Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p20080 Brassica napus
Aa31LG1G29430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1564 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1973 Anthoceros agrestis
Actinidia00720 Actinidia chinensis
Actinidia05732 Actinidia chinensis
Actinidia05733 Actinidia chinensis
Actinidia21086 Actinidia chinensis
Actinidia23602 Actinidia chinensis
Actinidia23603 Actinidia chinensis
Actinidia24304 Actinidia chinensis
Actinidia24865 Actinidia chinensis
Ah.06g194760 Amaranthus hybridus
AL4G47610 Arabidopsis lyrata
Aqoxy5G00577 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5QD0EV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5HKCU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LDUN37 Arachis hypogaea
AT2G48010 Arabidopsis thaliana
ATR0580G022 Amborella trichopoda
Atru.chr5.1320 Acer truncatum
AUR62000216 Chenopodium quinoa
AUR62006561 Chenopodium quinoa
BcaB01g03845 Brassica carinata
BcaC01g05663 Brassica carinata
BolC3t14748H Brassica oleracea
BraA03t11258Z Brassica rapa
C03p23520 Brassica napus
CAN.G1172.5 Capsicum annuum
CAN.G1682.8 Capsicum annuum
CANSAT25G0670 Cannabis sativa
CARHR143400 Cardamine hirsuta
Carub.0004s3073 Capsella rubella
Ca_08552_v3 Cicer arietinum L.
Ca_08586_v3 Cicer arietinum L.
Ca_10391_v3 Cicer arietinum L.
Cc01_g19920 Coffea canephora
Cc02_g32460 Coffea canephora
CDE02G4796 Ceratophyllum demersum
CDE09G0371 Ceratophyllum demersum
Cfa006070 Carpinus fangiana
Cfa006527 Carpinus fangiana
Ciclev10003528m.g Citrus clementina
Ciclev10023732m.g Citrus clementina
Ciclev10024255m.g Citrus clementina
CiPaw.07G013000 Carya illinoinensis
CiPaw.07G096800 Carya illinoinensis
CiPaw.07G096900 Carya illinoinensis
CiPaw.07G097100 Carya illinoinensis
ClCG09G006710 Citrullus lanatus
COL.COLO4_09153 Corchorus olitorius
COL.COLO4_13551 Corchorus olitorius
Cpa.g.sc9.138 Carica papaya
CsaV3_1G012960 Cucumis sativus L.
CSS0005438 Camellia sinensis var. sinensis
CSS0008061 Camellia sinensis var. sinensis
CSS0021862 Camellia sinensis var. sinensis
CSS0023721 Camellia sinensis var. sinensis
CSS0024403 Camellia sinensis var. sinensis
CSS0028404 Camellia sinensis var. sinensis
CSS0040493 Camellia sinensis var. sinensis
DCAR_002766 Daucus carota
DCAR_002767 Daucus carota
DCAR_002768 Daucus carota
DCAR_002769 Daucus carota
DCAR_002770 Daucus carota
DCAR_005827 Daucus carota
DCAR_018380 Daucus carota
Dinv11272 Davidia involucrata
Dinv22918 Davidia involucrata
Duzib128G1066 Durio zibethinus
Duzib138G0059 Durio zibethinus
ECA247G2237 Erigeron canadensis
ECA247G2999 Erigeron canadensis
EL10Ac4g10092 Beta vulgaris
Eucgr.H01603 Eucalyptus grandis
Eucgr.H04437 Eucalyptus grandis
FAN02G1461 Fragaria x ananassa
FAN05G1605 Fragaria x ananassa
FAN05G4458 Fragaria x ananassa
FAN14G4207 Fragaria x ananassa
FAN14G5301 Fragaria x ananassa
FAN15G2702 Fragaria x ananassa
FAN20G3019 Fragaria x ananassa
FvH4_2g24291 Fragaria vesca
FvH4_6g05000 Fragaria vesca
FvH4_6g05020 Fragaria vesca
Glyma.02G150600 Glycine max
Glyma.03G149000 Glycine max
Glyma.10G023400 Glycine max
Glyma.19G152200 Glycine max
Glyma.19G152300 Glycine max
Gohir.A08G184600 Gossypium hirsutum
Gohir.A08G184700 Gossypium hirsutum
Gohir.A11G119401 Gossypium hirsutum
Gohir.A11G261200 Gossypium hirsutum
Gohir.A11G261300 Gossypium hirsutum
Gohir.A12G007000 Gossypium hirsutum
Gohir.D08G202956 Gossypium hirsutum
Gohir.D08G202970 Gossypium hirsutum
Gohir.D11G271366 Gossypium hirsutum
Gohir.D11G271400 Gossypium hirsutum
