Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p30870 Brassica napus
A06p45270 Brassica napus
A09p22870 Brassica napus
Aa31LG6G330 Aethionema arabicum
Aa31sc58G60 Aethionema arabicum
Aa31sc64G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3906 Anthoceros agrestis
Actinidia02187 Actinidia chinensis
Actinidia10860 Actinidia chinensis
Actinidia25904 Actinidia chinensis
Ah.07g199070 Amaranthus hybridus
AL7G37010 Arabidopsis lyrata
AL7G37020 Arabidopsis lyrata
AL8G10960 Arabidopsis lyrata
Aqoxy3G02682 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0MYH4H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2KFK0B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.68ECIB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QND09G Arachis hypogaea
AT4G17580 Arabidopsis thaliana
AT5G47120 Arabidopsis thaliana
AT5G47130 Arabidopsis thaliana
ATR0665G511 Amborella trichopoda
ATR0684G045 Amborella trichopoda
Atru.chr9.1224 Acer truncatum
AUR62007154 Chenopodium quinoa
AUR62018857 Chenopodium quinoa
BcaB07g30791 Brassica carinata
BcaC03g16944 Brassica carinata
BcaC04g21644 Brassica carinata
BcaC06g31414 Brassica carinata
BolC2t10881H Brassica oleracea
BolC9t55809H Brassica oleracea
BraA02t08100Z Brassica rapa
BraA06t27399Z Brassica rapa
BraA09t37889Z Brassica rapa
C02p48480 Brassica napus
C09p29450 Brassica napus
CAN.G761.18 Capsicum annuum
CANSAT21G2002 Cannabis sativa
CARHR174270 Cardamine hirsuta
CARHR224290 Cardamine hirsuta
CARHR224300 Cardamine hirsuta
Carub.0007s2380 Capsella rubella
Carub.0007s2381 Capsella rubella
Carub.0008s0063 Capsella rubella
Ca_22007_v3 Cicer arietinum L.
Ca_24608_v3 Cicer arietinum L.
CBR_g30750 Chara braunii
Cc08_g11460 Coffea canephora
CDE04G2711 Ceratophyllum demersum
CDE12G0326 Ceratophyllum demersum
Cfa012672 Carpinus fangiana
Ciclev10021901m.g Citrus clementina
CiPaw.11G069700 Carya illinoinensis
CiPaw.12G047300 Carya illinoinensis
ClCG09G012780 Citrullus lanatus
ClCG09G012790 Citrullus lanatus
COL.COLO4_04149 Corchorus olitorius
COL.COLO4_07510 Corchorus olitorius
COL.COLO4_09675 Corchorus olitorius
COL.COLO4_14298 Corchorus olitorius
COL.COLO4_34791 Corchorus olitorius
COL.COLO4_34903 Corchorus olitorius
COL.COLO4_37177 Corchorus olitorius
Cpa.g.sc89.3 Carica papaya
Cre01.g061807 Chlamydomonas reinhardtii
CsaV3_3G049840 Cucumis sativus L.
CsaV3_3G049850 Cucumis sativus L.
CSS0020501 Camellia sinensis var. sinensis
CSS0031131 Camellia sinensis var. sinensis
DCAR_000212 Daucus carota
Dinv24083 Davidia involucrata
Dinv28867 Davidia involucrata
Duzib068G0289 Durio zibethinus
Duzib084G1389 Durio zibethinus
Duzib205G0006 Durio zibethinus
ECA233G1214 Erigeron canadensis
ECA240G1580 Erigeron canadensis
EL10Ac5g12286 Beta vulgaris
Eucgr.E00365 Eucalyptus grandis
FAN13G0033 Fragaria x ananassa
FAN13G1850 Fragaria x ananassa
FAN18G0105 Fragaria x ananassa
FvH4_5g20220 Fragaria vesca
Glyma.01G205200 Glycine max
Glyma.05G064700 Glycine max
Glyma.11G037700 Glycine max
Glyma.17G146500 Glycine max
Gohir.A03G004800 Gossypium hirsutum
Gohir.A08G165400 Gossypium hirsutum
Gohir.A11G028900 Gossypium hirsutum
Gohir.A12G213700 Gossypium hirsutum
Gohir.D08G184100 Gossypium hirsutum
Gohir.D11G027400 Gossypium hirsutum
Gohir.D12G216300 Gossypium hirsutum
Gorai.004G193400 Gossypium raimondii
Gorai.007G029900 Gossypium raimondii
Gorai.008G231700 Gossypium raimondii
