Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p28660 Brassica napus
A08p08290 Brassica napus
A09p32150 Brassica napus
Aa31LG6G8390 Aethionema arabicum
Aa31LG9G14950 Aethionema arabicum
Actinidia23313 Actinidia chinensis
Ah.05g172830 Amaranthus hybridus
Ah.16g109760 Amaranthus hybridus
AL1G48860 Arabidopsis lyrata
Aqoxy5G02594 Aquilegia oxysepala
Aqoxy5G02606 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.37WGC5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CNY52L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QZI8B0 Arachis hypogaea
AT1G34300 Arabidopsis thaliana
ATR0584G003 Amborella trichopoda
ATR0584G238 Amborella trichopoda
Atru.chr13.1864 Acer truncatum
AUR62004671 Chenopodium quinoa
AUR62004672 Chenopodium quinoa
AUR62023590 Chenopodium quinoa
AUR62023591 Chenopodium quinoa
BcaB01g02782 Brassica carinata
BcaB04g17887 Brassica carinata
BcaB07g33135 Brassica carinata
BcaC01g04709 Brassica carinata
BcaC08g43330 Brassica carinata
BcaC08g43788 Brassica carinata
BolC3t15776H Brassica oleracea
BolC6t36298H Brassica oleracea
BolC8t47868H Brassica oleracea
BraA03t12065Z Brassica rapa
BraA06t23437Z Brassica rapa
BraA08t32847Z Brassica rapa
BraA09t38761Z Brassica rapa
C03p34650 Brassica napus
C06p11690 Brassica napus
CAN.G571.3 Capsicum annuum
CANSAT25G1886 Cannabis sativa
CARHR033770 Cardamine hirsuta
Carub.0001s3245 Capsella rubella
Ca_10631_v3 Cicer arietinum L.
Ca_26648_v3 Cicer arietinum L.
Cc00_g12500 Coffea canephora
Cc03_g13490 Coffea canephora
CDE06G1163 Ceratophyllum demersum
Cfa018213 Carpinus fangiana
Cfa018214 Carpinus fangiana
Ciclev10003606m.g Citrus clementina
Ciclev10025750m.g Citrus clementina
CiPaw.15G005900 Carya illinoinensis
CiPaw.15G006000 Carya illinoinensis
CiPaw.16G005200 Carya illinoinensis
ClCG08G008710 Citrullus lanatus
COL.COLO4_07151 Corchorus olitorius
COL.COLO4_35753 Corchorus olitorius
Cpa.g.sc66.110 Carica papaya
CsaV3_6G004740 Cucumis sativus L.
CSS0028278 Camellia sinensis var. sinensis
CSS0036562 Camellia sinensis var. sinensis
CSS0041724 Camellia sinensis var. sinensis
DCAR_014271 Daucus carota
Dinv04174 Davidia involucrata
Dinv38040 Davidia involucrata
Dinv41676 Davidia involucrata
Dinv41677 Davidia involucrata
Duzib116G0534 Durio zibethinus
Duzib116G0598 Durio zibethinus
Duzib211G0694 Durio zibethinus
ECA247G3329 Erigeron canadensis
EL10Ac1g00058 Beta vulgaris
Eucgr.F04146 Eucalyptus grandis
Eucgr.F04152 Eucalyptus grandis
FAN20G0659 Fragaria x ananassa
FAN24G0810 Fragaria x ananassa
FAN27G0433 Fragaria x ananassa
FvH4_2g12390 Fragaria vesca
Glyma.02G075600 Glycine max
Glyma.16G157400 Glycine max
Glyma.16G157500 Glycine max
Glyma.20G173600 Glycine max
Gohir.A02G061300 Gossypium hirsutum
Gohir.A03G047500 Gossypium hirsutum
Gohir.D02G066700 Gossypium hirsutum
Gohir.D02G066800 Gossypium hirsutum
Gohir.D03G119600 Gossypium hirsutum
Gohir.D09G113566 Gossypium hirsutum
Gorai.003G126000 Gossypium raimondii
Gorai.005G075600 Gossypium raimondii
Gorai.005G075700 Gossypium raimondii
Gorai.006G131200 Gossypium raimondii
GSVIVG01036817001 Vitis vinifera
HanXRQChr04g0111601 Helianthus annuus
Haze_17892 Corylus avellana
Haze_17893 Corylus avellana
Hma1.2p1_1102F.1_g257220 Hydrangea macrophylla
Hma1.2p1_1102F.1_g257240 Hydrangea macrophylla
HPP92_025216 Vanilla planifolia