Gohir.D12G006400 Gossypium hirsutum
Gorai.004G214700 Gossypium raimondii
Gorai.004G214800 Gossypium raimondii
Gorai.007G133100 Gossypium raimondii
Gorai.007G292000 Gossypium raimondii
Gorai.007G292100 Gossypium raimondii
Gorai.008G006500 Gossypium raimondii
GSVIVG01011046001 Vitis vinifera
HanXRQChr10g0283001 Helianthus annuus
HanXRQChr15g0466541 Helianthus annuus
Haze_04258 Corylus avellana
Haze_04780 Corylus avellana
Hma1.2p1_0257F.1_g103980 Hydrangea macrophylla
HPP92_016863 Vanilla planifolia
HPP92_016864 Vanilla planifolia
HPP92_016874 Vanilla planifolia
HPP92_016924 Vanilla planifolia
Lalb_Chr01g0020271 Lupinus albus
Lalb_Chr06g0163221 Lupinus albus
Lalb_Chr21g0306641 Lupinus albus
Lj1C42T5 Lonicera japonica
Lj1g0027768 Lotus japonicus
Lj5g0019972 Lotus japonicus
Lsat_1_v5_gn_9_1760 Lactuca sativa
Manes.05G071200 Manihot esculenta
Manes.08G124400 Manihot esculenta
Mapoly0094s0064 Marchantia polymorpha
MBI19_g27935_MAGBIO Magnolia biondii
MBI19_g27936_MAGBIO Magnolia biondii
MBI19_g27938_MAGBIO Magnolia biondii
MD03G1272600 Malus domestica
MD04G1211500 Malus domestica
MD11G1293500 Malus domestica
MD12G1226500 Malus domestica
Medtr1g089600 Medicago truncatula
Medtr7g094100 Medicago truncatula
MELO3C005042.2 Cucumis melo
Migut.D01001 Erythranthe guttata
MSTRG.18206 Avicennia marina
Nitab4.5_0001323g0160 Nicotiana tabacum
Nn4g26112 Nelumbo nucifera
Oeu001448.1 Olea europaea
Oeu011184.1 Olea europaea
Os01g0384300 Oryza sativa ssp. japonica
Peaxi162Scf00006g00402 Petunia axillaris
Peaxi162Scf01039g00236 Petunia axillaris
PGR031G3260 Punica granatum
PGR119G0564 Punica granatum
PGSC0003DMG400044745 Solanum tuberosum
Phvul.001G146900 Phaseolus vulgaris
Phvul.001G147001 Phaseolus vulgaris
Phvul.007G168100 Phaseolus vulgaris
Potri.005G040200 Populus trichocarpa
Potri.013G028000 Populus trichocarpa
Potri.014G136400 Populus trichocarpa
Potri.014G136466 Populus trichocarpa
Pp3c23_14220 Physcomitrium patens
Pp3c8_25270 Physcomitrium patens
Prupe.6G332100 Prunus persica
Prupe.6G332200 Prunus persica
Prupe.8G248800 Prunus persica
Psat3g066760 Pisum sativum
Psat6g169680 Pisum sativum
PSO210G7090 Papaver somniferum
QL12p023087 Quercus lobata
RcHm_v2.0_Chr3g0453511 Rosa chinensis
RcHm_v2.0_Chr3g0453521 Rosa chinensis
RcHm_v2.0_Chr6g0292151 Rosa chinensis
Rhsim01G0278100 Rhododendron simsii
Sabra14G0102900 Salix brachista
SalBow3G4619 Salvia bowleyana
Sc17g0003860 Simmondsia chinensis
Sc17g0003890 Simmondsia chinensis
Sed0015258 Sechium edule
Sed0017761 Sechium edule
SEGI_02439 Sequoiadendron giganteum
SEGI_02847 Sequoiadendron giganteum
SEGI_12482 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05782 Striga asiatica
SMO118G0551 Selaginella moellendorffii
SMO367G0661 Selaginella moellendorffii
Solyc09g074240.1 Solanum lycopersicum
Sopen09g029060 Solanum pennellii
Sp4g18630 Schrenkiella parvula
TAR362G1332 Trochodendron aralioides
TAR633G1170 Trochodendron aralioides
TAR633G2737 Trochodendron aralioides
THA.LOC104807107 Tarenaya hassleriana
Thecc.01G286700 Theobroma cacao
Thecc.05G298400 Theobroma cacao
Thecc.05G298500 Theobroma cacao
Thhalv10016382m.g Eutrema salsugineum
TPR.G16926 Trifolium pratense
TPR.G32803 Trifolium pratense
TPR.G39952 Trifolium pratense
TWI12G1425 Tripterygium wilfordii
TWI14G1430 Tripterygium wilfordii
TWI56G1013 Tripterygium wilfordii
TWI59G0058 Tripterygium wilfordii
VMungo0720G2241 Vigna mungo
VMungo1383G1639 Vigna mungo
VMungo1383G2340 Vigna mungo
Zm00001eb231410 Zea mays

User provided reference genes

Program Settings