Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p16460 Brassica napus
A08p16480 Brassica napus
A08p24070 Brassica napus
Aa31LG2G15560 Aethionema arabicum
Aa31LG2G15610 Aethionema arabicum
Aa31LG6G16490 Aethionema arabicum
Actinidia00607 Actinidia chinensis
Actinidia20495 Actinidia chinensis
Ah.01g008950 Amaranthus hybridus
Ah.01g022740 Amaranthus hybridus
AL7G10580 Arabidopsis lyrata
AL7G16290 Arabidopsis lyrata
AL7G16300 Arabidopsis lyrata
Aqoxy6G02212 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I96A70 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y66AIQ Arachis hypogaea
AT4G34920 Arabidopsis thaliana
AT4G34930 Arabidopsis thaliana
AT4G38690 Arabidopsis thaliana
ATR0810G165 Amborella trichopoda
Atru.chr5.3270 Acer truncatum
AUR62010073 Chenopodium quinoa
AUR62013065 Chenopodium quinoa
BcaB03g11800 Brassica carinata
BcaB03g11801 Brassica carinata
BcaB03g12219 Brassica carinata
BcaC01g00249 Brassica carinata
BcaC01g00860 Brassica carinata
BcaC01g00862 Brassica carinata
BolC3t19978H Brassica oleracea
BolC3t20821H Brassica oleracea
BolC3t20822H Brassica oleracea
BraA08t33615Z Brassica rapa
BraA08t33616Z Brassica rapa
BraA08t34363Z Brassica rapa
C03p77240 Brassica napus
C03p85310 Brassica napus
C03p85320 Brassica napus
CAN.G143.33 Capsicum annuum
CAN.G588.40 Capsicum annuum
CAN.G588.42 Capsicum annuum
CANSAT25G1312 Cannabis sativa
CARHR243190 Cardamine hirsuta
CARHR243200 Cardamine hirsuta
CARHR294410 Cardamine hirsuta
Carub.0007s0056 Capsella rubella
Carub.0007s0538 Capsella rubella
Ca_15307_v3 Cicer arietinum L.
Ca_19042_v3 Cicer arietinum L.
Cc10_g02080 Coffea canephora
CDE02G0882 Ceratophyllum demersum
Cfa005213 Carpinus fangiana
Ciclev10028852m.g Citrus clementina
CiPaw.05G079200 Carya illinoinensis
ClCG02G011700 Citrullus lanatus
COL.COLO4_17297 Corchorus olitorius
Cpa.g.sc37.174 Carica papaya
Cpa.g.sc37.175 Carica papaya
CsaV3_2G015840 Cucumis sativus L.
CSS0023936 Camellia sinensis var. sinensis
CSS0049098 Camellia sinensis var. sinensis
DCAR_022950 Daucus carota
Dinv04951 Davidia involucrata
Duzib052G0294 Durio zibethinus
Duzib132G0388 Durio zibethinus
Duzib248G1002 Durio zibethinus
ECA233G2371 Erigeron canadensis
ECA246G5059 Erigeron canadensis
ECA248G0621 Erigeron canadensis
EL10Ac9g21415 Beta vulgaris
Eucgr.A02216 Eucalyptus grandis
Eucgr.G01767 Eucalyptus grandis
Eucgr.I01392 Eucalyptus grandis
FAN01G2042 Fragaria x ananassa
FAN01G2842 Fragaria x ananassa
FAN07G1744 Fragaria x ananassa
FAN12G3977 Fragaria x ananassa
FAN17G2534 Fragaria x ananassa
FAN20G0638 Fragaria x ananassa
FAN20G0757 Fragaria x ananassa
FvH4_2g02060 Fragaria vesca
FvH4_4g21970 Fragaria vesca
Glyma.06G004800 Glycine max
Glyma.11G105700 Glycine max
Glyma.12G030600 Glycine max
Gohir.A03G203900 Gossypium hirsutum
Gohir.A12G038500 Gossypium hirsutum
Gohir.D02G225200 Gossypium hirsutum
Gohir.D12G033800 Gossypium hirsutum
Gorai.005G253000 Gossypium raimondii
Gorai.008G034800 Gossypium raimondii
GSVIVG01024060001 Vitis vinifera
HanXRQChr15g0478591 Helianthus annuus
HanXRQChr15g0478621 Helianthus annuus
HanXRQChr15g0478631 Helianthus annuus
HanXRQChr15g0478671 Helianthus annuus
HanXRQChr17g0557611 Helianthus annuus
Haze_02175 Corylus avellana
Haze_02182 Corylus avellana
Hma1.2p1_0159F.1_g070360 Hydrangea macrophylla
HPP92_009028 Vanilla planifolia
HPP92_009064 Vanilla planifolia
HPP92_009077 Vanilla planifolia