Lalb_Chr01g0009931 Lupinus albus
Lj2g0020591 Lotus japonicus
Lj4P518T10 Lonicera japonica
Lj4P518T15 Lonicera japonica
Lj5g0016167 Lotus japonicus
Lsat_1_v5_gn_1_6641 Lactuca sativa
Manes.02G189400 Manihot esculenta
Manes.13G148400 Manihot esculenta
Manes.18G098200 Manihot esculenta
MBI09_g01925_MAGBIO Magnolia biondii
MD05G1039400 Malus domestica
MD05G1039500 Malus domestica
MD10G1044900 Malus domestica
Medtr6g043510 Medicago truncatula
Medtr6g043790 Medicago truncatula
MELO3C019944.2 Cucumis melo
Migut.C01210 Erythranthe guttata
MSTRG.1495 Avicennia marina
MSTRG.25426 Avicennia marina
MSTRG.25428 Avicennia marina
Nitab4.5_0000923g0140 Nicotiana tabacum
Nitab4.5_0003302g0070 Nicotiana tabacum
Nitab4.5_0006035g0010 Nicotiana tabacum
Nn8g40937 Nelumbo nucifera
Oeu004778.1 Olea europaea
Oeu004779.1 Olea europaea
Oeu039596.1 Olea europaea
Os03g0838100 Oryza sativa ssp. japonica
Peaxi162Scf00228g00036 Petunia axillaris
PGR083G0258 Punica granatum
PGR102G3316 Punica granatum
PGSC0003DMG400030209 Solanum tuberosum
Phvul.004G085800 Phaseolus vulgaris
Potri.013G115700 Populus trichocarpa
Potri.013G115800 Populus trichocarpa
Potri.019G086200 Populus trichocarpa
Potri.019G086300 Populus trichocarpa
Potri.019G086400 Populus trichocarpa
Pp3c16_21640 Physcomitrium patens
Prupe.8G051900 Prunus persica
Psat0ss3101g0040 Pisum sativum
PSO017G3394 Papaver somniferum
PSO017G7015 Papaver somniferum
PSO063G2177 Papaver somniferum
PSO063G3926 Papaver somniferum
QL02p034403 Quercus lobata
QL02p034442 Quercus lobata
QL12p025716 Quercus lobata
RcHm_v2.0_Chr6g0272421 Rosa chinensis
Rhsim06G0100200 Rhododendron simsii
Rhsim11G0063500 Rhododendron simsii
Rhsim11G0063600 Rhododendron simsii
Rhsim11G0063700 Rhododendron simsii
Sabra13G0098000 Salix brachista
Sabra19G0096800 Salix brachista
Sabra19G0096900 Salix brachista
SalBow7G0955 Salvia bowleyana
SalBow7G4436 Salvia bowleyana
Sc01g0001640 Simmondsia chinensis
Sc23g0001070 Simmondsia chinensis
Sed0009085 Sechium edule
Sed0009498 Sechium edule
SEGI_03853 Sequoiadendron giganteum
SEGI_13537 Sequoiadendron giganteum
SEGI_15768 Sequoiadendron giganteum
SEGI_16745 Sequoiadendron giganteum
SEGI_22802 Sequoiadendron giganteum
SEGI_22866 Sequoiadendron giganteum
SEGI_26899 Sequoiadendron giganteum
SEGI_29691 Sequoiadendron giganteum
SEGI_36724 Sequoiadendron giganteum
SEGI_40171 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32454 Striga asiatica
SGA_v2.0_scaffold24G10524 Striga asiatica
SMO361G0187 Selaginella moellendorffii
SMO364G0504 Selaginella moellendorffii
SMO364G0790 Selaginella moellendorffii
Solyc11g013880.1 Solanum lycopersicum
Sopen11g008800 Solanum pennellii
Sp1g29520 Schrenkiella parvula
Sp6g07970 Schrenkiella parvula
TAR381G0198 Trochodendron aralioides
TAR628G0712 Trochodendron aralioides
THA.LOC104813095 Tarenaya hassleriana
THA.LOC104816209 Tarenaya hassleriana
Thecc.08G199600 Theobroma cacao
Thecc.08G199700 Theobroma cacao
Thecc.08G199800 Theobroma cacao
Thecc.08G199900 Theobroma cacao
Thhalv10006801m.g Eutrema salsugineum
Thhalv10027652m.g Eutrema salsugineum
Thhalv10028444m.g Eutrema salsugineum
TPR.G15345 Trifolium pratense
TWI34G0484 Tripterygium wilfordii
TWI34G0818 Tripterygium wilfordii
VMungo0464G0004 Vigna mungo
Zm00001eb063900 Zea mays

User provided reference genes

Program Settings