Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p18620 Brassica napus
A08p18890 Brassica napus
Aa31LG2G19240 Aethionema arabicum
Aa31LG7G12420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2658 Anthoceros agrestis
Actinidia05692 Actinidia chinensis
Actinidia05693 Actinidia chinensis
Actinidia23641 Actinidia chinensis
Ah.04g153280 Amaranthus hybridus
Ah.13g075260 Amaranthus hybridus
AL4G14680 Arabidopsis lyrata
AL7G20980 Arabidopsis lyrata
Aqoxy7G04165 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1UP6DU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BPJ3T6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GT9AC6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VG6M53 Arachis hypogaea
AT2G24330 Arabidopsis thaliana
AT4G31080 Arabidopsis thaliana
ATR0693G374 Amborella trichopoda
ATR0796G223 Amborella trichopoda
Atru.chr12.1549 Acer truncatum
Atru.chr7.1018 Acer truncatum
Atru.chr7.2716 Acer truncatum
AUR62032666 Chenopodium quinoa
AUR62035301 Chenopodium quinoa
BcaB03g12675 Brassica carinata
BcaC01g01114 Brassica carinata
BcaC02g08477 Brassica carinata
BolC3t21138H Brassica oleracea
BolC4t26942H Brassica oleracea
BraA04t17473Z Brassica rapa
BraA08t33850Z Brassica rapa
C03p88290 Brassica napus
C04p53940 Brassica napus
CAN.G256.18 Capsicum annuum
CAN.G744.15 Capsicum annuum
CAN.G963.1 Capsicum annuum
CANSAT25G0033 Cannabis sativa
CANSAT25G1032 Cannabis sativa
CARHR117760 Cardamine hirsuta
CARHR238990 Cardamine hirsuta
Carub.0004s0366 Capsella rubella
Carub.0007s0944 Capsella rubella
Ca_12882_v3 Cicer arietinum L.
Ca_15680_v3 Cicer arietinum L.
CBR_g54778 Chara braunii
Cc01_g06730 Coffea canephora
Cfa013246 Carpinus fangiana
Ciclev10011811m.g Citrus clementina
Ciclev10011920m.g Citrus clementina
CiPaw.07G214900 Carya illinoinensis
CiPaw.08G017500 Carya illinoinensis
ClCG05G017420 Citrullus lanatus
COL.COLO4_18634 Corchorus olitorius
Cpa.g.sc148.16 Carica papaya
Cre03.g161750 Chlamydomonas reinhardtii
CsaV3_3G046920 Cucumis sativus L.
CSS0026000 Camellia sinensis var. sinensis
DCAR_019594 Daucus carota
DCAR_021019 Daucus carota
Dinv06253 Davidia involucrata
Dinv09239 Davidia involucrata
Dinv09240 Davidia involucrata
Dinv37392 Davidia involucrata
Duzib150G0378 Durio zibethinus
Duzib168G0939 Durio zibethinus
ECA234G4150 Erigeron canadensis
ECA236G1370 Erigeron canadensis
ECA240G4580 Erigeron canadensis
EL10Ac3g06791 Beta vulgaris
Eucgr.D01078 Eucalyptus grandis
FAN15G1275 Fragaria x ananassa
FAN24G1616 Fragaria x ananassa
FvH4_2g30651 Fragaria vesca
Glyma.04G074400 Glycine max
Glyma.06G075600 Glycine max
Glyma.11G175328 Glycine max
Glyma.14G132600 Glycine max
Glyma.17G201100 Glycine max
Gohir.A06G108000 Gossypium hirsutum
Gohir.A13G181800 Gossypium hirsutum
Gohir.D06G110100 Gossypium hirsutum
Gohir.D13G185500 Gossypium hirsutum
Gorai.010G125100 Gossypium raimondii
Gorai.013G211500 Gossypium raimondii
GSVIVG01003918001 Vitis vinifera
GSVIVG01006883001 Vitis vinifera
GSVIVG01022781001 Vitis vinifera
HanXRQChr03g0079191 Helianthus annuus
HanXRQChr10g0304871 Helianthus annuus
HanXRQChr13g0388911 Helianthus annuus
HanXRQChr13g0388921 Helianthus annuus
HanXRQChr15g0494411 Helianthus annuus
HanXRQChr17g0548841 Helianthus annuus
Haze_21690 Corylus avellana
Hma1.2p1_0080F.1_g042200 Hydrangea macrophylla
Hma1.2p1_1544F.1_g289870 Hydrangea macrophylla
HPP92_002548 Vanilla planifolia
HPP92_008558 Vanilla planifolia