GSVIVG01005380001 Vitis vinifera
HanXRQChr03g0089811 Helianthus annuus
HanXRQChr13g0418211 Helianthus annuus
Haze_07974 Corylus avellana
Hma1.2p1_0840F.1_g226550 Hydrangea macrophylla
Hma1.2p1_1008F.1_g247170 Hydrangea macrophylla
Hma1.2p1_3142F.1_g333090 Hydrangea macrophylla
HPP92_022270 Vanilla planifolia
HPP92_022395 Vanilla planifolia
Hund11323 Selenicereus undatus
Lalb_Chr09g0324201 Lupinus albus
Lalb_Chr16g0379371 Lupinus albus
Lj2C228T1 Lonicera japonica
Lj2g0011904 Lotus japonicus
Lj4g0000920 Lotus japonicus
Lj8A275T73 Lonicera japonica
Lsat_1_v5_gn_0_33340 Lactuca sativa
Lsat_1_v5_gn_6_93780 Lactuca sativa
Lsat_1_v5_gn_6_94980 Lactuca sativa
Manes.01G087400 Manihot esculenta
Manes.02G044200 Manihot esculenta
Mapoly0020s0020 Marchantia polymorpha
MD04G1051800 Malus domestica
MD06G1048300 Malus domestica
Medtr4g099430 Medicago truncatula
Medtr5g013340 Medicago truncatula
Medtr6g083250 Medicago truncatula
MELO3C003331.2 Cucumis melo
MELO3C003332.2 Cucumis melo
Migut.E00823 Erythranthe guttata
MSTRG.13775 Avicennia marina
Nitab4.5_0000185g0160 Nicotiana tabacum
Nitab4.5_0000500g0100 Nicotiana tabacum
Nitab4.5_0006594g0040 Nicotiana tabacum
Nitab4.5_0007628g0040 Nicotiana tabacum
Nn1g00814 Nelumbo nucifera
Nn6g33792 Nelumbo nucifera
Oeu004046.1 Olea europaea
Oeu017210.1 Olea europaea
Oeu037378.2 Olea europaea
Oeu054279.1 Olea europaea
Os02g0125300 Oryza sativa ssp. japonica
Peaxi162Scf00102g00836 Petunia axillaris
Peaxi162Scf00446g00018 Petunia axillaris
Peaxi162Scf00650g00015 Petunia axillaris
Peaxi162Scf00650g00227 Petunia axillaris
PGR042G0532 Punica granatum
PGSC0003DMG400026250 Solanum tuberosum
Phvul.002G001400 Phaseolus vulgaris
Phvul.003G224400 Phaseolus vulgaris
Potri.001G151800 Populus trichocarpa
Potri.003G082700 Populus trichocarpa
Pp3c1_12850 Physcomitrium patens
Prupe.5G058500 Prunus persica
Psat2g176040 Pisum sativum
Psat4g075160 Pisum sativum
PSO063G6369 Papaver somniferum
PSO782G2969 Papaver somniferum
QL12p009056 Quercus lobata
RcHm_v2.0_Chr6g0267631 Rosa chinensis
RcHm_v2.0_Chr7g0205291 Rosa chinensis
Rhsim07G0118600 Rhododendron simsii
Rhsim07G0118800 Rhododendron simsii
Rhsim09G0059100 Rhododendron simsii
Sabra01G0121500 Salix brachista
Sabra03G0053400 Salix brachista
SalBow1G3000 Salvia bowleyana
SalBow1G5297 Salvia bowleyana
SalBow1G6888 Salvia bowleyana
Sc22g0001110 Simmondsia chinensis
Sed0002752 Sechium edule
Sed0004432 Sechium edule
SEGI_13569 Sequoiadendron giganteum
SGA_v2.0_scaffold6G03164 Striga asiatica
SHI07818 Sapria himalayana
SMO116G0185 Selaginella moellendorffii
Solyc08g077980.4 Solanum lycopersicum
Sopen08g026490 Solanum pennellii
Sp2g11930 Schrenkiella parvula
TAR004G0001 Trochodendron aralioides
TAR374G0594 Trochodendron aralioides
TAR375G0233 Trochodendron aralioides
TAR629G3463 Trochodendron aralioides
THA.LOC104798354 Tarenaya hassleriana
THA.LOC104806682 Tarenaya hassleriana
Thecc.03G242800 Theobroma cacao
Thhalv10001130m.g Eutrema salsugineum
TPR.G31430 Trifolium pratense
TWI15G0629 Tripterygium wilfordii
TWI60G0953 Tripterygium wilfordii
unitig_22.g5495 Utricularia gibba
vmacro00044 Vaccinium macrocarpon
vmacro14127 Vaccinium macrocarpon
VMungo0251G2763 Vigna mungo
VMungo1215G2437 Vigna mungo
Zm00001eb208690 Zea mays
Zm00001eb230820 Zea mays
Zm00001eb379560 Zea mays

User provided reference genes

Program Settings