Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03650 Brassica napus
A03p00390 Brassica napus
A10p33660 Brassica napus
Aa31LG1G22850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.713 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.715 Anthoceros agrestis
Actinidia01107 Actinidia chinensis
Actinidia05349 Actinidia chinensis
Actinidia13774 Actinidia chinensis
Actinidia29123 Actinidia chinensis
Ah.02g114930 Amaranthus hybridus
AL6G10970 Arabidopsis lyrata
Aqoxy2G00958 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EK5UG7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FDLX2Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6AUEE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YIK7D0 Arachis hypogaea
AT5G01220 Arabidopsis thaliana
ATR0618G034 Amborella trichopoda
Atru.chr8.2207 Acer truncatum
AUR62020689 Chenopodium quinoa
AUR62025812 Chenopodium quinoa
BcaB01g06094 Brassica carinata
BcaC03g15346 Brassica carinata
BcaC04g19331 Brassica carinata
BcaC06g31965 Brassica carinata
BcaC06g31967 Brassica carinata
BcaC07g38722 Brassica carinata
BcaNung02769 Brassica carinata
BolC3t12621H Brassica oleracea
BolC9t60189H Brassica oleracea
BraA03t09430Z Brassica rapa
BraA10t45397Z Brassica rapa
C02p29520 Brassica napus
C03p00550 Brassica napus
C09p67290 Brassica napus
C09p74570 Brassica napus
CAN.G1297.6 Capsicum annuum
CAN.G355.3 Capsicum annuum
CANSAT35G1853 Cannabis sativa
CARHR211550 Cardamine hirsuta
Carub.0006s0067 Capsella rubella
Ca_07617_v3 Cicer arietinum L.
Ca_20313_v3 Cicer arietinum L.
CBR_g3329 Chara braunii
Cc06_g01590 Coffea canephora
CDE02G3708 Ceratophyllum demersum
Cfa017247 Carpinus fangiana
Cfa022298 Carpinus fangiana
Ciclev10011473m.g Citrus clementina
CiPaw.09G207100 Carya illinoinensis
CiPaw.10G154700 Carya illinoinensis
ClCG10G021890 Citrullus lanatus
COL.COLO4_14573 Corchorus olitorius
Cpa.g.sc163.3 Carica papaya
Cre01.g038550 Chlamydomonas reinhardtii
Cre16.g689150 Chlamydomonas reinhardtii
CsaV3_3G034100 Cucumis sativus L.
CSS0025489 Camellia sinensis var. sinensis
CSS0046394 Camellia sinensis var. sinensis
DCAR_024027 Daucus carota
DCAR_028819 Daucus carota
Dinv14534 Davidia involucrata
Dinv37075 Davidia involucrata
Duzib093G0826 Durio zibethinus
Duzib106G1409 Durio zibethinus
Duzib128G1405 Durio zibethinus
ECA247G2610 Erigeron canadensis
ECA248G0513 Erigeron canadensis
EL10Ac5g11512 Beta vulgaris
EL10Ac5g11530 Beta vulgaris
Eucgr.A00516 Eucalyptus grandis
FAN02G2254 Fragaria x ananassa
FAN05G4401 Fragaria x ananassa
FAN09G0987 Fragaria x ananassa
FAN14G4021 Fragaria x ananassa
FAN14G4776 Fragaria x ananassa
FvH4_6g11930 Fragaria vesca
Glyma.01G113000 Glycine max
Glyma.03G078300 Glycine max
Glyma.07G146400 Glycine max
Glyma.18G197600 Glycine max
Gohir.A01G225800 Gossypium hirsutum
Gohir.A04G088800 Gossypium hirsutum
Gohir.D01G215500 Gossypium hirsutum
Gohir.D04G129200 Gossypium hirsutum
Gorai.002G261700 Gossypium raimondii
Gorai.012G112200 Gossypium raimondii
GSVIVG01033998001 Vitis vinifera
HanXRQChr04g0127691 Helianthus annuus
HanXRQChr10g0287061 Helianthus annuus
HanXRQChr11g0329601 Helianthus annuus
Haze_20961 Corylus avellana
Hma1.2p1_0244F.1_g101280 Hydrangea macrophylla
HPP92_012629 Vanilla planifolia
HPP92_019420 Vanilla planifolia
Hund22726 Selenicereus undatus
Lalb_Chr03g0043071 Lupinus albus
Lalb_Chr07g0193451 Lupinus albus