Hund19250 Selenicereus undatus
Hund24844 Selenicereus undatus
Lalb_Chr08g0243641 Lupinus albus
Lalb_Chr11g0064081 Lupinus albus
Lalb_Chr14g0362171 Lupinus albus
Lalb_Chr23g0268911 Lupinus albus
Lalb_Chr24g0402411 Lupinus albus
Lj1g0002631 Lotus japonicus
Lj2A622G59 Lonicera japonica
Lj2A622T60 Lonicera japonica
Lj2C622G5 Lonicera japonica
Lj5g0000952 Lotus japonicus
Lsat_1_v5_gn_5_127401 Lactuca sativa
Lsat_1_v5_gn_7_103361 Lactuca sativa
Lsat_1_v5_gn_9_99280 Lactuca sativa
Manes.01G174800 Manihot esculenta
Manes.07G090400 Manihot esculenta
Manes.16G138400 Manihot esculenta
Mapoly0023s0021 Marchantia polymorpha
MBI16_g23305_MAGBIO Magnolia biondii
MBI18_g03888_MAGBIO Magnolia biondii
MD08G1133800 Malus domestica
MD15G1110400 Malus domestica
Medtr1g010010 Medicago truncatula
Medtr3g108690 Medicago truncatula
MELO3C003645.2 Cucumis melo
Migut.K00422 Erythranthe guttata
MSTRG.10658 Avicennia marina
Nitab4.5_0000299g0150 Nicotiana tabacum
Nitab4.5_0002974g0070 Nicotiana tabacum
Nitab4.5_0010241g0010 Nicotiana tabacum
Nitab4.5_0011301g0030 Nicotiana tabacum
Nn7g36616 Nelumbo nucifera
Nn7g37407 Nelumbo nucifera
Oeu000723.1 Olea europaea
Oeu000724.1 Olea europaea
Oeu014728.1 Olea europaea
Oeu061897.1 Olea europaea
Os02g0631000 Oryza sativa ssp. japonica
Os04g0672900 Oryza sativa ssp. japonica
Peaxi162Scf00033g00092 Petunia axillaris
Peaxi162Scf00263g00042 Petunia axillaris
PGR044G0019 Punica granatum
PGSC0003DMG400002450 Solanum tuberosum
PGSC0003DMG400024848 Solanum tuberosum
Phvul.001G057800 Phaseolus vulgaris
Phvul.009G100100 Phaseolus vulgaris
Potri.006G281200 Populus trichocarpa
Potri.006G281400 Populus trichocarpa
Pp3c1_30990 Physcomitrium patens
Pp3c2_6330 Physcomitrium patens
Pp3c2_6336 Physcomitrium patens
Prupe.1G462700 Prunus persica
Psat5g025840 Pisum sativum
Psat6g031880 Pisum sativum
PSO210G3455 Papaver somniferum
PSO447G0312 Papaver somniferum
QL12p024649 Quercus lobata
RcHm_v2.0_Chr6g0312251 Rosa chinensis
Rhsim04G0219000 Rhododendron simsii
Rhsim08G0224200 Rhododendron simsii
Rhsim13G0137200 Rhododendron simsii
Sabra06G0217300 Salix brachista
Sabra06G0217400 Salix brachista
Sabra06G0217500 Salix brachista
SalBow1G6495 Salvia bowleyana
SalBow6G3063 Salvia bowleyana
Sc13g0002750 Simmondsia chinensis
Sc19g0005970 Simmondsia chinensis
Sed0011155 Sechium edule
Sed0022904 Sechium edule
SEGI_37153 Sequoiadendron giganteum
SGA_v2.0_scaffold464G52005 Striga asiatica
SGA_v2.0_scaffold63G21827 Striga asiatica
SMO367G0325 Selaginella moellendorffii
Solyc04g064810.4 Solanum lycopersicum
Solyc06g054650.3 Solanum lycopersicum
Sopen04g026770 Solanum pennellii
Sopen06g009630 Solanum pennellii
Sopen06g019710 Solanum pennellii
Sp4g03330 Schrenkiella parvula
Sp7g28960 Schrenkiella parvula
TAR362G1099 Trochodendron aralioides
TAR362G1253 Trochodendron aralioides
THA.LOC104803575 Tarenaya hassleriana
THA.LOC104819916 Tarenaya hassleriana
Thecc.09G002000 Theobroma cacao
Thhalv10000179m.g Eutrema salsugineum
Thhalv10025341m.g Eutrema salsugineum
TPR.G12121 Trifolium pratense
TPR.G12507 Trifolium pratense
TWI32G0035 Tripterygium wilfordii
TWI63G1568 Tripterygium wilfordii
unitig_748.g7169 Utricularia gibba
vmacro00794 Vaccinium macrocarpon
vmacro07258 Vaccinium macrocarpon
VMungo0647G2491 Vigna mungo
VMungo1309G1009 Vigna mungo
Zm00001eb066590 Zea mays
Zm00001eb185310 Zea mays
Zm00001eb247840 Zea mays

User provided reference genes

Program Settings