanum pennellii
Sopen04g029890 Solanum pennellii
Sp1g25000 Schrenkiella parvula
TAR381G0359 Trochodendron aralioides
TAR625G0842 Trochodendron aralioides
THA.LOC104812634 Tarenaya hassleriana
THA.LOC104820588 Tarenaya hassleriana
Thecc.01G093400 Theobroma cacao
Thecc.08G066000 Theobroma cacao
Thhalv10009065m.g Eutrema salsugineum
TPR.G6376 Trifolium pratense
TWI12G0801 Tripterygium wilfordii
TWI56G0839 Tripterygium wilfordii
TWI74G0452 Tripterygium wilfordii
vmacro04682 Vaccinium macrocarpon
vmacro21941 Vaccinium macrocarpon
VMungo0647G0300 Vigna mungo
Zm00001eb107620 Zea mays
Zm00001eb325480 Zea mays

User provided reference genes

Program Settings