Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14230 Brassica napus
A09p27250 Brassica napus
Aa31LG6G5010 Aethionema arabicum
Aa31LG9G10590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3893 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1756 Anthoceros agrestis
Actinidia05234 Actinidia chinensis
Actinidia14499 Actinidia chinensis
Actinidia27413 Actinidia chinensis
Ah.12g057800 Amaranthus hybridus
AL7G30560 Arabidopsis lyrata
Aqoxy5G03952 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18T4MA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HGX6IC Arachis hypogaea
AT4G11860 Arabidopsis thaliana
AT4G22960 Arabidopsis thaliana
ATR0661G488 Amborella trichopoda
Atru.chr9.1507 Acer truncatum
AUR62010575 Chenopodium quinoa
AUR62017315 Chenopodium quinoa
BcaB01g01683 Brassica carinata
BcaB01g02667 Brassica carinata
BcaB01g02668 Brassica carinata
BcaC04g21168 Brassica carinata
BcaC09g51049 Brassica carinata
BcaNung01008 Brassica carinata
BolC1t01690H Brassica oleracea
BolC9t56305H Brassica oleracea
BraA01t01370Z Brassica rapa
BraA03t14599Z Brassica rapa
BraA03t14615Z Brassica rapa
BraA09t38293Z Brassica rapa
C01p17500 Brassica napus
C09p34580 Brassica napus
CAN.G981.56 Capsicum annuum
CANSAT21G1884 Cannabis sativa
CARHR254440 Cardamine hirsuta
Carub.0006s3095 Capsella rubella
Carub.0007s1831 Capsella rubella
Ca_06667_v3 Cicer arietinum L.
CBR_g38139 Chara braunii
Cc08_g13790 Coffea canephora
CDE04G0877 Ceratophyllum demersum
CDE12G0302 Ceratophyllum demersum
CDE12G0774 Ceratophyllum demersum
Cfa012079 Carpinus fangiana
Cfa025567 Carpinus fangiana
Ciclev10019075m.g Citrus clementina
CiPaw.11G142600 Carya illinoinensis
CiPaw.12G100200 Carya illinoinensis
ClCG01G003270 Citrullus lanatus
COL.COLO4_11055 Corchorus olitorius
COL.COLO4_23793 Corchorus olitorius
Cpa.g.sc29.32 Carica papaya
Cpa.g.sc29.33 Carica papaya
Cre06.g304850 Chlamydomonas reinhardtii
CsaV3_4G012220 Cucumis sativus L.
CsaV3_5G003350 Cucumis sativus L.
CSS0021110 Camellia sinensis var. sinensis
CSS0044016 Camellia sinensis var. sinensis
DCAR_006771 Daucus carota
DCAR_008431 Daucus carota
DCAR_022882 Daucus carota
DCAR_022883 Daucus carota
Dinv37703 Davidia involucrata
Dinv39033 Davidia involucrata
Duzib068G0926 Durio zibethinus
Duzib084G0706 Durio zibethinus
Duzib205G0992 Durio zibethinus
ECA233G2019 Erigeron canadensis
ECA240G1577 Erigeron canadensis
ECA240G3998 Erigeron canadensis
EL10Ac5g12710 Beta vulgaris
Eucgr.D01936 Eucalyptus grandis
Eucgr.D01937 Eucalyptus grandis
Eucgr.D01938 Eucalyptus grandis
FAN04G3242 Fragaria x ananassa
FAN08G2451 Fragaria x ananassa
FAN09G0964 Fragaria x ananassa
FAN09G1540 Fragaria x ananassa
FAN09G4798 Fragaria x ananassa
FAN13G0159 Fragaria x ananassa
FAN18G0817 Fragaria x ananassa
FvH4_5g01250 Fragaria vesca
Glyma.01G214700 Glycine max
Glyma.03G264902 Glycine max
Glyma.03G265002 Glycine max
Glyma.04G257602 Glycine max
Glyma.11G000066 Glycine max
Glyma.11G000132 Glycine max
Glyma.11G027200 Glycine max
Gohir.A08G177400 Gossypium hirsutum
Gohir.A09G193500 Gossypium hirsutum
Gohir.A11G021100 Gossypium hirsutum
Gohir.D08G195800 Gossypium hirsutum
Gohir.D09G187700 Gossypium hirsutum
Gohir.D11G020800 Gossypium hirsutum
Gorai.004G206500 Gossypium raimondii
Gorai.006G210500 Gossypium raimondii
Gorai.007G022100 Gossypium raimondii