Lalb_Chr01g0001701 Lupinus albus
Lalb_Chr23g0265071 Lupinus albus
Lj1g0000785 Lotus japonicus
Lj3g0021511 Lotus japonicus
Lj5P183T45 Lonicera japonica
Lj6C167T0 Lonicera japonica
Lj6C167T1 Lonicera japonica
Lj6P173T17 Lonicera japonica
Lj6P173T20 Lonicera japonica
Lj9P390T56 Lonicera japonica
Lsat_1_v5_gn_3_46100 Lactuca sativa
Lsat_1_v5_gn_8_124940 Lactuca sativa
Manes.11G082579 Manihot esculenta
Mapoly0074s0014 Marchantia polymorpha
MBI09_g09405_MAGBIO Magnolia biondii
MD05G1115500 Malus domestica
MD05G1118000 Malus domestica
MD10G1118000 Malus domestica
MD10G1121000 Malus domestica
Medtr1g060050 Medicago truncatula
Medtr1g060090 Medicago truncatula
Medtr4g073920 Medicago truncatula
MELO3C020798.2 Cucumis melo
Migut.B00103 Erythranthe guttata
MSTRG.20010 Avicennia marina
Nitab4.5_0000956g0070 Nicotiana tabacum
Nitab4.5_0001889g0160 Nicotiana tabacum
Nitab4.5_0001891g0130 Nicotiana tabacum
Nitab4.5_0003837g0010 Nicotiana tabacum
Nitab4.5_0005328g0040 Nicotiana tabacum
Nn1g05918 Nelumbo nucifera
Nn5g29110 Nelumbo nucifera
Nn7g37030 Nelumbo nucifera
Oeu008312.1 Olea europaea
Oeu063294.1 Olea europaea
Os09g0535900 Oryza sativa ssp. japonica
Peaxi162Scf00042g02718 Petunia axillaris
Peaxi162Scf00362g00941 Petunia axillaris
PGR042G2632 Punica granatum
PGR142G0899 Punica granatum
PGSC0003DMG400001621 Solanum tuberosum
PGSC0003DMG400001622 Solanum tuberosum
PGSC0003DMG400023210 Solanum tuberosum
PGSC0003DMG400023211 Solanum tuberosum
Phvul.009G025300 Phaseolus vulgaris
Phvul.011G033650 Phaseolus vulgaris
Potri.004G172000 Populus trichocarpa
Potri.009G131600 Populus trichocarpa
Pp3c10_14070 Physcomitrium patens
Pp3c12_26160 Physcomitrium patens
Pp3c6_26390 Physcomitrium patens
Prupe.8G160300 Prunus persica
Prupe.8G162500 Prunus persica
Psat5g002440 Pisum sativum
Psat7g174800 Pisum sativum
Psat7g174840 Pisum sativum
PSO541G4678 Papaver somniferum
PSO675G6157 Papaver somniferum
QL11p048579 Quercus lobata
QL11p049161 Quercus lobata
RcHm_v2.0_Chr6g0244491 Rosa chinensis
RcHm_v2.0_Chr6g0245281 Rosa chinensis
Rhsim05G0062200 Rhododendron simsii
Rhsim11G0190500 Rhododendron simsii
Sabra04G0114300 Salix brachista
Sabra09G0102000 Salix brachista
SalBow1G7742 Salvia bowleyana
Sc05g0005480 Simmondsia chinensis
Sed0011058 Sechium edule
Sed0017096 Sechium edule
SEGI_32743 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20407 Striga asiatica
SHI28041 Sapria himalayana
SHI35023 Sapria himalayana
SMO164G0040 Selaginella moellendorffii
Solyc01g111250.3 Solanum lycopersicum
Solyc01g111260.2 Solanum lycopersicum
Solyc10g055240.2 Solanum lycopersicum
Sopen01g053320 Solanum pennellii
Sopen01g053330 Solanum pennellii
Sopen10g025060 Solanum pennellii
Sp7g32670 Schrenkiella parvula
Sp7g32680 Schrenkiella parvula
Sp7g37100 Schrenkiella parvula
TAR628G1657 Trochodendron aralioides
THA.LOC104804093 Tarenaya hassleriana
THA.LOC104807789 Tarenaya hassleriana
Thecc.02G064200 Theobroma cacao
Thhalv10025285m.g Eutrema salsugineum
Thhalv10025752m.g Eutrema salsugineum
Thhalv10025753m.g Eutrema salsugineum
TPR.G19914 Trifolium pratense
TPR.G38466 Trifolium pratense
TPR.G38484 Trifolium pratense
TWI31G0377 Tripterygium wilfordii
unitig_0.g826 Utricularia gibba
vmacro17369 Vaccinium macrocarpon
VMungo1127G2236 Vigna mungo
VMungo1309G1156 Vigna mungo
Zm00001eb103680 Zea mays
Zm00001eb319820 Zea mays

User provided reference genes

Program Settings