Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25330 Brassica napus
A05p05670 Brassica napus
A10p00210 Brassica napus
Aa31LG1G11180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2273 Anthoceros agrestis
Actinidia12727 Actinidia chinensis
Actinidia25377 Actinidia chinensis
Actinidia32923 Actinidia chinensis
Actinidia33442 Actinidia chinensis
Actinidia38291 Actinidia chinensis
Ah.05g176080 Amaranthus hybridus
AL1G10490 Arabidopsis lyrata
AL4G44910 Arabidopsis lyrata
Aqoxy7G00446 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.831W35 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1D52P Arachis hypogaea
AT1G01830 Arabidopsis thaliana
AT2G45720 Arabidopsis thaliana
ATR0757G140 Amborella trichopoda
Atru.chr5.408 Acer truncatum
AUR62022741 Chenopodium quinoa
BcaB01g03256 Brassica carinata
BcaB02g09017 Brassica carinata
BcaB03g13618 Brassica carinata
BcaB03g13620 Brassica carinata
BcaB03g13621 Brassica carinata
BcaC01g05109 Brassica carinata
BcaC02g12191 Brassica carinata
BolC3t15373H Brassica oleracea
BolC4t22285H Brassica oleracea
BolC5t28813H Brassica oleracea
BraA03t11739Z Brassica rapa
BraA05t19538Z Brassica rapa
BraA10t42300Z Brassica rapa
C03p30230 Brassica napus
C03p30240 Brassica napus
C04p06630 Brassica napus
C05p00240 Brassica napus
CAN.G170.48 Capsicum annuum
CAN.G668.12 Capsicum annuum
CANSAT56G1460 Cannabis sativa
CARHR000500 Cardamine hirsuta
CARHR140960 Cardamine hirsuta
Carub.0001s0038 Capsella rubella
Carub.0004s2838 Capsella rubella
Ca_07863_v3 Cicer arietinum L.
Ca_23764_v3 Cicer arietinum L.
Cc02_g37270 Coffea canephora
CDE02G1166 Ceratophyllum demersum
CDE11G0907 Ceratophyllum demersum
Ciclev10019530m.g Citrus clementina
CiPaw.01G054100 Carya illinoinensis
CiPaw.02G025000 Carya illinoinensis
ClCG06G000080 Citrullus lanatus
COL.COLO4_12620 Corchorus olitorius
Cpa.g.sc18.193 Carica papaya
CsaV3_3G009280 Cucumis sativus L.
CsaV3_6G005820 Cucumis sativus L.
CSS0001436 Camellia sinensis var. sinensis
CSS0006224 Camellia sinensis var. sinensis
CSS0026727 Camellia sinensis var. sinensis
DCAR_006908 Daucus carota
DCAR_008589 Daucus carota
DCAR_016005 Daucus carota
DCAR_025168 Daucus carota
Dinv32426 Davidia involucrata
Dinv43760 Davidia involucrata
Duzib133G1567 Durio zibethinus
Duzib138G0708 Durio zibethinus
ECA236G2381 Erigeron canadensis
ECA240G4808 Erigeron canadensis
EL10Ac1g00981 Beta vulgaris
Eucgr.D02240 Eucalyptus grandis
Eucgr.E00215 Eucalyptus grandis
FAN01G2298 Fragaria x ananassa
FAN03G2727 Fragaria x ananassa
FAN06G3807 Fragaria x ananassa
FAN06G3943 Fragaria x ananassa
FAN10G0565 Fragaria x ananassa
FAN10G3637 Fragaria x ananassa
FvH4_7g13170 Fragaria vesca
Glyma.03G017100 Glycine max
Glyma.07G078200 Glycine max
Glyma.09G264600 Glycine max
Glyma.18G227400 Glycine max
Gohir.A11G085100 Gossypium hirsutum
Gohir.A12G103900 Gossypium hirsutum
Gohir.D08G150800 Gossypium hirsutum
Gohir.D11G089200 Gossypium hirsutum
Gohir.D12G107350 Gossypium hirsutum
Gorai.004G156500 Gossypium raimondii
Gorai.007G095200 Gossypium raimondii
Gorai.008G116900 Gossypium raimondii
GSVIVG01027519001 Vitis vinifera
HanXRQChr03g0093551 Helianthus annuus
HanXRQChr04g0121801 Helianthus annuus
Haze_15221 Corylus avellana
Hma1.2p1_0398F.1_g143880 Hydrangea macrophylla
HPP92_015046 Vanilla planifolia
HPP92_022031 Vanilla planifolia
Hund27323 Selenicereus undatus