GSVIVG01019881001 Vitis vinifera
HanXRQChr02g0043491 Helianthus annuus
HanXRQChr02g0043501 Helianthus annuus
HanXRQChr11g0336621 Helianthus annuus
Haze_08980 Corylus avellana
Hma1.2p1_0138F.1_g062730 Hydrangea macrophylla
HPP92_022000 Vanilla planifolia
Hund11535 Selenicereus undatus
Hund14708 Selenicereus undatus
Lalb_Chr05g0214741 Lupinus albus
Lalb_Chr09g0324691 Lupinus albus
Lalb_Chr16g0379941 Lupinus albus
Lalb_Chr16g0379951 Lupinus albus
Lj2C200G2 Lonicera japonica
Lj2C201G3 Lonicera japonica
Lj2g0004762 Lotus japonicus
Lj8A241G19 Lonicera japonica
Lsat_1_v5_gn_6_10400 Lactuca sativa
Lsat_1_v5_gn_6_79100 Lactuca sativa
Manes.01G069600 Manihot esculenta
Manes.02G030300 Manihot esculenta
Mapoly0108s0010 Marchantia polymorpha
MBI04_g06622_MAGBIO Magnolia biondii
MBI11_g05095_MAGBIO Magnolia biondii
MBI18_g34832_MAGBIO Magnolia biondii
MCO06G239 Micromonas commoda
MD04G1069800 Malus domestica
MD04G1069900 Malus domestica
MD06G1071200 Malus domestica
MD06G1071400 Malus domestica
Medtr5g011090 Medicago truncatula
MELO3C003304.2 Cucumis melo
MELO3C005619.2 Cucumis melo
Migut.A00905 Erythranthe guttata
Migut.A00906 Erythranthe guttata
Migut.E01161 Erythranthe guttata
Nitab4.5_0001714g0090 Nicotiana tabacum
Nitab4.5_0008362g0010 Nicotiana tabacum
Nn1g01292 Nelumbo nucifera
Nn6g34315 Nelumbo nucifera
Oeu001902.1 Olea europaea
Oeu059050.1 Olea europaea
Os06g0712400 Oryza sativa ssp. japonica
Peaxi162Scf00620g00617 Petunia axillaris
PGR031G2775 Punica granatum
PGSC0003DMG400022735 Solanum tuberosum
Phvul.002G153200 Phaseolus vulgaris
Potri.001G112300 Populus trichocarpa
Potri.003G119800 Populus trichocarpa
Pp3c12_2860 Physcomitrium patens
Pp3c17_3230 Physcomitrium patens
PRCOL_00006333 Prasinoderma coloniale
Prupe.5G088000 Prunus persica
Psat2g107120 Pisum sativum
Psat2g181120 Pisum sativum
PSO170G2389 Papaver somniferum
PSO302G0081 Papaver somniferum
PSO478G1498 Papaver somniferum
PSO782G1906 Papaver somniferum
QL12p016621 Quercus lobata
RcHm_v2.0_Chr1g0379891 Rosa chinensis
RcHm_v2.0_Chr7g0199771 Rosa chinensis
Rhsim11G0008000 Rhododendron simsii
Rhsim11G0008100 Rhododendron simsii
Sabra01G0085800 Salix brachista
Sabra03G0084000 Salix brachista
SalBow1G6995 Salvia bowleyana
SalBow6G3358 Salvia bowleyana
Sc07g0009480 Simmondsia chinensis
Sed0009929 Sechium edule
Sed0023838 Sechium edule
SEGI_34401 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35980 Striga asiatica
SGA_v2.0_scaffold286G47125 Striga asiatica
SHI13491 Sapria himalayana
SMO367G0360 Selaginella moellendorffii
Sopen08g028470 Solanum pennellii
Sp6g05610 Schrenkiella parvula
Sp7g21050 Schrenkiella parvula
TAR636G0614 Trochodendron aralioides
TAR636G1472 Trochodendron aralioides
TAR636G1874 Trochodendron aralioides
TAR636G3266 Trochodendron aralioides
THA.LOC104806361 Tarenaya hassleriana
THA.LOC104814202 Tarenaya hassleriana
Thecc.03G268500 Theobroma cacao
Thhalv10027519m.g Eutrema salsugineum
Thhalv10028490m.g Eutrema salsugineum
TPR.G14842 Trifolium pratense
TPR.G19581 Trifolium pratense
TWI15G1193 Tripterygium wilfordii
TWI81G0612 Tripterygium wilfordii
unitig_699.g19759 Utricularia gibba
vmacro00214 Vaccinium macrocarpon
VMungo1215G1985 Vigna mungo
VMungo1383G1658 Vigna mungo
Zm00001eb033290 Zea mays
Zm00001eb227790 Zea mays
Zm00001eb272510 Zea mays

User provided reference genes

Program Settings