Lalb_Chr13g0291251 Lupinus albus
Lj1g0014660 Lotus japonicus
Lj2C81T6 Lonicera japonica
Lj3C956T2 Lonicera japonica
Lj3g0001695 Lotus japonicus
Lsat_1_v5_gn_5_155081 Lactuca sativa
Lsat_1_v5_gn_9_36000 Lactuca sativa
Manes.08G089250 Manihot esculenta
Manes.09G103000 Manihot esculenta
Mapoly0129s0040 Marchantia polymorpha
MBI14_g04426_MAGBIO Magnolia biondii
MCO07G378 Micromonas commoda
MD04G1148000 Malus domestica
MD12G1161400 Malus domestica
Medtr4g015250 Medicago truncatula
Medtr4g015260 Medicago truncatula
Medtr7g067340 Medicago truncatula
MELO3C009186.2 Cucumis melo
Migut.J00201 Erythranthe guttata
Migut.L01997 Erythranthe guttata
MSTRG.19023 Avicennia marina
Nitab4.5_0000008g0880 Nicotiana tabacum
Nitab4.5_0000652g0220 Nicotiana tabacum
Nitab4.5_0004030g0030 Nicotiana tabacum
Nitab4.5_0004912g0010 Nicotiana tabacum
Nn2g11403 Nelumbo nucifera
Nn2g13633 Nelumbo nucifera
Oeu015017.1 Olea europaea
Oeu030526.1 Olea europaea
Os01g0142300 Oryza sativa ssp. japonica
Os03g0265100 Oryza sativa ssp. japonica
Os07g0100300 Oryza sativa ssp. japonica
Peaxi162Scf00009g01921 Petunia axillaris
Peaxi162Scf00141g00615 Petunia axillaris
PGR031G3689 Punica granatum
PGSC0003DMG400011091 Solanum tuberosum
PGSC0003DMG400020317 Solanum tuberosum
Phvul.008G106900 Phaseolus vulgaris
Phvul.010G005100 Phaseolus vulgaris
Potri.006G097600 Populus trichocarpa
Potri.016G112600 Populus trichocarpa
Pp3c15_4410 Physcomitrium patens
Pp3c9_8520 Physcomitrium patens
PRCOL_00001337 Prasinoderma coloniale
Prupe.6G271800 Prunus persica
Psat3g130760 Pisum sativum
Psat7g247920 Pisum sativum
PSO339G6012 Papaver somniferum
PSO801G0661 Papaver somniferum
QL07p036025 Quercus lobata
RcHm_v2.0_Chr3g0463701 Rosa chinensis
Rhsim04G0166600 Rhododendron simsii
Rhsim05G0206900 Rhododendron simsii
Sabra06G0075100 Salix brachista
Sabra16G0108300 Salix brachista
SalBow4G1026 Salvia bowleyana
SalBow4G2524 Salvia bowleyana
SalBow5G3819 Salvia bowleyana
SalBow5G4142 Salvia bowleyana
Sc01g0006660 Simmondsia chinensis
Sed0002007 Sechium edule
Sed0023271 Sechium edule
SEGI_03332 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30519 Striga asiatica
SGA_v2.0_scaffold110G31270 Striga asiatica
SGA_v2.0_scaffold85G26755 Striga asiatica
SMO118G0052 Selaginella moellendorffii
Solyc09g014300.3 Solanum lycopersicum
Solyc10g085100.2 Solanum lycopersicum
Sopen09g007150 Solanum pennellii
Sopen10g034560 Solanum pennellii
Sp1g36510 Schrenkiella parvula
Sp6g40570 Schrenkiella parvula
TAR369G0131 Trochodendron aralioides
TAR623G0363 Trochodendron aralioides
TAR623G1156 Trochodendron aralioides
THA.LOC104823284 Tarenaya hassleriana
THA.LOC104827042 Tarenaya hassleriana
Thecc.05G020500 Theobroma cacao
Thhalv10013276m.g Eutrema salsugineum
TPR.G13200 Trifolium pratense
TPR.G1566 Trifolium pratense
TPR.G1586 Trifolium pratense
TPR.G15967 Trifolium pratense
TPR.G15969 Trifolium pratense
TPR.G20880 Trifolium pratense
TPR.G33937 Trifolium pratense
TWI53G0359 Tripterygium wilfordii
TWI77G0412 Tripterygium wilfordii
unitig_0.g1457 Utricularia gibba
unitig_27.g24826 Utricularia gibba
unitig_88.g27657 Utricularia gibba
vmacro08599 Vaccinium macrocarpon
vmacro22553 Vaccinium macrocarpon
VMungo0331G1068 Vigna mungo
Zm00001eb011720 Zea mays
Zm00001eb297970 Zea mays
Zm00001eb335670 Zea mays
Zm00001eb398000 Zea mays

User provided reference genes

Program Settings