Lalb_Chr10g0097491 Lupinus albus
Lalb_Chr19g0127111 Lupinus albus
Lj1g0009283 Lotus japonicus
Lj3g0011074 Lotus japonicus
Lj7C519T6 Lonicera japonica
Lj9E577T0 Lonicera japonica
Lj9P577T25 Lonicera japonica
Lsat_1_v5_gn_3_135740 Lactuca sativa
Lsat_1_v5_gn_7_5921 Lactuca sativa
Manes.01G262000 Manihot esculenta
Manes.05G039900 Manihot esculenta
Mapoly0059s0060 Marchantia polymorpha
MBI04_g35780_MAGBIO Magnolia biondii
MBI12_g31186_MAGBIO Magnolia biondii
MBI15_g10495_MAGBIO Magnolia biondii
MBI15_g33086_MAGBIO Magnolia biondii
MD01G1051300 Malus domestica
Medtr7g076220 Medicago truncatula
Medtr8g032570 Medicago truncatula
MELO3C006148.2 Cucumis melo
MELO3C022530.2 Cucumis melo
Migut.B01692 Erythranthe guttata
MSTRG.20795 Avicennia marina
Nitab4.5_0002718g0010 Nicotiana tabacum
Nitab4.5_0004550g0060 Nicotiana tabacum
Nn1g01358 Nelumbo nucifera
Oeu024410.1 Olea europaea
Oeu024412.1 Olea europaea
Oeu025068.2 Olea europaea
Oeu058606.2 Olea europaea
Oeu059233.1 Olea europaea
Os03g0116900 Oryza sativa ssp. japonica
Os10g0522601 Oryza sativa ssp. japonica
Peaxi162Scf00021g00064 Petunia axillaris
PGR031G0682 Punica granatum
PGR042G2831 Punica granatum
PGSC0003DMG400027764 Solanum tuberosum
Phvul.008G071700 Phaseolus vulgaris
Phvul.010G092100 Phaseolus vulgaris
Potri.002G153700 Populus trichocarpa
Potri.014G076500 Populus trichocarpa
Pp3c14_6300 Physcomitrium patens
Pp3c17_11760 Physcomitrium patens
Pp3c17_11764 Physcomitrium patens
Pp3c1_27190 Physcomitrium patens
Pp3c2_15540 Physcomitrium patens
Prupe.2G155000 Prunus persica
Psat3g113240 Pisum sativum
Psat4g199280 Pisum sativum
PSO478G3591 Papaver somniferum
PSO782G2974 Papaver somniferum
QL08p050579 Quercus lobata
RcHm_v2.0_Chr1g0352331 Rosa chinensis
Rhsim01G0154600 Rhododendron simsii
Rhsim07G0020800 Rhododendron simsii
Sabra02G0121800 Salix brachista
Sabra14G0055700 Salix brachista
SalBow3G2146 Salvia bowleyana
SalBow4G2769 Salvia bowleyana
Sc02g0002200 Simmondsia chinensis
Sc23g0003260 Simmondsia chinensis
Sed0003646 Sechium edule
Sed0004904 Sechium edule
Sed0013255 Sechium edule
Sed0022908 Sechium edule
SEGI_14099 Sequoiadendron giganteum
SGA_v2.0_scaffold142G35695 Striga asiatica
SGA_v2.0_scaffold153G37070 Striga asiatica
SGA_v2.0_scaffold540G52804 Striga asiatica
SGA_v2.0_scaffold540G52808 Striga asiatica
SMO347G0222 Selaginella moellendorffii
SMO347G0609 Selaginella moellendorffii
Solyc01g091740.4 Solanum lycopersicum
Sopen01g037520 Solanum pennellii
Sp1g00450 Schrenkiella parvula
Sp4g27770 Schrenkiella parvula
TAR374G1300 Trochodendron aralioides
TAR375G0524 Trochodendron aralioides
TAR629G0250 Trochodendron aralioides
TAR636G0933 Trochodendron aralioides
THA.LOC104802011 Tarenaya hassleriana
THA.LOC104814093 Tarenaya hassleriana
Thecc.01G368200 Theobroma cacao
Thhalv10001387m.g Eutrema salsugineum
Thhalv10007207m.g Eutrema salsugineum
TPR.G17602 Trifolium pratense
TPR.G37857 Trifolium pratense
TWI14G0610 Tripterygium wilfordii
TWI23G0836 Tripterygium wilfordii
TWI59G0102 Tripterygium wilfordii
unitig_0.g1285 Utricularia gibba
unitig_22.g5364 Utricularia gibba
unitig_61.g26401 Utricularia gibba
vmacro13335 Vaccinium macrocarpon
vmacro20969 Vaccinium macrocarpon
VMungo0331G1950 Vigna mungo
VMungo1383G0510 Vigna mungo
Zm00001eb001150 Zea mays
Zm00001eb021400 Zea mays

User provided reference genes

Program Settings